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cytoscan™ high density microarray analysis  (Thermo Fisher)


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    Thermo Fisher cytoscan™ high density microarray analysis
    Cytoscan™ High Density Microarray Analysis, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/high-density+microarray+analysis/pm26762690-59-49-54
    Average 90 stars, based on 1 article reviews
    cytoscan™ high density microarray analysis - by Bioz Stars, 2026-09
    90/100 stars

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    Article Title: Wide allelic heterogeneity with predominance of large IDS gene complex rearrangements in a sample of Mexican patients with Hunter syndrome.
    Article Snippet: Precise breakpoints were not sequenced. eInitially identified by null amplification of the IDSP1 locus in the PCR-RFLP HinfI assay (4) and absence of PCR fragments of the nine IDS exons, with or without the presence of the GCC 5′ UTR AFF2 fragment (NCBI Probe: Pr012387296) and subsequently corroborated by CytoScanTM High Density microarray analysis (Affymetrix, Inc.) according to USCS genome browser (GRCh37 hg19 reference sequence coordinates). fSemi-quantitative PCR was employed to determine IDS gene dosage for exons 4 and 8; DMD exon 3 was employed as an internal non-deleted control (12). gIn addition, the obligate carrier status was confirmed by an IDS/IDSP1 inversion heterozygous pattern in the PCR-RFLP HinfI restriction assay (4) and sequencing of the 3682 bp 2F/8R PCR chimeric IDS-IDSP1 allele-derived fragment (GenBank Accession: KT724868.1). hBy reverse-transcription of IDS mRNA blood-derived sample followed by PCR and automated sequencing. sequencing of four overlapping fragments that encompassed the entire coding sequence of IDS isoform ‘a’ (NM_000202.6, primers and conditions are available upon request).

    Article Title: Rare copy number alterations and copy-neutral loss of heterozygosity revealed in ameloblastomas by high-density whole-genome microarray analysis.
    Article Snippet: BACKGROUND: Ameloblastoma (unycistic, UA, or multicystic, MA) is a rare tumor associated to bone destruction and facial deformity.. Its malignant counterpart is the ameloblastic carcinoma (AC).. The BRAFV600E mutation is highly prevalent in all these tumors subtypes and cannot account for their different clinical behaviors.

    Article Title: Wide allelic heterogeneity with predominance of large IDS gene complex rearrangements in a sample of Mexican patients with Hunter syndrome.
    Article Snippet: The genomic DNA samples of these patients were subsequently analyzed with a CytoScanTM High Density Microarray (Affymetrix, Inc., Santa Clara, CA, USA) (7, 15).

    Article Title: A novel large deletion of the CYLD gene causes CYLD cutaneous syndrome in a Chinese family
    Article Snippet: To validate the CNV detected in the CYLD gene (NCBI Reference Sequence: NG_012061.1), the microarray analysis was performed using high‐density CytoScan microarray (Affymetrix, USA).

    Peptide Mass Fingerprinting:

    Article Title: Genomic Characteristics of Myeloproliferative Neoplasms in Patients Exposed to Ionizing Radiation following the Chernobyl Nuclear Accident
    Article Snippet: .. Copy-number alterations and copy-neutral loss of heterozygosity (cnLOH) were assessed on the PBMC DNA from 30 PMF patients using the high-density CytoScan HD microarray platform (Affymetrix, Santa Clara, CA, US), which includes 2.67 million probes. ..

    Microarray:

    Article Title: Genomic Characteristics of Myeloproliferative Neoplasms in Patients Exposed to Ionizing Radiation following the Chernobyl Nuclear Accident
    Article Snippet: .. Copy-number alterations and copy-neutral loss of heterozygosity (cnLOH) were assessed on the PBMC DNA from 30 PMF patients using the high-density CytoScan HD microarray platform (Affymetrix, Santa Clara, CA, US), which includes 2.67 million probes. ..



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