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Epigenomics ag chip-seq data encode
Chip Seq Data Encode, supplied by Epigenomics ag, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/encode+chip-seq+data/chip+seq/pmc04747527-163-4-8
Average 90 stars, based on 1 article reviews
chip-seq data encode - by Bioz Stars, 2026-09
90/100 stars

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Article Title: GeneSetCart: assembling, augmenting, combining, visualizing, and analyzing gene sets
Article Snippet: Such gene sets can be differentially expressed 50 genes from transcriptomics studies such as RNA-seq, targets of transcription factors from 51 epigenomics experiments such as ChIP-seq, protein complexes from mass-spectrometry 52 proteomics, genes that harbor mutations or deletions that lead to a human or a mouse phenotype 53 from genomics studies, genes belonging to a pathway or a biological process based on literature 54 curation, or marker genes that define specific cell types within a tissue [3].

Article Title: Functional variant rs9344 at 11q13.3 regulates CCND1 expression in multiple myeloma with t(11;14).
Article Snippet: Putative regulatory variants were identified by utilizing peaks from public ChIP-seq and ATAC-seq repositories of MM and healthy immune samples from the Roadmap Epigenomics Consortium (Supplementary Table 2) [16–19].

Article Title: Atlas of imprinted and allele-specific DNA methylation in the human body.
Article Snippet: For our analysis of IGF2 (Fig. 8), ChIP-seq from Roadmap Epigenomics’ Adult Liver was used (H3K27ac and H3K4me1 from Donor 3, DNA_Lib 1057)69, as well as chromHMM primary annotations for Adult Liver70.

Article Title: GeneSetCart: assembling, augmenting, combining, visualizing, and analyzing gene sets
Article Snippet: Such gene sets can be differentially expressed genes from transcriptomics studies such as RNA-seq, targets of transcription factors from epigenomics experiments such as ChIP-seq, protein complexes from mass-spectrometry proteomics, genes that harbor mutations or deletions that lead to human or mouse phenotypes from genomics studies, genes belonging to a pathway or a biological process based on literature curation, or marker genes that define specific cell types within a tissue [3].

Article Title: Variant-to-function approaches for adipose tissue: Insights into cardiometabolic disorders
Article Snippet: , Roadmap Epigenomics , SAT , ChIP-seq, DNase-seq , Roadmap Epigenomics Consortium .

Article Title: The long antisense non-coding RNA HOXA transcript at the distal tip (LncRNA HOTTIP) in health and disease: a comprehensive review and in silico analysis.
Article Snippet: Epigenomics: ChIP-seq can identify HOTTIP’s role in recruiting chromatin-modifying complexes, such as WDR5/MLL1, to activate oncogenic HOXA genes (Ka et al. 2022).

Article Title: GeneSetCart: assembling, augmenting, combining, visualizing, and analyzing gene sets
Article Snippet: Such gene sets can be differentially expressed genes from transcriptomics studies such as RNA-seq, targets of transcription factors from epigenomics experiments such as ChIP-seq, protein complexes from mass-spectrometry proteomics, genes that harbor mutations or deletions that lead to a human or a mouse phenotype from genomics studies, genes belonging to a pathway or a biological process based on literature curation, or marker genes that define specific cell types within a tissue [3].

Sequencing:

Article Title: Sex differences in mitochondrial gene expression during viral myocarditis.
Article Snippet: .. Hearts representing mean myocarditis inflammation scores for each group were chosen for ChIPseq and sent to the Mayo Clinic Epigenomics and Sequencing Core. ..



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