Journal: Frontiers in Microbiology
Article Title: A novel GntR-ABC efflux system mediates oxidative stress response, drug resistance, motility and virulence in Acinetobacter baumannii ATCC 17978
doi: 10.3389/fmicb.2026.1748186
Figure Lengend Snippet: Characterization of the operon encoding the GntR-ABC efflux system in A. baumannii ATCC 17978. (A) Schematic representation of the GntR-ABC operon and surrounding gene cluster in the A. baumannii ATCC 17978 genome. Small arrows indicate the oligonucleotides used for RT-PCR analysis. The intergenic region between the AUO97_RS16335 and AUO97_RS16340 (241 bp) corresponds to the putative promoter region. Distances between adjacent protein-coding sequences within the operon are as follows: RS16340-RS16345 , 28 bp; RS16345-RS16350 , 74 bp; RS16350-RS16355 , 19 bp; RS16355-RS16360 , 34 bp; and RS16360-RS16365 , 16 bp. (B) RT-PCR amplifications of the indicated intergenic regions showed (small black arrows). Each primer pair was used in PCR reactions containing cDNA, RNA (negative control), or genomic DNA (positive control) from A. baumannii ATCC 17978 WT as templates. V Ladder (NzyTech) was used as the DNA size marker (M). (C) Representative EMSA of purified GntR protein and digoxigenin-labeled DNA probe containing the AUO97_RS16335-RS16340 intergenic region. Competition assays were performed using 10-fold excess of unlabeled specific DNA as competitor.
Article Snippet: The GntR transcriptional regulator gene ( AUO97_RS16340 ) was amplified from the chromosomal DNA of A. baumannii ATCC 17978 WT by PCR using gene-specific primers ( ) to generate an N-terminal 6 × His-tagged construct.
Techniques: Reverse Transcription Polymerase Chain Reaction, Negative Control, Positive Control, Marker, Purification, Labeling