mya 4773 t  (ATCC)

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: List of Aspergillus species and strains used in this study. Accessions numbers of ITS and tub2 are provided.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: General statistics of the Aspergillus affinis CMG 70 genome assembly, and gene prediction.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Statistical results of repetitive sequences and noncoding RNAs for the Aspergillus affinis CMG 70 genome. SINEs: short interspersed nuclear elements; LINEs: long interspersed nuclear elements; LTRs: long terminal repeats.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Gene Ontology (GO) functional annotation (pie charts) and EggNOG functional classification (bars charts) of the Aspergillus affinis CMG 70 genome.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques: Functional Assay

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Genes predicted to code for transporters in the genome of Aspergillus affinis CMG 70.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Comparison of three biosynthetic gene regions in Aspergillus affinis strains CMG 70 and ATCC MYA-4773 T with: ( A ) Notoamide BGC of Aspergillus versicolor NRRL 35600; ( B ) Ochrindole A BGC of Aspergillus steynii IBT 23096; and ( C ) NG-391 BGC of Metarhizium anisopliae ARSEF 2575. The genes encoding hypothetical proteins are represented as white arrows. The square box shows the missing genes in relation to the A. affinis cluster.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques: Comparison

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Principal Component Analysis (PCA) scores plot of salted and non-salted extracts of Aspergillus affinis CMG 70. Green represents salted extracts and in red non-salted extracts.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Structural classification of up and down regulated ( p < 0.01) metabolites produced by Aspergillus affinis CMG 70, grown in the presence of sea salt, in comparison to A. affinis CMG 70, grown in the absence of sea salt.

Article Snippet: When observing the predicted BGCs of the two strains of A. affinis (CMG 70 and ATCC MYA-4773 T ) ( ) we were able to detect some differences in the diversity of the BGCs present: the AbT1, biotin and epipyriculol BGCs were detected only in CMG 70, while curvupallide-B, neurosporin A, solanapyrone D and ucs1025a in ATCC MYA-4773 T . Furthermore, we found that the NG-391 BGC was exclusive of A. affinis suggesting that this cluster region is species specific.

Techniques: Produced, Comparison

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: List of Aspergillus species and strains used in this study. Accessions numbers of ITS and tub2 are provided.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: General statistics of the Aspergillus affinis CMG 70 genome assembly, and gene prediction.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Statistical results of repetitive sequences and noncoding RNAs for the Aspergillus affinis CMG 70 genome. SINEs: short interspersed nuclear elements; LINEs: long interspersed nuclear elements; LTRs: long terminal repeats.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Gene Ontology (GO) functional annotation (pie charts) and EggNOG functional classification (bars charts) of the Aspergillus affinis CMG 70 genome.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques: Functional Assay

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Genes predicted to code for transporters in the genome of Aspergillus affinis CMG 70.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Comparison of three biosynthetic gene regions in Aspergillus affinis strains CMG 70 and ATCC MYA-4773 T with: ( A ) Notoamide BGC of Aspergillus versicolor NRRL 35600; ( B ) Ochrindole A BGC of Aspergillus steynii IBT 23096; and ( C ) NG-391 BGC of Metarhizium anisopliae ARSEF 2575. The genes encoding hypothetical proteins are represented as white arrows. The square box shows the missing genes in relation to the A. affinis cluster.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques: Comparison

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Principal Component Analysis (PCA) scores plot of salted and non-salted extracts of Aspergillus affinis CMG 70. Green represents salted extracts and in red non-salted extracts.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Structural classification of up and down regulated ( p < 0.01) metabolites produced by Aspergillus affinis CMG 70, grown in the presence of sea salt, in comparison to A. affinis CMG 70, grown in the absence of sea salt.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques: Produced, Comparison

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Metabolites with biotechnological potential of Aspergillus affinis CMG70 belonging to various chemical classes and related functions. Metabolites were annotated at MSI-level 2. m/z —ratio mass/charge detected; Rt—retention time (min). PubChem was used for class identification.

Article Snippet: Aspergillus affinis CMG 70 contains 8.9% fewer BGCs than A. affinis ATCC MYA-4773 T ( , ).

Techniques: Activity Assay

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: List of Aspergillus species and strains used in this study. Accessions numbers of ITS and tub2 are provided.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: General statistics of the Aspergillus affinis CMG 70 genome assembly, and gene prediction.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Statistical results of repetitive sequences and noncoding RNAs for the Aspergillus affinis CMG 70 genome. SINEs: short interspersed nuclear elements; LINEs: long interspersed nuclear elements; LTRs: long terminal repeats.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Gene Ontology (GO) functional annotation (pie charts) and EggNOG functional classification (bars charts) of the Aspergillus affinis CMG 70 genome.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques: Functional Assay

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Genes predicted to code for transporters in the genome of Aspergillus affinis CMG 70.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Comparison of three biosynthetic gene regions in Aspergillus affinis strains CMG 70 and ATCC MYA-4773 T with: ( A ) Notoamide BGC of Aspergillus versicolor NRRL 35600; ( B ) Ochrindole A BGC of Aspergillus steynii IBT 23096; and ( C ) NG-391 BGC of Metarhizium anisopliae ARSEF 2575. The genes encoding hypothetical proteins are represented as white arrows. The square box shows the missing genes in relation to the A. affinis cluster.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques: Comparison

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Principal Component Analysis (PCA) scores plot of salted and non-salted extracts of Aspergillus affinis CMG 70. Green represents salted extracts and in red non-salted extracts.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques:

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Structural classification of up and down regulated ( p < 0.01) metabolites produced by Aspergillus affinis CMG 70, grown in the presence of sea salt, in comparison to A. affinis CMG 70, grown in the absence of sea salt.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques: Produced, Comparison

Journal: Journal of Fungi

Article Title: Genome and Metabolome MS-Based Mining of a Marine Strain of Aspergillus affinis

doi: 10.3390/jof7121091

Figure Lengend Snippet: Metabolites with biotechnological potential of Aspergillus affinis CMG70 belonging to various chemical classes and related functions. Metabolites were annotated at MSI-level 2. m/z —ratio mass/charge detected; Rt—retention time (min). PubChem was used for class identification.

Article Snippet: Aspergillus affinis , ATCC MYA-4773 , Leaf Litter , MN431360 , GU721092.

Techniques: Activity Assay