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lrse st5  (ATCC)


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    Structured Review

    ATCC lrse st5
    Lrse St5, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/80098/yWXD954/pmc11972906__ic___57___161___s004-22-160-331
    Average 92 stars, based on 5 article reviews
    lrse st5 - by Bioz Stars, 2026-11
    92/100 stars

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    Related Articles

    In Vitro:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria
    Article Snippet: .. The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%. .. The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%.

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria
    Article Snippet: .. The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%. ..

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria
    Article Snippet: .. Percentage of in vitro-cleaved transcripts containing helix 9 of 23S rRNA using E. coli and R. capsulatus RNases III at 130 mM and 250 mM KCla Strain (lane nos. in Fig. 3) % Transcript cleaved in vitro using: RNase IIIEc with: RNase IIIRc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 a The reported values are the average of two experiments; the values did not deviate by more than 15%. on M arch 22, 2015 by guest http://jb.asm .org/ At the 39-processing site in helix 9 of the R. capsulatus 37b4 transcript two scissile bonds were cleaved by RNase IIIRc in vitro, but only the upstream one was detected in vivo (Fig. 4A and Fig. 5A). .. The primer extension analysis also confirmed the existence of multiple scissile bonds in the B. henselae ATCC 49882 transcript.

    Histone Deacetylase Assay:

    Article Title: Linezolid-Resistant Coagulase-Negative Staphylococci in a Tertiary Hospital: Molecular Epidemiology, Clinical Characteristics, and Outcomes
    Article Snippet: .. EQW00_03715EQW00_03720 EQW00_03715EQW00_03720 773356 Intergenic region All LRSE ST5 773380 C A M EQW00_03720 EQW00_03720 724 Val242Leu NAD-dependent protein deacetylase All LRSE ST5 773381 A G S EQW00_03720 EQW00_03720 723 Ile241Ile NAD-dependent protein deacetylase All LRSE ST5 773397 C T M EQW00_03720 EQW00_03720 707 Ser236Asn NAD-dependent protein deacetylase All LRSE ST5 773510 T C S EQW00_03720 EQW00_03720 594 Gln198Gln NAD-dependent protein deacetylase All LRSE ST5 773543 C T S EQW00_03720 EQW00_03720 561 Thr187Thr NAD-dependent protein deacetylase All LRSE ST5 775640 C T S lacA EQW00_03730 112 Leu38Leu Galactose-6-phosphate isomerase subunit LacA All LRSE ST5 777619 C A M lacD EQW00_03745 184 Gln62Lys Tagatose-bisphosphate aldolase All LRSE ST5 779050 A G M EQW00_03755 EQW00_03755 298 Thr100Ala PTS lactose transporter subunit IIBC All LRSE ST5 782531 A C M EQW00_03765 EQW00_03765 335 Asn112Thr Alpha/beta hydrolase All LRSE ST5 784478 G A M EQW00_03775 EQW00_03775 178 Val60Ile NADP-dependent oxidoreductase All LRSE ST5 789200 T A M EQW00_03800 EQW00_03800 1395 Glu465Asp Sialic acid synthase All LRSE ST5 800980 C A S EQW00_03850 EQW00_03850 336 Thr112Thr Metal-dependent hydrolase All LRSE ST5 805725 G A M EQW00_03875 EQW00_03875 124 Glu42Lys DHA2 family efflux MFS transporter permease subunit All LRSE ST5 806206 G A M EQW00_03875 EQW00_03875 605 Arg202Lys DHA2 family efflux MFS transporter permease subunit All LRSE ST5 808240 C T M EQW00_03880 EQW00_03880 1049 Ala350Val Chromosome partitioning protein ParA All LRSE ST5 815807 C A M EQW00_03935 EQW00_03935 698 Thr233Lys YbbR-like domain- containing protein All LRSE ST5 817976 A T I EQW00_03940-glmS EQW00_03940- EQW00_03945 817976 Intergenic region All LRSE ST5 823834 T G M EQW00_03965 EQW00_03965 933 Glu311Asp Cation transporter All LRSE ST5 824779 C A M EQW00_03970 EQW00_03970 319 Ala107Ser Transcriptional regulator All LRSE ST5 1689512 A C M RsmB EQW00_08160 520 Pro174Thr 16S rRNA (cytosine(967)-C(5))methyltransferase All LRSE ST5 1688317 T (+GC) Ins RlmN EQW00_08160 402 STOP 23S rRNA (adenine(2503)-C(2))methyltransferase LRSE ST5 Ru USA 1688701 A (+A) Ins RlmN EQW00_08160 14 STOP 23S rRNA (adenine(2503)-C(2))methyltransferase LRSE ST5 Austria Note: *Position in reference genome Staphylococcus epidermidis strain ATCC 14990 (CP035288.1). ..

    In Vivo:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria
    Article Snippet: .. Percentage of in vitro-cleaved transcripts containing helix 9 of 23S rRNA using E. coli and R. capsulatus RNases III at 130 mM and 250 mM KCla Strain (lane nos. in Fig. 3) % Transcript cleaved in vitro using: RNase IIIEc with: RNase IIIRc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 a The reported values are the average of two experiments; the values did not deviate by more than 15%. on M arch 22, 2015 by guest http://jb.asm .org/ At the 39-processing site in helix 9 of the R. capsulatus 37b4 transcript two scissile bonds were cleaved by RNase IIIRc in vitro, but only the upstream one was detected in vivo (Fig. 4A and Fig. 5A). .. The primer extension analysis also confirmed the existence of multiple scissile bonds in the B. henselae ATCC 49882 transcript.



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    Models of potential secondary structure of helix 9 in the 23S rRNA primary transcript of the following strains (asterisks indicate sequences obtained from the data bank, the other sequences were determined in our laboratory, and EMBL accession numbers are in parentheses): A, R. rubrum DSM 107 (AJ251267); B, R. sphaeroides WS8 (AJ251261); C, R. sphaeroides 17023 (AJ251260); D, R. capsulatus B10 (AJ251256); E, R. capsulatus 37b4 (AJ251255); F, R. capsulatus DSM 938* (reference 11); G, R. palustris 5D (AJ251262); H, B. japonicum 110* (reference 17); I, B. bacilliformis KC 584* (reference 22); J, B. henselae ATCC 49882 (AJ251257); K, S. fredii MSDJ 1536 (AJ251258); L, R. giardinii H152 (AJ251263); M, R. <t>etli</t> CFN 42 (AJ251265); R. etli Viking I (AJ251266); O, <t>R.</t> <t>gallicum</t> R602 (AJ251259), R. leguminosarum ATCC 10004 (AJ251264). (B to F) Rhodobacter group of helices. Boxes with highly conservative base pair occupation, specific for this group, are indicated. The differences between the sequences shown in panels E and F are in boldface letters. (G to P) Rhizobium-Bradyrhizobium group of helices. Boxes with highly conservative base pair occupation, specific for this group, are indicated. In panels G and H, sequences of high similarity around the putative deletion and/or insertion site are underlined. Arrows indicate the approximate positions of the RNase III processing sites as determined by RNA fragment length estimation (Table ​(Table4).4). Arrows on the left side of the helices indicate 5′-processing sites; arrows on the right side of the helices indicate 3′-processing sites. Filled arrowheads indicate primary processing sites; empty arrowheads indicate secondary processing sites.
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    Image Search Results


    Models of potential secondary structure of helix 9 in the 23S rRNA primary transcript of the following strains (asterisks indicate sequences obtained from the data bank, the other sequences were determined in our laboratory, and EMBL accession numbers are in parentheses): A, R. rubrum DSM 107 (AJ251267); B, R. sphaeroides WS8 (AJ251261); C, R. sphaeroides 17023 (AJ251260); D, R. capsulatus B10 (AJ251256); E, R. capsulatus 37b4 (AJ251255); F, R. capsulatus DSM 938* (reference 11); G, R. palustris 5D (AJ251262); H, B. japonicum 110* (reference 17); I, B. bacilliformis KC 584* (reference 22); J, B. henselae ATCC 49882 (AJ251257); K, S. fredii MSDJ 1536 (AJ251258); L, R. giardinii H152 (AJ251263); M, R. etli CFN 42 (AJ251265); R. etli Viking I (AJ251266); O, R. gallicum R602 (AJ251259), R. leguminosarum ATCC 10004 (AJ251264). (B to F) Rhodobacter group of helices. Boxes with highly conservative base pair occupation, specific for this group, are indicated. The differences between the sequences shown in panels E and F are in boldface letters. (G to P) Rhizobium-Bradyrhizobium group of helices. Boxes with highly conservative base pair occupation, specific for this group, are indicated. In panels G and H, sequences of high similarity around the putative deletion and/or insertion site are underlined. Arrows indicate the approximate positions of the RNase III processing sites as determined by RNA fragment length estimation (Table ​(Table4).4). Arrows on the left side of the helices indicate 5′-processing sites; arrows on the right side of the helices indicate 3′-processing sites. Filled arrowheads indicate primary processing sites; empty arrowheads indicate secondary processing sites.

    Journal:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria

    doi:

    Figure Lengend Snippet: Models of potential secondary structure of helix 9 in the 23S rRNA primary transcript of the following strains (asterisks indicate sequences obtained from the data bank, the other sequences were determined in our laboratory, and EMBL accession numbers are in parentheses): A, R. rubrum DSM 107 (AJ251267); B, R. sphaeroides WS8 (AJ251261); C, R. sphaeroides 17023 (AJ251260); D, R. capsulatus B10 (AJ251256); E, R. capsulatus 37b4 (AJ251255); F, R. capsulatus DSM 938* (reference 11); G, R. palustris 5D (AJ251262); H, B. japonicum 110* (reference 17); I, B. bacilliformis KC 584* (reference 22); J, B. henselae ATCC 49882 (AJ251257); K, S. fredii MSDJ 1536 (AJ251258); L, R. giardinii H152 (AJ251263); M, R. etli CFN 42 (AJ251265); R. etli Viking I (AJ251266); O, R. gallicum R602 (AJ251259), R. leguminosarum ATCC 10004 (AJ251264). (B to F) Rhodobacter group of helices. Boxes with highly conservative base pair occupation, specific for this group, are indicated. The differences between the sequences shown in panels E and F are in boldface letters. (G to P) Rhizobium-Bradyrhizobium group of helices. Boxes with highly conservative base pair occupation, specific for this group, are indicated. In panels G and H, sequences of high similarity around the putative deletion and/or insertion site are underlined. Arrows indicate the approximate positions of the RNase III processing sites as determined by RNA fragment length estimation (Table ​(Table4).4). Arrows on the left side of the helices indicate 5′-processing sites; arrows on the right side of the helices indicate 3′-processing sites. Filled arrowheads indicate primary processing sites; empty arrowheads indicate secondary processing sites.

    Article Snippet: The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%.

    Techniques:

    Summary of the approximate lengths of the helix 9 containing transcripts from the strains studied here and the approximate lengths of the fragments arising after in vitro cleavage of these transcripts by RNases III from R. capsulatus and E. coli a

    Journal:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria

    doi:

    Figure Lengend Snippet: Summary of the approximate lengths of the helix 9 containing transcripts from the strains studied here and the approximate lengths of the fragments arising after in vitro cleavage of these transcripts by RNases III from R. capsulatus and E. coli a

    Article Snippet: The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%.

    Techniques: In Vitro

    Percentage of sequence identity found by comparison of the first 30 bp of the helix 9 of 23S rRNA of various bacterial strains a

    Journal:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria

    doi:

    Figure Lengend Snippet: Percentage of sequence identity found by comparison of the first 30 bp of the helix 9 of 23S rRNA of various bacterial strains a

    Article Snippet: The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%.

    Techniques: Sequencing

    GC content of helix 9 of 23S rRNA in comparison with the overall GC content of complete rrn operons or 23S rRNA

    Journal:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria

    doi:

    Figure Lengend Snippet: GC content of helix 9 of 23S rRNA in comparison with the overall GC content of complete rrn operons or 23S rRNA

    Article Snippet: The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%.

    Techniques:

    Percentage of in vitro-cleaved transcripts containing helix 9 of 23S rRNA using E. coli and R. capsulatus RNases III at 130 mM and 250 mM KCl a

    Journal:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria

    doi:

    Figure Lengend Snippet: Percentage of in vitro-cleaved transcripts containing helix 9 of 23S rRNA using E. coli and R. capsulatus RNases III at 130 mM and 250 mM KCl a

    Article Snippet: The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%.

    Techniques: In Vitro

    In vitro processing of transcripts containing helix 9 of 23S rRNA by R. capsulatus (Rc) and E. coli (Ec) RNase III at low and high monovalent ion concentrations. L, 130 mM KCl; H, 250 mM KCl; C, uncleaved substrate. Rp, R. palustris; Rc, R. capsulatus; Bh, B. henselae; Rhe, R. etli; Rs, R. sphaeroides; Rhgi, R. giardinii; Sf, S. fredi; Rhga, R. gallicum; Rhl, R. leguminosarum.

    Journal:

    Article Title: RNase III Processing of Intervening Sequences Found in Helix 9 of 23S rRNA in the Alpha Subclass of Proteobacteria

    doi:

    Figure Lengend Snippet: In vitro processing of transcripts containing helix 9 of 23S rRNA by R. capsulatus (Rc) and E. coli (Ec) RNase III at low and high monovalent ion concentrations. L, 130 mM KCl; H, 250 mM KCl; C, uncleaved substrate. Rp, R. palustris; Rc, R. capsulatus; Bh, B. henselae; Rhe, R. etli; Rs, R. sphaeroides; Rhgi, R. giardinii; Sf, S. fredi; Rhga, R. gallicum; Rhl, R. leguminosarum.

    Article Snippet: The results are shown in Table . table ft1 table-wrap mode="anchored" t5 TABLE 3 caption a7 Strain (lane nos. in Fig. ) % Transcript cleaved in vitro using: RNase III Ec with: RNase III Rc with: 130 mM KCl 250 mM KCl 130 mM KCl 250 mM KCl R. sphaeroides WS8 (21–25) 0 0 98 43 R. sphaeroides 17023 (56–58) 0 0 90 10 R. capsulatus B10 (46–50) 0 0 97 12 R. capsulatus 37b4 (6–10) 0 0 94 14 R. palustris 5D (1–5) 96 75 100 99 B. henselae ATCC 49882 (11–15) 97 70 99 96 S. fredii MSDJ 1536 (31–35) 2 1.5 100 100 R. giardinii H152 (26–30) 25 0 100 80 R. etli CFN42 (16–20) 10 0 99 99 R. etli Viking I (41–45) 80 0 98 99 R. gallicum R602 (36–40) 60 0 100 86 R. leguminosarum ATCC 10004 (51–55) 88 2 99 48 Open in a separate window a The reported values are the average of two experiments; the values did not deviate by more than 15%.

    Techniques: In Vitro