29342d  (ATCC)

Journal: Diagnostics

Article Title: Innovative DendrisChips ® Technology for a Syndromic Approach of In Vitro Diagnosis: Application to the Respiratory Infectious Diseases

doi: 10.3390/diagnostics8040077

Figure Lengend Snippet: Pathogen bacterial strains used to evaluate the specificity of the designed probes from hypervariable rDNA regions in their genomes.

Article Snippet: Mycoplasma pneumoniae , ATCC 29342D , ATCC *.

Techniques:

Journal: Diagnostics

Article Title: Innovative DendrisChips ® Technology for a Syndromic Approach of In Vitro Diagnosis: Application to the Respiratory Infectious Diseases

doi: 10.3390/diagnostics8040077

Figure Lengend Snippet: Pathogen bacterial strains used to evaluate the specificity of the designed probes from hypervariable rDNA regions in their genomes.

Article Snippet: Mycoplasma pneumoniae , ATCC 29342D , ATCC *.

Techniques:

Journal: Diagnostics

Article Title: Innovative DendrisChips ® Technology for a Syndromic Approach of In Vitro Diagnosis: Application to the Respiratory Infectious Diseases

doi: 10.3390/diagnostics8040077

Figure Lengend Snippet: Evaluation of the limit of detection (LOD) of the method and comparison with real-time PCR.

Article Snippet: Mycoplasma pneumoniae , ATCC 29342D , ATCC *.

Techniques: Comparison, Real-time Polymerase Chain Reaction

Journal: Diagnostics

Article Title: Innovative DendrisChips ® Technology for a Syndromic Approach of In Vitro Diagnosis: Application to the Respiratory Infectious Diseases

doi: 10.3390/diagnostics8040077

Figure Lengend Snippet: Two-dimensional projection of the hybridization profiles for 166 samples using canonical discriminant analysis. The samples that have been used to generate the training set are a combination of pure bacterial strains and clinical specimens in which bacterial species have been also identified by microbiological method. Bp, Bordetella pertussis ; Cpn, Chlamydiae pneumoniae ; Hi, Haemophilus influenzae ; Lpn, Legionella pneumophila ; Kpn, Klebsiella pneumoniae ; Mca, Moraxella catharralis ; Spn, Streptococcus pneumoniae ; Nm, Neisseria meningitidis ; Sau, Staphylococcus aureus ; Pa, Pseudomonas aeruginosa .

Article Snippet: Mycoplasma pneumoniae , ATCC 29342D , ATCC *.

Techniques: Hybridization

Journal: Diagnostics

Article Title: Innovative DendrisChips ® Technology for a Syndromic Approach of In Vitro Diagnosis: Application to the Respiratory Infectious Diseases

doi: 10.3390/diagnostics8040077

Figure Lengend Snippet: Probes patterns for the 11 pathogen bacteria obtained by random forests statistical analysis. The probes are ordinated in the X-axis by their importance value (Y-axis arbitrary unit) determined by the RF model as described in Materials and Methods. Bp, Bordetella pertussis ; Cpn, Chlamydiae pneumoniae ; Hi, Haemophilus influenzae ; Kpn, Klebsiella pneumoniae ; Lpn, Legionella pneumophila ; Mca, Moraxella catharralis ; Mpn, Mycoplasma pneumoniae ; Nm, Neisseria meningitidis ; Pa, Pseudomonas aeruginosa ; Sau, Staphylococcus aureus ; Spn, Streptococcus pneumoniae .

Article Snippet: Mycoplasma pneumoniae , ATCC 29342D , ATCC *.

Techniques: Bacteria

Journal: Diagnostics

Article Title: Innovative DendrisChips ® Technology for a Syndromic Approach of In Vitro Diagnosis: Application to the Respiratory Infectious Diseases

doi: 10.3390/diagnostics8040077

Figure Lengend Snippet: Venn diagram representation for the comparison of positive identification results for five pathogens between the DendrisChips ® technology and the conventional microbiology culture (microbio). In total, 238 samples consisting of 43 BAL, 43 sputums, 66 throat swabs, 33 naso-pharyngeal swabs, 15 ear swabs, 5 tongue swabs, 1 eye swab, 5 mouth swabs, 20 wound swabs, 6 bronchial aspirates and 1 tracheal aspirate have been used. Hi, Hemophillus influenza ; Pa, Pseudomonas aeruginosa ; Kpn, Klebsiella pneumoniae ; Mca, Moraxella catharralis ; Sau, Staphylococcus aureus .

Article Snippet: Mycoplasma pneumoniae , ATCC 29342D , ATCC *.

Techniques: Comparison