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national center for biotechnology information (ncbi)/genbank geo and arrayexpress databases  (Biotechnology Information)

 
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    Biotechnology Information national center for biotechnology information (ncbi)/genbank geo and arrayexpress databases
    National Center For Biotechnology Information (Ncbi)/Genbank Geo And Arrayexpress Databases, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/the+arrayexpress+database/national+center+for+biotechnology+information++ncbi+/pmc09316839-88-14-9
    Average 90 stars, based on 1 article reviews
    national center for biotechnology information (ncbi)/genbank geo and arrayexpress databases - by Bioz Stars, 2026-09
    90/100 stars

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    Article Title: Differential effects of antiemetic serotonin receptor antagonist Ondansetron on nausea associated with CHRM3 rs2165870 and TACR1 rs3755468 single-nucleotide polymorphisms
    Article Snippet: We searched the transcripts starting from around the SNP using the National Center for Biotechnology Information (NCBI) [ ].

    Article Title: Hereditary kidney disease with auditory abnormalities: analysis of mutations and clinical phenotypes.
    Article Snippet: For the diseases identified during this process, a more detailed literature review was conducted using the National Center for Biotechnology Information (NCBI) and Online Mendelian Inheritance in Man (OMIM) databases.

    Article Title: Is there a female-male self-selection bias in TSST-based reactive stress research?
    Article Snippet: Indeed, PUBMED and PsycINFO do not include articles beyond the scope of MEDLINE, PUBMED Central (PMC), the National Center for Biotechnology Information (NCBI), and APA PsycNET.

    Article Title: Nematocidal activity of the oomycete Lagenidium juracyae against pine wood nematode.
    Article Snippet: See the T erm s and C onditions (https://onlinelibrary.w iley.com /term s-and-conditions) on W iley O nline L ibrary for rules of use; O A articles are governed by the applicable C reative C om m ons L icense sequences of Lagenidium sp. NL03 under study were compared with those of other Lagenidium, Myzocytiopsis, Pythium, Paralagenidium, and Globisporangium sequences registered in the National Centre for Biotechnology Information (NCBI, www.ncbi. nlm.nih.gov/) database, and Achlya ambisexualis and Saprolegnia ferax were used as outgroups to construct a tree according to the neighbor-joining method, with 1000 bootstrap replications.29

    Article Title: Microbiota sequence variants of tumor-related antigenic epitopes
    Article Snippet: Annotation may be performed by a (BLAST-based) comparison against reference database, for example against the Kyoto Encyclopedia of Genes and Genomes (KEGG) and/or against the National Center for Biotechnology Information (NCBI) Reference Sequence Database (RefSeq).

    Article Title: Systems for production of products to promote nitrogen use efficiency in plants
    Article Snippet: Whole genome sequences from related strains and species were taken from the publicly available National Center for Biotechnology Information (NCBI) database, Genbank.

    Article Title: Wearable device for continuous monitoring of user health for accurate clinical outcomes and wellness programs
    Article Snippet: The platform dataset can be derived from National Center for Biotechnology Information (NCBI), European Molecular Biology Laboratory/European Bioinformatics Institute (EMBL-EB), MicrobeNet—Centers for Disease Control and Prevention (CDC), Pathosystems Resource Integration Center (PATRIC), Virus Pathogen Resources (ViPR), Fungi Database (FungiDB), and the Ensembl genome browser, which provide access to organized information from the analysis of biological data for prions, virus, bacteria, fungi, protists, and so on, and pollen data from National Centers for Environmental Information.

    Sequencing:

    Article Title: Evaluation of DNA barcoding reference databases for marine species in the western and central Pacific Ocean
    Article Snippet: .. Global databases like the National Center for Biotechnology Information (NCBI) , the European Nucleotide Archive (ENA) , and the DNA Data Bank of Japan (DDBJ) ( ) are widely used in DNA barcoding studies due to their extensive collections of publicly available sequence records contributed by researchers worldwide. ..



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    Chemokines expression level in tissue-specific macrophages (log 2 TPM) RNA-Seq datasets were collected from ArrayXpress of European Bioinformatics Institute, which stores data from high-throughput functional genomics experiments ( https://www.ebi.ac.uk/arrayexpress ). These data include information on the expression of T-cell costimulation receptors and coinhibition receptors through experiments submitted directly to ArrayXpress (PMID: 25480296). The red colour indicated log 2 TPM > 0, green colour background indicated log 2 TPM < 0.

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    doi: 10.1016/j.cjco.2024.11.018

    Figure Lengend Snippet: Chemokines expression level in tissue-specific macrophages (log 2 TPM) RNA-Seq datasets were collected from ArrayXpress of European Bioinformatics Institute, which stores data from high-throughput functional genomics experiments ( https://www.ebi.ac.uk/arrayexpress ). These data include information on the expression of T-cell costimulation receptors and coinhibition receptors through experiments submitted directly to ArrayXpress (PMID: 25480296). The red colour indicated log 2 TPM > 0, green colour background indicated log 2 TPM < 0.

    Article Snippet: In this study, data on chemokine ligands and receptors were obtained by mining public databases (the National Center of Biotechnology Information-Gene Expression Omnibus [NCBI-GEO] database, ArrayExpress database, and single-cell RNA sequencing [scRNA-seq] database), and an extensive literature search was performed.

    Techniques: Expressing, RNA Sequencing, High Throughput Screening Assay, Functional Assay