zen lite 3 4 9 software image processing computer software (Carl Zeiss)
96
Structured Review
Carl Zeiss
zen lite 3 4 9 software image processing computer software
Zen Lite 3 4 9 Software Image Processing Computer Software, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 96/100, based on 1043 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/software+processing+module/pmc10942853-93-17-28
Average 96 stars, based on 1043 article reviews
Zen Lite 3 4 9 Software Image Processing Computer Software, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 96/100, based on 1043 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/software+processing+module/pmc10942853-93-17-28
Average 96 stars, based on 1043 article reviews
zen lite 3 4 9 software image processing computer software - by Bioz Stars,
2026-09
96/100 stars
Images
Related Articles
Microscopy:Article Title: Therapeutic Potential of Mesenchymal Stem Cell and Tenocyte Secretomes for Tendon Repair: Proteomic Profiling and Functional Characterization In Vitro and In Ovo. Article Snippet: To detect proteoglycans, the sections were stained with 0.1% toluidine blue solution (Merck/Sigma-Aldrich, Buchs, Switzerland). .. Microscopic documentation was carried out using a Zeiss Axio Vert.A1 brightfield microscope with Article Title: Synergistic Effects of Insulin-like Growth Factor-1 and Platelet-Derived Growth Factor-BB in Tendon Healing. Article Snippet: .. On days 0 (EDD7), 2 (EDD9), 4 (EDD11), and 7 (EDD14), pictures were taken using a Zeiss Axio Vert.A1 brightfield microscope with Article Title: Intercellular adhesion molecule-1 protects against adipose tissue inflammation and insulin resistance but promotes liver inflammation and hepatic fibrosis in mice Article Snippet: .. Images were acquired using an Axioplan2 microscope (Carl Zeiss Microscopy, Oberkochen, Germany) and Software:Article Title: Therapeutic Potential of Mesenchymal Stem Cell and Tenocyte Secretomes for Tendon Repair: Proteomic Profiling and Functional Characterization In Vitro and In Ovo. Article Snippet: To detect proteoglycans, the sections were stained with 0.1% toluidine blue solution (Merck/Sigma-Aldrich, Buchs, Switzerland). .. Microscopic documentation was carried out using a Zeiss Axio Vert.A1 brightfield microscope with Article Title: Uncovering biomarkers for chronic toxoplasmosis detection highlights alternative pathways shaping parasite dormancy. Article Snippet: D. Soldati Mouse anti-HA Roche RRID: AB_2314622 Rabbit anti-HA Cell Signaling Technology RRID: AB_1549585 Rabbit polyclonal anti-QRS Antunes et al, 2024 Rabbit polyclonal anti-BCLA Dard et al, 2021 Mouse anti-FLAG Cell Signaling Technology Cat♯8146 Rabbit anti-FLAG Cell Signaling Technology RRID: AB_2798687 Rabbit polyclonal anti-BSM Eurogentec custom antibody Alexa Fluor 488 Recombinant Rabbit Monoclonal Antibody Invitrogen A11008 Alexa Fluor 488 Recombinant Mouse Monoclonal Antibody Invitrogen A11001 Alexa Fluor 594 Recombinant Rabbit Monoclonal Antibody Invitrogen A11012 Alexa Fluor 594 Recombinant Mouse Monoclonal Antibody Invitrogen A11005 Anti-Mouse IgG, AP Conjugate Promega S3721 Anti-Rabbit IgG, AP Conjugate Promega S3731 Anti-His-tag chimeric human monoclonal antibody Sigma-Aldrich SAB5600096 Anti-Mouse IgG (Fc specific)–Peroxidase antibody Sigma-Aldrich Cat# A0168 Anti-Human IgG (Fc specific)−Peroxidase antibody Sigma-Aldrich Cat# A0170 Oligonucleotides and other sequence-based reagents Oligonucleotide LIC-216140-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCtccgaagaccatccatgaatattcatgg Oligonucleotide LIC-216140-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCgccgtttatctcgaccacggatggcgg Oligonucleotide LIC-BSM-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCgatgaattaccccacagtgtgtggac Oligonucleotide LIC-BSM-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCagctgtgtgagaatgctgccgctcgg Oligonucleotide BSM-CRISP1-Fwd Sigma-Aldrich AAGTTGATGATACTCACTGCAGCTCG Oligonucleotide BSM-CRISP1-Rev Sigma-Aldrich AAAACGAGCTGCAGTGAGTATCATCA Oligonucleotide BSM-REV1-screen Sigma-Aldrich GAGCTGCAGTGAGTATCATC Oligonucleotide BSM-CRISP2-Fwd Sigma-Aldrich AAGTTGGAGGAAACTTTCAGCAAAGG Oligonucleotide BSM-CRISP2-Rev Sigma-Aldrich AAAACCTTTGCTGAAAGTTTCCTCCA Oligonucleotide BSM-REV2-screen Sigma-Aldrich CTTTGCTGAAAGTTTCCTCC Chemicals, enzymes, and other reagents Dulbecco’s modified Eagle’s medium Invitrogen Cat# 12491015 Fetal Bovine Serum Gibco 10270106 HEPES Gibco Cat# 15630056 L-glutamine Gibco 25030123 Pénicilline-streptomycine Gibco 15070063 Hank’s Balanced Salt Solution Gibco Cat# 14025-050 3-indoleacetic acid Sigma-Aldrich Cat# 45533 © The Author(s) EMBO Molecular Medicine 15 D ow nloaded from https://w w w .em bopress.org on M ay 22, 2025 from IP 66.96.225.158. .. Reagent/resource Reference or source Identifier or catalog number FR235222 Antunes et al, 2024 DMSO Sigma-Aldrich D2438 Bovine serum albumin Sigma-Aldrich A7030 Hoechst 33342 solution Invitrogen Cat# H1399 Complete EDTA free Roche 05056489001 NBT/BCIP 1-Step Thermo Fisher Scientific Cat# 34042 Coomassie blue R-250 Sigma-Aldrich (MERK) 1.12553.0025 TRIzol Thermo Fisher Scientific Cat# 15596026 Pyrimethamine Sigma-Aldrich (MERK) 46706 ESF921 media Expression System Cat # 96-001-01 Benzonase MERK Millipore Cat # 70746 Ni-NTA resin Qiagen Cat# 30210 SuperBlock blocking buffer Thermo Fisher Scientific Cat# 37515 Recombinant protein A/G peroxidase conjugated Thermo Fisher Scientific Cat# 32490 TMB Substrate Thermo Fisher Scientific Cat# 34029 Software Article Title: Synergistic Effects of Insulin-like Growth Factor-1 and Platelet-Derived Growth Factor-BB in Tendon Healing. Article Snippet: .. On days 0 (EDD7), 2 (EDD9), 4 (EDD11), and 7 (EDD14), pictures were taken using a Zeiss Axio Vert.A1 brightfield microscope with Article Title: A framework for evaluating predicted sperm trajectories in crowded microscopy videos Article Snippet: .. Videos were recorded continuously for two minutes at nine frames per second using Zeiss Article Title: FoxO3 controls cardiomyocyte proliferation and heart regeneration by regulating Sfrp2 expression in postnatal mice. Article Snippet: To quantify the cell size, 5 independent hearts per group (at least 300 cells) were captured near apex with laser-scanning confocal microscope (LSM 700, Zeiss). .. Article Title: Intercellular adhesion molecule-1 protects against adipose tissue inflammation and insulin resistance but promotes liver inflammation and hepatic fibrosis in mice Article Snippet: .. Images were acquired using an Axioplan2 microscope (Carl Zeiss Microscopy, Oberkochen, Germany) and Article Title: A framework for evaluating predicted sperm trajectories in crowded microscopy videos. Article Snippet: .. Videos were recorded continuously for two minutes at nine frames per second using Zeiss Blocking Assay:Article Title: Uncovering biomarkers for chronic toxoplasmosis detection highlights alternative pathways shaping parasite dormancy. Article Snippet: D. Soldati Mouse anti-HA Roche RRID: AB_2314622 Rabbit anti-HA Cell Signaling Technology RRID: AB_1549585 Rabbit polyclonal anti-QRS Antunes et al, 2024 Rabbit polyclonal anti-BCLA Dard et al, 2021 Mouse anti-FLAG Cell Signaling Technology Cat♯8146 Rabbit anti-FLAG Cell Signaling Technology RRID: AB_2798687 Rabbit polyclonal anti-BSM Eurogentec custom antibody Alexa Fluor 488 Recombinant Rabbit Monoclonal Antibody Invitrogen A11008 Alexa Fluor 488 Recombinant Mouse Monoclonal Antibody Invitrogen A11001 Alexa Fluor 594 Recombinant Rabbit Monoclonal Antibody Invitrogen A11012 Alexa Fluor 594 Recombinant Mouse Monoclonal Antibody Invitrogen A11005 Anti-Mouse IgG, AP Conjugate Promega S3721 Anti-Rabbit IgG, AP Conjugate Promega S3731 Anti-His-tag chimeric human monoclonal antibody Sigma-Aldrich SAB5600096 Anti-Mouse IgG (Fc specific)–Peroxidase antibody Sigma-Aldrich Cat# A0168 Anti-Human IgG (Fc specific)−Peroxidase antibody Sigma-Aldrich Cat# A0170 Oligonucleotides and other sequence-based reagents Oligonucleotide LIC-216140-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCtccgaagaccatccatgaatattcatgg Oligonucleotide LIC-216140-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCgccgtttatctcgaccacggatggcgg Oligonucleotide LIC-BSM-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCgatgaattaccccacagtgtgtggac Oligonucleotide LIC-BSM-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCagctgtgtgagaatgctgccgctcgg Oligonucleotide BSM-CRISP1-Fwd Sigma-Aldrich AAGTTGATGATACTCACTGCAGCTCG Oligonucleotide BSM-CRISP1-Rev Sigma-Aldrich AAAACGAGCTGCAGTGAGTATCATCA Oligonucleotide BSM-REV1-screen Sigma-Aldrich GAGCTGCAGTGAGTATCATC Oligonucleotide BSM-CRISP2-Fwd Sigma-Aldrich AAGTTGGAGGAAACTTTCAGCAAAGG Oligonucleotide BSM-CRISP2-Rev Sigma-Aldrich AAAACCTTTGCTGAAAGTTTCCTCCA Oligonucleotide BSM-REV2-screen Sigma-Aldrich CTTTGCTGAAAGTTTCCTCC Chemicals, enzymes, and other reagents Dulbecco’s modified Eagle’s medium Invitrogen Cat# 12491015 Fetal Bovine Serum Gibco 10270106 HEPES Gibco Cat# 15630056 L-glutamine Gibco 25030123 Pénicilline-streptomycine Gibco 15070063 Hank’s Balanced Salt Solution Gibco Cat# 14025-050 3-indoleacetic acid Sigma-Aldrich Cat# 45533 © The Author(s) EMBO Molecular Medicine 15 D ow nloaded from https://w w w .em bopress.org on M ay 22, 2025 from IP 66.96.225.158. .. Reagent/resource Reference or source Identifier or catalog number FR235222 Antunes et al, 2024 DMSO Sigma-Aldrich D2438 Bovine serum albumin Sigma-Aldrich A7030 Hoechst 33342 solution Invitrogen Cat# H1399 Complete EDTA free Roche 05056489001 NBT/BCIP 1-Step Thermo Fisher Scientific Cat# 34042 Coomassie blue R-250 Sigma-Aldrich (MERK) 1.12553.0025 TRIzol Thermo Fisher Scientific Cat# 15596026 Pyrimethamine Sigma-Aldrich (MERK) 46706 ESF921 media Expression System Cat # 96-001-01 Benzonase MERK Millipore Cat # 70746 Ni-NTA resin Qiagen Cat# 30210 SuperBlock blocking buffer Thermo Fisher Scientific Cat# 37515 Recombinant protein A/G peroxidase conjugated Thermo Fisher Scientific Cat# 32490 TMB Substrate Thermo Fisher Scientific Cat# 34029 Software Recombinant:Article Title: Uncovering biomarkers for chronic toxoplasmosis detection highlights alternative pathways shaping parasite dormancy. Article Snippet: D. Soldati Mouse anti-HA Roche RRID: AB_2314622 Rabbit anti-HA Cell Signaling Technology RRID: AB_1549585 Rabbit polyclonal anti-QRS Antunes et al, 2024 Rabbit polyclonal anti-BCLA Dard et al, 2021 Mouse anti-FLAG Cell Signaling Technology Cat♯8146 Rabbit anti-FLAG Cell Signaling Technology RRID: AB_2798687 Rabbit polyclonal anti-BSM Eurogentec custom antibody Alexa Fluor 488 Recombinant Rabbit Monoclonal Antibody Invitrogen A11008 Alexa Fluor 488 Recombinant Mouse Monoclonal Antibody Invitrogen A11001 Alexa Fluor 594 Recombinant Rabbit Monoclonal Antibody Invitrogen A11012 Alexa Fluor 594 Recombinant Mouse Monoclonal Antibody Invitrogen A11005 Anti-Mouse IgG, AP Conjugate Promega S3721 Anti-Rabbit IgG, AP Conjugate Promega S3731 Anti-His-tag chimeric human monoclonal antibody Sigma-Aldrich SAB5600096 Anti-Mouse IgG (Fc specific)–Peroxidase antibody Sigma-Aldrich Cat# A0168 Anti-Human IgG (Fc specific)−Peroxidase antibody Sigma-Aldrich Cat# A0170 Oligonucleotides and other sequence-based reagents Oligonucleotide LIC-216140-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCtccgaagaccatccatgaatattcatgg Oligonucleotide LIC-216140-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCgccgtttatctcgaccacggatggcgg Oligonucleotide LIC-BSM-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCgatgaattaccccacagtgtgtggac Oligonucleotide LIC-BSM-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCagctgtgtgagaatgctgccgctcgg Oligonucleotide BSM-CRISP1-Fwd Sigma-Aldrich AAGTTGATGATACTCACTGCAGCTCG Oligonucleotide BSM-CRISP1-Rev Sigma-Aldrich AAAACGAGCTGCAGTGAGTATCATCA Oligonucleotide BSM-REV1-screen Sigma-Aldrich GAGCTGCAGTGAGTATCATC Oligonucleotide BSM-CRISP2-Fwd Sigma-Aldrich AAGTTGGAGGAAACTTTCAGCAAAGG Oligonucleotide BSM-CRISP2-Rev Sigma-Aldrich AAAACCTTTGCTGAAAGTTTCCTCCA Oligonucleotide BSM-REV2-screen Sigma-Aldrich CTTTGCTGAAAGTTTCCTCC Chemicals, enzymes, and other reagents Dulbecco’s modified Eagle’s medium Invitrogen Cat# 12491015 Fetal Bovine Serum Gibco 10270106 HEPES Gibco Cat# 15630056 L-glutamine Gibco 25030123 Pénicilline-streptomycine Gibco 15070063 Hank’s Balanced Salt Solution Gibco Cat# 14025-050 3-indoleacetic acid Sigma-Aldrich Cat# 45533 © The Author(s) EMBO Molecular Medicine 15 D ow nloaded from https://w w w .em bopress.org on M ay 22, 2025 from IP 66.96.225.158. .. Reagent/resource Reference or source Identifier or catalog number FR235222 Antunes et al, 2024 DMSO Sigma-Aldrich D2438 Bovine serum albumin Sigma-Aldrich A7030 Hoechst 33342 solution Invitrogen Cat# H1399 Complete EDTA free Roche 05056489001 NBT/BCIP 1-Step Thermo Fisher Scientific Cat# 34042 Coomassie blue R-250 Sigma-Aldrich (MERK) 1.12553.0025 TRIzol Thermo Fisher Scientific Cat# 15596026 Pyrimethamine Sigma-Aldrich (MERK) 46706 ESF921 media Expression System Cat # 96-001-01 Benzonase MERK Millipore Cat # 70746 Ni-NTA resin Qiagen Cat# 30210 SuperBlock blocking buffer Thermo Fisher Scientific Cat# 37515 Recombinant protein A/G peroxidase conjugated Thermo Fisher Scientific Cat# 32490 TMB Substrate Thermo Fisher Scientific Cat# 34029 Software Magnetic Cell Separation:Article Title: Uncovering biomarkers for chronic toxoplasmosis detection highlights alternative pathways shaping parasite dormancy. Article Snippet: D. Soldati Mouse anti-HA Roche RRID: AB_2314622 Rabbit anti-HA Cell Signaling Technology RRID: AB_1549585 Rabbit polyclonal anti-QRS Antunes et al, 2024 Rabbit polyclonal anti-BCLA Dard et al, 2021 Mouse anti-FLAG Cell Signaling Technology Cat♯8146 Rabbit anti-FLAG Cell Signaling Technology RRID: AB_2798687 Rabbit polyclonal anti-BSM Eurogentec custom antibody Alexa Fluor 488 Recombinant Rabbit Monoclonal Antibody Invitrogen A11008 Alexa Fluor 488 Recombinant Mouse Monoclonal Antibody Invitrogen A11001 Alexa Fluor 594 Recombinant Rabbit Monoclonal Antibody Invitrogen A11012 Alexa Fluor 594 Recombinant Mouse Monoclonal Antibody Invitrogen A11005 Anti-Mouse IgG, AP Conjugate Promega S3721 Anti-Rabbit IgG, AP Conjugate Promega S3731 Anti-His-tag chimeric human monoclonal antibody Sigma-Aldrich SAB5600096 Anti-Mouse IgG (Fc specific)–Peroxidase antibody Sigma-Aldrich Cat# A0168 Anti-Human IgG (Fc specific)−Peroxidase antibody Sigma-Aldrich Cat# A0170 Oligonucleotides and other sequence-based reagents Oligonucleotide LIC-216140-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCtccgaagaccatccatgaatattcatgg Oligonucleotide LIC-216140-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCgccgtttatctcgaccacggatggcgg Oligonucleotide LIC-BSM-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCgatgaattaccccacagtgtgtggac Oligonucleotide LIC-BSM-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCagctgtgtgagaatgctgccgctcgg Oligonucleotide BSM-CRISP1-Fwd Sigma-Aldrich AAGTTGATGATACTCACTGCAGCTCG Oligonucleotide BSM-CRISP1-Rev Sigma-Aldrich AAAACGAGCTGCAGTGAGTATCATCA Oligonucleotide BSM-REV1-screen Sigma-Aldrich GAGCTGCAGTGAGTATCATC Oligonucleotide BSM-CRISP2-Fwd Sigma-Aldrich AAGTTGGAGGAAACTTTCAGCAAAGG Oligonucleotide BSM-CRISP2-Rev Sigma-Aldrich AAAACCTTTGCTGAAAGTTTCCTCCA Oligonucleotide BSM-REV2-screen Sigma-Aldrich CTTTGCTGAAAGTTTCCTCC Chemicals, enzymes, and other reagents Dulbecco’s modified Eagle’s medium Invitrogen Cat# 12491015 Fetal Bovine Serum Gibco 10270106 HEPES Gibco Cat# 15630056 L-glutamine Gibco 25030123 Pénicilline-streptomycine Gibco 15070063 Hank’s Balanced Salt Solution Gibco Cat# 14025-050 3-indoleacetic acid Sigma-Aldrich Cat# 45533 © The Author(s) EMBO Molecular Medicine 15 D ow nloaded from https://w w w .em bopress.org on M ay 22, 2025 from IP 66.96.225.158. .. Reagent/resource Reference or source Identifier or catalog number FR235222 Antunes et al, 2024 DMSO Sigma-Aldrich D2438 Bovine serum albumin Sigma-Aldrich A7030 Hoechst 33342 solution Invitrogen Cat# H1399 Complete EDTA free Roche 05056489001 NBT/BCIP 1-Step Thermo Fisher Scientific Cat# 34042 Coomassie blue R-250 Sigma-Aldrich (MERK) 1.12553.0025 TRIzol Thermo Fisher Scientific Cat# 15596026 Pyrimethamine Sigma-Aldrich (MERK) 46706 ESF921 media Expression System Cat # 96-001-01 Benzonase MERK Millipore Cat # 70746 Ni-NTA resin Qiagen Cat# 30210 SuperBlock blocking buffer Thermo Fisher Scientific Cat# 37515 Recombinant protein A/G peroxidase conjugated Thermo Fisher Scientific Cat# 32490 TMB Substrate Thermo Fisher Scientific Cat# 34029 Software Reverse Transcription:Article Title: Uncovering biomarkers for chronic toxoplasmosis detection highlights alternative pathways shaping parasite dormancy. Article Snippet: D. Soldati Mouse anti-HA Roche RRID: AB_2314622 Rabbit anti-HA Cell Signaling Technology RRID: AB_1549585 Rabbit polyclonal anti-QRS Antunes et al, 2024 Rabbit polyclonal anti-BCLA Dard et al, 2021 Mouse anti-FLAG Cell Signaling Technology Cat♯8146 Rabbit anti-FLAG Cell Signaling Technology RRID: AB_2798687 Rabbit polyclonal anti-BSM Eurogentec custom antibody Alexa Fluor 488 Recombinant Rabbit Monoclonal Antibody Invitrogen A11008 Alexa Fluor 488 Recombinant Mouse Monoclonal Antibody Invitrogen A11001 Alexa Fluor 594 Recombinant Rabbit Monoclonal Antibody Invitrogen A11012 Alexa Fluor 594 Recombinant Mouse Monoclonal Antibody Invitrogen A11005 Anti-Mouse IgG, AP Conjugate Promega S3721 Anti-Rabbit IgG, AP Conjugate Promega S3731 Anti-His-tag chimeric human monoclonal antibody Sigma-Aldrich SAB5600096 Anti-Mouse IgG (Fc specific)–Peroxidase antibody Sigma-Aldrich Cat# A0168 Anti-Human IgG (Fc specific)−Peroxidase antibody Sigma-Aldrich Cat# A0170 Oligonucleotides and other sequence-based reagents Oligonucleotide LIC-216140-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCtccgaagaccatccatgaatattcatgg Oligonucleotide LIC-216140-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCgccgtttatctcgaccacggatggcgg Oligonucleotide LIC-BSM-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCgatgaattaccccacagtgtgtggac Oligonucleotide LIC-BSM-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCagctgtgtgagaatgctgccgctcgg Oligonucleotide BSM-CRISP1-Fwd Sigma-Aldrich AAGTTGATGATACTCACTGCAGCTCG Oligonucleotide BSM-CRISP1-Rev Sigma-Aldrich AAAACGAGCTGCAGTGAGTATCATCA Oligonucleotide BSM-REV1-screen Sigma-Aldrich GAGCTGCAGTGAGTATCATC Oligonucleotide BSM-CRISP2-Fwd Sigma-Aldrich AAGTTGGAGGAAACTTTCAGCAAAGG Oligonucleotide BSM-CRISP2-Rev Sigma-Aldrich AAAACCTTTGCTGAAAGTTTCCTCCA Oligonucleotide BSM-REV2-screen Sigma-Aldrich CTTTGCTGAAAGTTTCCTCC Chemicals, enzymes, and other reagents Dulbecco’s modified Eagle’s medium Invitrogen Cat# 12491015 Fetal Bovine Serum Gibco 10270106 HEPES Gibco Cat# 15630056 L-glutamine Gibco 25030123 Pénicilline-streptomycine Gibco 15070063 Hank’s Balanced Salt Solution Gibco Cat# 14025-050 3-indoleacetic acid Sigma-Aldrich Cat# 45533 © The Author(s) EMBO Molecular Medicine 15 D ow nloaded from https://w w w .em bopress.org on M ay 22, 2025 from IP 66.96.225.158. .. Reagent/resource Reference or source Identifier or catalog number FR235222 Antunes et al, 2024 DMSO Sigma-Aldrich D2438 Bovine serum albumin Sigma-Aldrich A7030 Hoechst 33342 solution Invitrogen Cat# H1399 Complete EDTA free Roche 05056489001 NBT/BCIP 1-Step Thermo Fisher Scientific Cat# 34042 Coomassie blue R-250 Sigma-Aldrich (MERK) 1.12553.0025 TRIzol Thermo Fisher Scientific Cat# 15596026 Pyrimethamine Sigma-Aldrich (MERK) 46706 ESF921 media Expression System Cat # 96-001-01 Benzonase MERK Millipore Cat # 70746 Ni-NTA resin Qiagen Cat# 30210 SuperBlock blocking buffer Thermo Fisher Scientific Cat# 37515 Recombinant protein A/G peroxidase conjugated Thermo Fisher Scientific Cat# 32490 TMB Substrate Thermo Fisher Scientific Cat# 34029 Software Real-time Polymerase Chain Reaction:Article Title: Uncovering biomarkers for chronic toxoplasmosis detection highlights alternative pathways shaping parasite dormancy. Article Snippet: D. Soldati Mouse anti-HA Roche RRID: AB_2314622 Rabbit anti-HA Cell Signaling Technology RRID: AB_1549585 Rabbit polyclonal anti-QRS Antunes et al, 2024 Rabbit polyclonal anti-BCLA Dard et al, 2021 Mouse anti-FLAG Cell Signaling Technology Cat♯8146 Rabbit anti-FLAG Cell Signaling Technology RRID: AB_2798687 Rabbit polyclonal anti-BSM Eurogentec custom antibody Alexa Fluor 488 Recombinant Rabbit Monoclonal Antibody Invitrogen A11008 Alexa Fluor 488 Recombinant Mouse Monoclonal Antibody Invitrogen A11001 Alexa Fluor 594 Recombinant Rabbit Monoclonal Antibody Invitrogen A11012 Alexa Fluor 594 Recombinant Mouse Monoclonal Antibody Invitrogen A11005 Anti-Mouse IgG, AP Conjugate Promega S3721 Anti-Rabbit IgG, AP Conjugate Promega S3731 Anti-His-tag chimeric human monoclonal antibody Sigma-Aldrich SAB5600096 Anti-Mouse IgG (Fc specific)–Peroxidase antibody Sigma-Aldrich Cat# A0168 Anti-Human IgG (Fc specific)−Peroxidase antibody Sigma-Aldrich Cat# A0170 Oligonucleotides and other sequence-based reagents Oligonucleotide LIC-216140-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCtccgaagaccatccatgaatattcatgg Oligonucleotide LIC-216140-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCgccgtttatctcgaccacggatggcgg Oligonucleotide LIC-BSM-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCgatgaattaccccacagtgtgtggac Oligonucleotide LIC-BSM-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCagctgtgtgagaatgctgccgctcgg Oligonucleotide BSM-CRISP1-Fwd Sigma-Aldrich AAGTTGATGATACTCACTGCAGCTCG Oligonucleotide BSM-CRISP1-Rev Sigma-Aldrich AAAACGAGCTGCAGTGAGTATCATCA Oligonucleotide BSM-REV1-screen Sigma-Aldrich GAGCTGCAGTGAGTATCATC Oligonucleotide BSM-CRISP2-Fwd Sigma-Aldrich AAGTTGGAGGAAACTTTCAGCAAAGG Oligonucleotide BSM-CRISP2-Rev Sigma-Aldrich AAAACCTTTGCTGAAAGTTTCCTCCA Oligonucleotide BSM-REV2-screen Sigma-Aldrich CTTTGCTGAAAGTTTCCTCC Chemicals, enzymes, and other reagents Dulbecco’s modified Eagle’s medium Invitrogen Cat# 12491015 Fetal Bovine Serum Gibco 10270106 HEPES Gibco Cat# 15630056 L-glutamine Gibco 25030123 Pénicilline-streptomycine Gibco 15070063 Hank’s Balanced Salt Solution Gibco Cat# 14025-050 3-indoleacetic acid Sigma-Aldrich Cat# 45533 © The Author(s) EMBO Molecular Medicine 15 D ow nloaded from https://w w w .em bopress.org on M ay 22, 2025 from IP 66.96.225.158. .. Reagent/resource Reference or source Identifier or catalog number FR235222 Antunes et al, 2024 DMSO Sigma-Aldrich D2438 Bovine serum albumin Sigma-Aldrich A7030 Hoechst 33342 solution Invitrogen Cat# H1399 Complete EDTA free Roche 05056489001 NBT/BCIP 1-Step Thermo Fisher Scientific Cat# 34042 Coomassie blue R-250 Sigma-Aldrich (MERK) 1.12553.0025 TRIzol Thermo Fisher Scientific Cat# 15596026 Pyrimethamine Sigma-Aldrich (MERK) 46706 ESF921 media Expression System Cat # 96-001-01 Benzonase MERK Millipore Cat # 70746 Ni-NTA resin Qiagen Cat# 30210 SuperBlock blocking buffer Thermo Fisher Scientific Cat# 37515 Recombinant protein A/G peroxidase conjugated Thermo Fisher Scientific Cat# 32490 TMB Substrate Thermo Fisher Scientific Cat# 34029 Software Chromatography:Article Title: Uncovering biomarkers for chronic toxoplasmosis detection highlights alternative pathways shaping parasite dormancy. Article Snippet: D. Soldati Mouse anti-HA Roche RRID: AB_2314622 Rabbit anti-HA Cell Signaling Technology RRID: AB_1549585 Rabbit polyclonal anti-QRS Antunes et al, 2024 Rabbit polyclonal anti-BCLA Dard et al, 2021 Mouse anti-FLAG Cell Signaling Technology Cat♯8146 Rabbit anti-FLAG Cell Signaling Technology RRID: AB_2798687 Rabbit polyclonal anti-BSM Eurogentec custom antibody Alexa Fluor 488 Recombinant Rabbit Monoclonal Antibody Invitrogen A11008 Alexa Fluor 488 Recombinant Mouse Monoclonal Antibody Invitrogen A11001 Alexa Fluor 594 Recombinant Rabbit Monoclonal Antibody Invitrogen A11012 Alexa Fluor 594 Recombinant Mouse Monoclonal Antibody Invitrogen A11005 Anti-Mouse IgG, AP Conjugate Promega S3721 Anti-Rabbit IgG, AP Conjugate Promega S3731 Anti-His-tag chimeric human monoclonal antibody Sigma-Aldrich SAB5600096 Anti-Mouse IgG (Fc specific)–Peroxidase antibody Sigma-Aldrich Cat# A0168 Anti-Human IgG (Fc specific)−Peroxidase antibody Sigma-Aldrich Cat# A0170 Oligonucleotides and other sequence-based reagents Oligonucleotide LIC-216140-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCtccgaagaccatccatgaatattcatgg Oligonucleotide LIC-216140-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCgccgtttatctcgaccacggatggcgg Oligonucleotide LIC-BSM-Fwd Sigma-Aldrich TACTTCCAATCCAATTTAGCgatgaattaccccacagtgtgtggac Oligonucleotide LIC-BSM-Rev Sigma-Aldrich TCCTCCACTTCCAATTTTAGCagctgtgtgagaatgctgccgctcgg Oligonucleotide BSM-CRISP1-Fwd Sigma-Aldrich AAGTTGATGATACTCACTGCAGCTCG Oligonucleotide BSM-CRISP1-Rev Sigma-Aldrich AAAACGAGCTGCAGTGAGTATCATCA Oligonucleotide BSM-REV1-screen Sigma-Aldrich GAGCTGCAGTGAGTATCATC Oligonucleotide BSM-CRISP2-Fwd Sigma-Aldrich AAGTTGGAGGAAACTTTCAGCAAAGG Oligonucleotide BSM-CRISP2-Rev Sigma-Aldrich AAAACCTTTGCTGAAAGTTTCCTCCA Oligonucleotide BSM-REV2-screen Sigma-Aldrich CTTTGCTGAAAGTTTCCTCC Chemicals, enzymes, and other reagents Dulbecco’s modified Eagle’s medium Invitrogen Cat# 12491015 Fetal Bovine Serum Gibco 10270106 HEPES Gibco Cat# 15630056 L-glutamine Gibco 25030123 Pénicilline-streptomycine Gibco 15070063 Hank’s Balanced Salt Solution Gibco Cat# 14025-050 3-indoleacetic acid Sigma-Aldrich Cat# 45533 © The Author(s) EMBO Molecular Medicine 15 D ow nloaded from https://w w w .em bopress.org on M ay 22, 2025 from IP 66.96.225.158. .. Reagent/resource Reference or source Identifier or catalog number FR235222 Antunes et al, 2024 DMSO Sigma-Aldrich D2438 Bovine serum albumin Sigma-Aldrich A7030 Hoechst 33342 solution Invitrogen Cat# H1399 Complete EDTA free Roche 05056489001 NBT/BCIP 1-Step Thermo Fisher Scientific Cat# 34042 Coomassie blue R-250 Sigma-Aldrich (MERK) 1.12553.0025 TRIzol Thermo Fisher Scientific Cat# 15596026 Pyrimethamine Sigma-Aldrich (MERK) 46706 ESF921 media Expression System Cat # 96-001-01 Benzonase MERK Millipore Cat # 70746 Ni-NTA resin Qiagen Cat# 30210 SuperBlock blocking buffer Thermo Fisher Scientific Cat# 37515 Recombinant protein A/G peroxidase conjugated Thermo Fisher Scientific Cat# 32490 TMB Substrate Thermo Fisher Scientific Cat# 34029 Software |