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SourceForge net bbmap software package
Bbmap Software Package, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/software+package+bbmap/bbmap+software/pm38797999-160-22-25
Average 90 stars, based on 1 article reviews
bbmap software package - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

Sequencing:

Article Title: Association of Microbial Networks with the Coastal Seafloor Macrofauna Ecological State
Article Snippet: .. The reads from the whole genome sequencing were trimmed, filtered, and merged (if possible) using the Bbmap software version 39.01 (sourceforge.net/projects/bbmap/). ..

Article Title: Association of Microbial Networks with the Coastal Seafloor Macrofauna Ecological State.
Article Snippet: .. Functional assignments for the 16S rRNA gene data were done using the FAPROTAV 1.2.7 database.36 The reads from the whole genome sequencing were trimmed, filtered, and merged (if possible) using the Bbmap software version 39.01 (sourceforge.net/projects/bbmap/). ..

Software:

Article Title: Association of Microbial Networks with the Coastal Seafloor Macrofauna Ecological State
Article Snippet: .. The reads from the whole genome sequencing were trimmed, filtered, and merged (if possible) using the Bbmap software version 39.01 (sourceforge.net/projects/bbmap/). ..

Article Title: Diet-Induced Obesity Alters Granulosa Cell Transcriptome and Ovarian Immune Environment in Mice
Article Snippet: High-throughput 75 single-end cycle sequencing was performed using NextSeq 550 (Illumina Inc., San Diego, CA, USA). .. The quality of the reads was examined using fast QC (http:// www.bioinformatics.babraham.ac.uk/projects/fastqc/, accessed 19 December 2016), and lowquality (Phred quality score < 20) reads were trimmed using BBDuk, a part of bbmap software (http://sourceforge.net/projects/bbmap/, accessed 2 September 2019). .. After removing lowquality reads, the sequencing reads were aligned by Bowtie2 [27] using the reference genome of the Illumina iGenomes UCSC mm10.

Article Title: In vivo virulence of Staphylococcus aureus in native versus prosthetic left-sided valve endocarditis
Article Snippet: .. Host-derived reads were excluded by mapping the reads to the reference human genome (GCF_000001405.40) using BBMap software ( sourceforge.net/projects/bbmap/ ). ..

Article Title: Association of Microbial Networks with the Coastal Seafloor Macrofauna Ecological State.
Article Snippet: .. Functional assignments for the 16S rRNA gene data were done using the FAPROTAV 1.2.7 database.36 The reads from the whole genome sequencing were trimmed, filtered, and merged (if possible) using the Bbmap software version 39.01 (sourceforge.net/projects/bbmap/). ..

other:

Article Title: Reduced maternal SCFAs in GDM diminish GPR43 signaling and induce offspring CAKUT
Article Snippet: BBMap ( https://sourceforge.net/projects/bbmap/ ) software was employed to repair the paired-end sequences.

Article Title: Depth-structured lineages in the coral Stylophora pistillata of the Northern Red Sea
Article Snippet: Read trimming, quality filtering and mapping was conducted using BBMap tools ( http://sourceforge.net/projects/bbmap/ ), with all reads mapped to the Stylophora reference genome with an alignment identity threshold of 0.9.

Article Title: Depth-structured lineages in the coral Stylophora pistillata of the Northern Red Sea.
Article Snippet: Read trimming, quality filtering and mapping was conducted using BBMap tools (http://sourceforge.net/projects/bbmap/), with all reads mapped to the Stylophora reference genome92 with an alignment identity threshold of 0.9.

Article Title: Multi-omic investigation identifies key antifungal biochemistry during fermentation of a Streptomyces biological control agent.
Article Snippet: Coverage was estimated using minimap2 (v2.24, Li, 2018) and the BBMap’s pileup.sh tool (https://sourceforge.net/projec ts/bbmap/).

Functional Assay:

Article Title: Association of Microbial Networks with the Coastal Seafloor Macrofauna Ecological State.
Article Snippet: .. Functional assignments for the 16S rRNA gene data were done using the FAPROTAV 1.2.7 database.36 The reads from the whole genome sequencing were trimmed, filtered, and merged (if possible) using the Bbmap software version 39.01 (sourceforge.net/projects/bbmap/). ..



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90
SourceForge net bbmap software package
Bbmap Software Package, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/software+package+bbmap/bbmap+software/pm38797999-160-22-25
Average 90 stars, based on 1 article reviews
bbmap software package - by Bioz Stars, 2026-09
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90
SourceForge net software package bbmap
Software Package Bbmap, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/software+package+bbmap/bbmap+software/pmc10119871-151-16-19
Average 90 stars, based on 1 article reviews
software package bbmap - by Bioz Stars, 2026-09
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  Buy from Supplier

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