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proteome discoverer with the sequest ht algorithm  (Thermo Fisher)


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    Thermo Fisher proteome discoverer with the sequest ht algorithm
    Proteome Discoverer With The Sequest Ht Algorithm, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequest+ht+algorithm/proteome+discoverer+with+the+sequest+ht+algorithm/pm39992933-332-7-14
    Average 90 stars, based on 1 article reviews
    proteome discoverer with the sequest ht algorithm - by Bioz Stars, 2026-09
    90/100 stars

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    Modification:

    Article Title: A ribosome-interacting jumbophage protein associates with the phage nucleus to facilitate efficient propagation.
    Article Snippet: Xcalibur software (Thermo Fisher) was utilized to automatically collect the mass spectra. .. Raw LC–MS/MS files underwent analysis using the Proteome Discoverer with the SEQUEST HT algorithm (Thermo Fisher), referencing the in-house protein database, adhering to specific criteria: strict trypsin specificity, up to two missed cleavages, a fixed carbamidomethyl modification on cysteine (+57.0215 Da) and a variable modification on methionine (+15.9949). ..



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    Image Search Results


    Journal: iScience

    Article Title: Bromodomain protein BRD8 regulates cell cycle progression in colorectal cancer cells through a TIP60-independent regulation of the pre-RC complex

    doi: 10.1016/j.isci.2023.106563

    Figure Lengend Snippet:

    Article Snippet: Peptide identification was performed using SEQUEST HT algorithm in Proteome Discoverer Software (v2.5) (Thermo Fisher Scientific) based on the statistical criterion of a false discovery rate <1%.

    Techniques: Recombinant, Plasmid Preparation, Cell Cycle Assay, CCK-8 Assay, Flow Cytometry, Viability Assay, Ubiquitin Proteomics, Expressing, Cloning, Mutagenesis, Software