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sequence analysis software program  (Thermo Fisher)


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    Structured Review

    Thermo Fisher sequence analysis software program
    Sequence Analysis Software Program, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequencing+analysis+software+program/pmc09170233-110-2-6
    Average 90 stars, based on 1 article reviews
    sequence analysis software program - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Construct:

    Article Title: Application of Pulsed Electric Field During Malting: Impact on Fusarium Species Growth and Mycotoxin Production
    Article Snippet: .. Standard curves were constructed by correlating the known DNA concentrations with the Ct values obtained using the Sequence Detection System software (ThermoFisher Scientific, USA). ..

    Sequencing:

    Article Title: Application of Pulsed Electric Field During Malting: Impact on Fusarium Species Growth and Mycotoxin Production
    Article Snippet: .. Standard curves were constructed by correlating the known DNA concentrations with the Ct values obtained using the Sequence Detection System software (ThermoFisher Scientific, USA). ..

    Article Title: PM exposure during pregnancy affects childhood asthma via placental epigenetic changes: Neuronal differentiation and proliferation and Notch signaling pathways.
    Article Snippet: Quantitative PCR (qPCR) was performed using TaqMan Gene Expression Assays from Life Technologies (NOTCH1, Hs01062014_m1; NOTCH3, Hs01128537_m1; PAX6, Hs01088114_m1; REST, Hs05028212_s1; OLIG2, Hs00300164_s1; ZBTB7A, Hs00252415_s1; GLI1, Hs00171790_m1; NOTCH4, Hs00965889_m1) on an ABI PRISM 7900HT Sequence Detection System (Applied Biosystems, Foster City, CA, USA). .. All samples were amplified in triplicate, and we analyzed the data using Sequence Detector software (Applied Biosystems). ..

    Article Title: Analysis of Single Nucleotide Polymorphisms of Liver X Receptor Alpha (LXR-α) Gene in Diabetic Kidney Disease
    Article Snippet: After validation, forward and reverse primers were used for each sample to run all PCR products through automated DNA sequencing (ABI_3500xl). .. Sequence Analysis Software (ABI, Applied Biosystems) was used to assess the sequence quality of the electropherograms produced by automated DNA sequencing. .. Variant Reporter Software (ABI) was used to achieve sequence alignment.

    Article Title: Coxsackievirus and adenovirus receptor expression facilitates enteroviral infections to drive the development of pancreatic cancer.
    Article Snippet: The thermocycler program was as follows: 95 °C for 20 s, 40 cycles of 95 °C for 1 s, and 60 °C for 20 s. Probe/primer sets were purchased from Applied Biosystems (Mm99999915_g1 for GAPDH, Mm00438355_m1 for Cxadr/ CAR). .. Amplification data were collected by a Prism 7900 sequence detector and analyzed with Sequence Detection System software (Applied Biosystems). ..

    Article Title: TDP-43 regulates LC3ylation in neural tissue through ATG4B cryptic splicing inhibition
    Article Snippet: .. Finally, the capture of all TaqMan PCR data was with the Sequence Detection Software (Thermo Fisher Scientific, SDS version 2.2.2). ..

    Article Title: The MyoGravity project to study real microgravity effects on human muscle precursor cells and tissue
    Article Snippet: .. Applied Biosystems Prism 7900HT Sequence Detection System was used with the Sequence Detector Software (SDS version 2.0; Applied Biosystems). ..

    Article Title: The potency of Thymus vulgaris seed extract in alleviating obesity complications and iron overload in obese rats
    Article Snippet: Natural products have long been recognized as valuable sources of bioactive compounds in therapeutic agents.. Thymus vulgaris, commonly known as thyme and belonging to the Lamiaceae family, is widely distributed and extensively used in Egyptian folk medicine for its antibroncholitic, antispasmodic, carminative, and diuretic properties.. However, there is a lack of research on the effects of T. vulgaris seed extract in mitigating obesityinduced iron overload in rats.

    Article Title: Encapsulated Chlorhexidine Gel Use in Adolescents Undergoing Orthodontic Treatment: A Randomised Trial.
    Article Snippet: .. Sequence Detection Software (version 2.0; Applied Biosystems) was used to analyse the data after amplification. ..

    Software:

    Article Title: Application of Pulsed Electric Field During Malting: Impact on Fusarium Species Growth and Mycotoxin Production
    Article Snippet: .. Standard curves were constructed by correlating the known DNA concentrations with the Ct values obtained using the Sequence Detection System software (ThermoFisher Scientific, USA). ..

    Article Title: PM exposure during pregnancy affects childhood asthma via placental epigenetic changes: Neuronal differentiation and proliferation and Notch signaling pathways.
    Article Snippet: Quantitative PCR (qPCR) was performed using TaqMan Gene Expression Assays from Life Technologies (NOTCH1, Hs01062014_m1; NOTCH3, Hs01128537_m1; PAX6, Hs01088114_m1; REST, Hs05028212_s1; OLIG2, Hs00300164_s1; ZBTB7A, Hs00252415_s1; GLI1, Hs00171790_m1; NOTCH4, Hs00965889_m1) on an ABI PRISM 7900HT Sequence Detection System (Applied Biosystems, Foster City, CA, USA). .. All samples were amplified in triplicate, and we analyzed the data using Sequence Detector software (Applied Biosystems). ..

    Article Title: Analysis of Single Nucleotide Polymorphisms of Liver X Receptor Alpha (LXR-α) Gene in Diabetic Kidney Disease
    Article Snippet: After validation, forward and reverse primers were used for each sample to run all PCR products through automated DNA sequencing (ABI_3500xl). .. Sequence Analysis Software (ABI, Applied Biosystems) was used to assess the sequence quality of the electropherograms produced by automated DNA sequencing. .. Variant Reporter Software (ABI) was used to achieve sequence alignment.

    Article Title: Coxsackievirus and adenovirus receptor expression facilitates enteroviral infections to drive the development of pancreatic cancer.
    Article Snippet: The thermocycler program was as follows: 95 °C for 20 s, 40 cycles of 95 °C for 1 s, and 60 °C for 20 s. Probe/primer sets were purchased from Applied Biosystems (Mm99999915_g1 for GAPDH, Mm00438355_m1 for Cxadr/ CAR). .. Amplification data were collected by a Prism 7900 sequence detector and analyzed with Sequence Detection System software (Applied Biosystems). ..

    Article Title: TDP-43 regulates LC3ylation in neural tissue through ATG4B cryptic splicing inhibition
    Article Snippet: .. Finally, the capture of all TaqMan PCR data was with the Sequence Detection Software (Thermo Fisher Scientific, SDS version 2.2.2). ..

    Article Title: The MyoGravity project to study real microgravity effects on human muscle precursor cells and tissue
    Article Snippet: .. Applied Biosystems Prism 7900HT Sequence Detection System was used with the Sequence Detector Software (SDS version 2.0; Applied Biosystems). ..

    Article Title: The potency of Thymus vulgaris seed extract in alleviating obesity complications and iron overload in obese rats
    Article Snippet: Natural products have long been recognized as valuable sources of bioactive compounds in therapeutic agents.. Thymus vulgaris, commonly known as thyme and belonging to the Lamiaceae family, is widely distributed and extensively used in Egyptian folk medicine for its antibroncholitic, antispasmodic, carminative, and diuretic properties.. However, there is a lack of research on the effects of T. vulgaris seed extract in mitigating obesityinduced iron overload in rats.

    Article Title: Encapsulated Chlorhexidine Gel Use in Adolescents Undergoing Orthodontic Treatment: A Randomised Trial.
    Article Snippet: .. Sequence Detection Software (version 2.0; Applied Biosystems) was used to analyse the data after amplification. ..

    Amplification:

    Article Title: PM exposure during pregnancy affects childhood asthma via placental epigenetic changes: Neuronal differentiation and proliferation and Notch signaling pathways.
    Article Snippet: Quantitative PCR (qPCR) was performed using TaqMan Gene Expression Assays from Life Technologies (NOTCH1, Hs01062014_m1; NOTCH3, Hs01128537_m1; PAX6, Hs01088114_m1; REST, Hs05028212_s1; OLIG2, Hs00300164_s1; ZBTB7A, Hs00252415_s1; GLI1, Hs00171790_m1; NOTCH4, Hs00965889_m1) on an ABI PRISM 7900HT Sequence Detection System (Applied Biosystems, Foster City, CA, USA). .. All samples were amplified in triplicate, and we analyzed the data using Sequence Detector software (Applied Biosystems). ..

    Article Title: Coxsackievirus and adenovirus receptor expression facilitates enteroviral infections to drive the development of pancreatic cancer.
    Article Snippet: The thermocycler program was as follows: 95 °C for 20 s, 40 cycles of 95 °C for 1 s, and 60 °C for 20 s. Probe/primer sets were purchased from Applied Biosystems (Mm99999915_g1 for GAPDH, Mm00438355_m1 for Cxadr/ CAR). .. Amplification data were collected by a Prism 7900 sequence detector and analyzed with Sequence Detection System software (Applied Biosystems). ..

    Article Title: Encapsulated Chlorhexidine Gel Use in Adolescents Undergoing Orthodontic Treatment: A Randomised Trial.
    Article Snippet: .. Sequence Detection Software (version 2.0; Applied Biosystems) was used to analyse the data after amplification. ..

    Produced:

    Article Title: Analysis of Single Nucleotide Polymorphisms of Liver X Receptor Alpha (LXR-α) Gene in Diabetic Kidney Disease
    Article Snippet: After validation, forward and reverse primers were used for each sample to run all PCR products through automated DNA sequencing (ABI_3500xl). .. Sequence Analysis Software (ABI, Applied Biosystems) was used to assess the sequence quality of the electropherograms produced by automated DNA sequencing. .. Variant Reporter Software (ABI) was used to achieve sequence alignment.

    DNA Sequencing:

    Article Title: Analysis of Single Nucleotide Polymorphisms of Liver X Receptor Alpha (LXR-α) Gene in Diabetic Kidney Disease
    Article Snippet: After validation, forward and reverse primers were used for each sample to run all PCR products through automated DNA sequencing (ABI_3500xl). .. Sequence Analysis Software (ABI, Applied Biosystems) was used to assess the sequence quality of the electropherograms produced by automated DNA sequencing. .. Variant Reporter Software (ABI) was used to achieve sequence alignment.

    Polymerase Chain Reaction:

    Article Title: TDP-43 regulates LC3ylation in neural tissue through ATG4B cryptic splicing inhibition
    Article Snippet: .. Finally, the capture of all TaqMan PCR data was with the Sequence Detection Software (Thermo Fisher Scientific, SDS version 2.2.2). ..

    Fluorescence:

    Article Title: The potency of Thymus vulgaris seed extract in alleviating obesity complications and iron overload in obese rats
    Article Snippet: Natural products have long been recognized as valuable sources of bioactive compounds in therapeutic agents.. Thymus vulgaris, commonly known as thyme and belonging to the Lamiaceae family, is widely distributed and extensively used in Egyptian folk medicine for its antibroncholitic, antispasmodic, carminative, and diuretic properties.. However, there is a lack of research on the effects of T. vulgaris seed extract in mitigating obesityinduced iron overload in rats.

    Gene Expression:

    Article Title: The potency of Thymus vulgaris seed extract in alleviating obesity complications and iron overload in obese rats
    Article Snippet: Natural products have long been recognized as valuable sources of bioactive compounds in therapeutic agents.. Thymus vulgaris, commonly known as thyme and belonging to the Lamiaceae family, is widely distributed and extensively used in Egyptian folk medicine for its antibroncholitic, antispasmodic, carminative, and diuretic properties.. However, there is a lack of research on the effects of T. vulgaris seed extract in mitigating obesityinduced iron overload in rats.



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