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sequencing analysis viewer program  (Illumina Inc)


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    Structured Review

    Illumina Inc sequencing analysis viewer program
    Sequencing Analysis Viewer Program, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequence+analysis+viewer+program/sequencing+analysis+viewer/pm30731207-66-1-5
    Average 90 stars, based on 1 article reviews
    sequencing analysis viewer program - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    other:

    Article Title: Contribution of molecular characterization to the diagnosis of MPN in patients with low JAK2 V617F variant allelic fraction in a real-world cohort.
    Article Snippet: Twelve patients (38.7%) carried more than two other mutations, among them, two patients (6.4%) had additional driver mutation detected by NGS: one patient with a CALR low VAF (3.7%) and another with a second point mutation aligned to the human genome assembly GRCh37/hg19 and sequencing quality metrics were checked for each run using the Illumina sequence analysis viewer (SAV): cluster density (K/mm2), clusters passing filter (%), %Q30 > 80, Phred score > 30 for the first 150 sequencing cycles.

    Article Title: Lifelong exposure to polystyrene-nanoplastics induces an attention-deficit hyperactivity disorder-like phenotype and impairs brain aging in mice.
    Article Snippet: • Maternal exposure to PS-NPs alters neurodevelopmental key milestones in

    Article Title: Contribution of molecular characterization to the diagnosis of MPN in patients with low JAK2 V617F variant allelic fraction in a real-world cohort
    Article Snippet: Sequence reads were aligned to the human genome assembly GRCh37/hg19 and sequencing quality metrics were checked for each run using the Illumina sequence analysis viewer (SAV): cluster density (K/mm 2 ), clusters passing filter (%), %Q30 > 80, Phred score > 30 for the first 150 sequencing cycles.

    Next-Generation Sequencing:

    Article Title: Technical and Clinical Validity of Assessing Measurable Residual Disease by Multicolor Flow Cytometry in an Unselected Acute Myeloid Leukemia Patient Cohort
    Article Snippet: .. NGS data were analyzed using NextSeq Control Software 4.2 (Illumina, San Diego, California), Real Time Analysis (Real Time Analysis Software Limited, Berkshire, England), Sequence Analysis Viewer (Illumina), and IBM PAC (IBM, Armonk, New York). ..

    Control:

    Article Title: Technical and Clinical Validity of Assessing Measurable Residual Disease by Multicolor Flow Cytometry in an Unselected Acute Myeloid Leukemia Patient Cohort
    Article Snippet: .. NGS data were analyzed using NextSeq Control Software 4.2 (Illumina, San Diego, California), Real Time Analysis (Real Time Analysis Software Limited, Berkshire, England), Sequence Analysis Viewer (Illumina), and IBM PAC (IBM, Armonk, New York). ..

    Article Title: Tracing the evolutionary pathway of SARS-CoV-2 through RNA sequencing analysis.
    Article Snippet: Libraries were sequenced on an Illumina HiSeq 2500 V4 system. .. Sequencing quality control was performed using Sequence Analysis Viewer, and FastQ files were generated on the Illumina BaseSpace Sequence Hub20. ..

    Software:

    Article Title: Technical and Clinical Validity of Assessing Measurable Residual Disease by Multicolor Flow Cytometry in an Unselected Acute Myeloid Leukemia Patient Cohort
    Article Snippet: .. NGS data were analyzed using NextSeq Control Software 4.2 (Illumina, San Diego, California), Real Time Analysis (Real Time Analysis Software Limited, Berkshire, England), Sequence Analysis Viewer (Illumina), and IBM PAC (IBM, Armonk, New York). ..

    Sequencing:

    Article Title: Technical and Clinical Validity of Assessing Measurable Residual Disease by Multicolor Flow Cytometry in an Unselected Acute Myeloid Leukemia Patient Cohort
    Article Snippet: .. NGS data were analyzed using NextSeq Control Software 4.2 (Illumina, San Diego, California), Real Time Analysis (Real Time Analysis Software Limited, Berkshire, England), Sequence Analysis Viewer (Illumina), and IBM PAC (IBM, Armonk, New York). ..

    Article Title: Tracing the evolutionary pathway of SARS-CoV-2 through RNA sequencing analysis.
    Article Snippet: Libraries were sequenced on an Illumina HiSeq 2500 V4 system. .. Sequencing quality control was performed using Sequence Analysis Viewer, and FastQ files were generated on the Illumina BaseSpace Sequence Hub20. ..

    Article Title: Genetic variability in HPV 33 and 35 E6 and E7 genes from South African and Mozambican women with different cervical cytology status.
    Article Snippet: The final pool had an average fragment size of 475 bp and a final concentration of 4 nanomolar (nM) that was further denatured and diluted to a final loading concentration of 8 pM on the Illumina MiSeq. .. The sequencing run metrics were obtained from Illumina Sequencing Analysis Viewer (SAV) after sequencing. .. The sequencing run was completed successfully without errors, and the percentage of bases with a quality score of 30 or higher (Q30) was above 70%, which is the recommendation made by Illumina.

    Article Title: Genetic Variation in Hydrochlorothiazide Response‐Related Genes Among Hypertensive Individuals in Soweto, South Africa
    Article Snippet: .. The Illumina sequencing analysis viewer was used to assess sequencing quality. ..

    Generated:

    Article Title: Tracing the evolutionary pathway of SARS-CoV-2 through RNA sequencing analysis.
    Article Snippet: Libraries were sequenced on an Illumina HiSeq 2500 V4 system. .. Sequencing quality control was performed using Sequence Analysis Viewer, and FastQ files were generated on the Illumina BaseSpace Sequence Hub20. ..



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