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bead array reader and bead scan software  (Illumina Inc)


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    Structured Review

    Illumina Inc bead array reader and bead scan software
    Bead Array Reader And Bead Scan Software, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/scan+array+software/platform+scanning+software/pm34276814-33-7-7
    Average 90 stars, based on 1 article reviews
    bead array reader and bead scan software - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Software:

    Article Title: Expression Profiles of ID and E2A in Ovarian Cancer and Suppression of Ovarian Cancer by the E2A Isoform E47
    Article Snippet: .. The resulting data were collected by scanner software and pre-processed using GenomeStudio software (Illumina, Inc.). .. Subsequently, principal component analysis of differential gene expression was performed using the Partek Genomics Suite software (Partek, Inc., St. Louis, MO, USA).

    Article Title: Gene networks in skeletal muscle following endurance exercise are coexpressed in blood neutrophils and linked with blood inflammation markers.
    Article Snippet: .. Probes with signal below the threshold of 146 reliable detection according to the default Illumina scanner software were removed from 147 further analysis. .. Data were then filtered in R to remove probes that did not possess a gene 148 symbol as per the Illumina array annotation to leave 27,626 probes.

    Article Title: Multi-Scale Genomic, Transcriptomic and Proteomic Analysis of Colorectal Cancer Cell Lines to Identify Novel Biomarkers.
    Article Snippet: Post-hybridization, the arrays were scanned using the Illumina HiScan1 Platform (Illumina1, cat. no. SY-103-1001). .. The BeadArray data files were exported from the Illumina’s scanning software and imported into the gene expression module of the GenomeStudio software (Illumina1), where subsequently the data files were transformed to tab delimited files. .. The data have been deposited at the National Centre for Biotechnology Information (NCBI) Gene Expression Omnibus with accession number GSE72544 (http://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE72544).

    Article Title: The Educational Program of Macrophages toward a Hyperprogressive Disease-Related Phenotype Is Orchestrated by Tumor-Derived Extracellular Vesicles.
    Article Snippet: Total RNA was extracted with QIAzol Lysis Reagent (Qiagen Redwood City, CA, USA) and RNeasy kit (Qiagen) according to the manufacturer’s instructions, processed and hybridized to Illumina MouseWG-6 v2.0 expression beadchip (Illumina, Inc., San Diego, CA, USA) according to the manufacturer’s instructions. .. Primary data were collected using the supplied scanner software and analyzed using BeadStudio Version 3 software (Illumina, Inc., San Diego, CA, USA). ..

    Article Title: The apoptotic and genomic studies on A549 cell line induced by silver nitrate.
    Article Snippet: .. Finally, the samples were scanned using Illumina Scan Control Software program of Illumina iScan (San Diego, California, USA). ..

    Article Title: Fe 3 O 4 Nanopowders: Genomic and Apoptotic Evaluations on A549 Lung Adenocarcinoma Cell Line.
    Article Snippet: The magnetite nanoparticles are progressively used in a wide range of biological applications.. In the present study, we purposed to show apoptosis-inducing ability of Fe3O4 nanopowders on A549 cells.. In addition, the toxic effects of Fe3O4 nanopowders were researched on L929 cells.

    Article Title: A novel crosstalk between CCAR2 and AKT pathway in the regulation of cancer cell proliferation.
    Article Snippet: Array chips were washed with manufacturer’s E1BC solution, stained with 1 μg/ml Cy3-streptavidine (Amersham Biosciences) and eventually scanned with Illumina BeadArray Reader. .. We collected primary data using the supplied scanner software and GenomeStudio v2009.1 software package (Illumina, San Diego, CA, USA). ..

    other:

    Article Title: NDUFA4L2 promotes trastuzumab resistance in HER2-positive breast cancer.
    Article Snippet: The BeadChips were then scanned using an Illumina Bead Array Reader and Bead Scan Software (Illumina, San Diego, CA, USA).

    Gene Expression:

    Article Title: Multi-Scale Genomic, Transcriptomic and Proteomic Analysis of Colorectal Cancer Cell Lines to Identify Novel Biomarkers.
    Article Snippet: Post-hybridization, the arrays were scanned using the Illumina HiScan1 Platform (Illumina1, cat. no. SY-103-1001). .. The BeadArray data files were exported from the Illumina’s scanning software and imported into the gene expression module of the GenomeStudio software (Illumina1), where subsequently the data files were transformed to tab delimited files. .. The data have been deposited at the National Centre for Biotechnology Information (NCBI) Gene Expression Omnibus with accession number GSE72544 (http://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE72544).

    Transformation Assay:

    Article Title: Multi-Scale Genomic, Transcriptomic and Proteomic Analysis of Colorectal Cancer Cell Lines to Identify Novel Biomarkers.
    Article Snippet: Post-hybridization, the arrays were scanned using the Illumina HiScan1 Platform (Illumina1, cat. no. SY-103-1001). .. The BeadArray data files were exported from the Illumina’s scanning software and imported into the gene expression module of the GenomeStudio software (Illumina1), where subsequently the data files were transformed to tab delimited files. .. The data have been deposited at the National Centre for Biotechnology Information (NCBI) Gene Expression Omnibus with accession number GSE72544 (http://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE72544).

    Control:

    Article Title: The apoptotic and genomic studies on A549 cell line induced by silver nitrate.
    Article Snippet: .. Finally, the samples were scanned using Illumina Scan Control Software program of Illumina iScan (San Diego, California, USA). ..

    Article Title: Fe 3 O 4 Nanopowders: Genomic and Apoptotic Evaluations on A549 Lung Adenocarcinoma Cell Line.
    Article Snippet: The magnetite nanoparticles are progressively used in a wide range of biological applications.. In the present study, we purposed to show apoptosis-inducing ability of Fe3O4 nanopowders on A549 cells.. In addition, the toxic effects of Fe3O4 nanopowders were researched on L929 cells.



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