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plot profile function  (GraphPad Software Inc)


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    Structured Review

    GraphPad Software Inc plot profile function
    Plot Profile Function, supplied by GraphPad Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/profile+plot/plot+profile+function/pm39862867-337-4-10
    Average 90 stars, based on 1 article reviews
    plot profile function - by Bioz Stars, 2026-10
    90/100 stars

    Images

    Related Articles

    other:

    Article Title: Spatial profiles of markers of glycolysis, mitochondria, and proton pumps in a rat glioma suggest coordinated programming for proliferation
    Article Snippet: The “Plot Profile” function was applied and the listed values pasted in GraphPad Prism.

    Article Title: A vascularized in vivo melanoma model suitable for metastasis research of different tumor stages using fundamentally different bioinks.
    Article Snippet: Figures show a box plot with whiskers or dot plots and were created with GraphPad Prism.

    Generated:

    Article Title: Cytoplasmic mRNA decay controlling inflammatory gene expression is determined by pre-mRNA fate decision.
    Article Snippet: Gibson assembly was performed following the manufacturer’s instruction (NEB, E2621S) and transformed into chemically competent DH10B E. coli. .. Data generated by the plot profile function were transferred to Graphpad to obtain profile plots depicting the intensity profiles of respective channels along the line. .. GFP was PCR-amplified from pEGFP-N1 (Clontech) and used for Gibson cloning.

    Labeling:

    Article Title: Adenylyl cyclase 6 enhances NKCC2 expression and mediates vasopressin-induced phosphorylation of NKCC2 and NCC.
    Article Snippet: Multiple regions of interest (five per labeled tubule, five tubules per animal), representing 4-mm single cross-sections through labeled DCT and mTAL cells, were selected, and distribution of pixel intensities from the apical cell pole through to the basolateral side was assessed using ImageJ v1.46 software (NIH). .. Using the plot profile function, the total pixel intensities in the initial 0.5 mm (representing the most apical NKCC2/NCC labeling) were analyzed by calculating the area under the curve using GraphPad Prism v5 (La Jolla, CA). .. Immunohistochemistry All procedures have been previously described in detail.29 Labeling was visualized by use of a peroxidase-conjugated 98 secondary antibody for light microscopy (P448, Dako, Glostrup, Denmark) and visualized with 0.05% 3,30-diaminobenzidine tetrachloride (Kemen Tek, Copenhagen, Denmark).

    Article Title: Adenylyl Cyclase 6 Enhances NKCC2 Expression and Mediates Vasopressin-Induced Phosphorylation of NKCC2 and NCC
    Article Snippet: Multiple regions of interest (five per labeled tubule, five tubules per animal), representing 4-μm single cross-sections through labeled DCT and mTAL cells, were selected, and distribution of pixel intensities from the apical cell pole through to the basolateral side was assessed using ImageJ v1.46 software (NIH). .. Using the plot profile function, the total pixel intensities in the initial 0.5 μm (representing the most apical NKCC2/NCC labeling) were analyzed by calculating the area under the curve using GraphPad Prism v5 (La Jolla, CA). ..

    Imaging:

    Article Title: Classification of antimicrobial mechanism of action using dynamic bacterial morphology imaging
    Article Snippet: .. The graphs of Plot Profile from each series of time-lapse imaging were then re-plotted into one heatmap with GraphPad Prism v8.4.1 to generate the DBMI patterns. ..

    Software:

    Article Title: Tobacco toxins induce osteoporosis through ferroptosis.
    Article Snippet: .. Plotting of the plot profile curves were done using Image J Software and GraphPad Software. ..

    Fluorescence:

    Article Title: Hydrocephalus in Nfix -/- Mice Is Underpinned by Changes in Ependymal Cell Physiology.
    Article Snippet: Images of fluorescence stains were opened in Fiji (ImageJ) and boxes of 150 pixels across by 20 pixels high were drawn perpendicular to cell junctions of adjacent cells with the centre of the box placed directly over the centre of the junction (Figure S2A). .. Average fluorescence intensity was measured at each pixel using the plot profile function (Figure S2B) and recorded in GraphPad Prism 8 (Graphpad, https://www.graphpad.com/scientific-software/prism/, accessed on 13 June 2022). ..



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    Image Search Results


    GenomeScope k-mer profile plot of the Illumina #R1 filtered reads. The black line shows the fit of the model to the observed k-mer frequencies (blue graph) at 0-170 coverage scale.

    Journal: Scientific Data

    Article Title: Chromosome-scale genome assembly and annotation of Paspalum notatum Flüggé var. saurae

    doi: 10.1038/s41597-024-03731-0

    Figure Lengend Snippet: GenomeScope k-mer profile plot of the Illumina #R1 filtered reads. The black line shows the fit of the model to the observed k-mer frequencies (blue graph) at 0-170 coverage scale.

    Article Snippet: Fig. 2 GenomeScope k-mer profile plot of the Illumina #R1 filtered reads.

    Techniques:

    Software and parameters used during the #R1 genome sequencing, assembly and annotation.

    Journal: Scientific Data

    Article Title: Chromosome-scale genome assembly and annotation of Paspalum notatum Flüggé var. saurae

    doi: 10.1038/s41597-024-03731-0

    Figure Lengend Snippet: Software and parameters used during the #R1 genome sequencing, assembly and annotation.

    Article Snippet: Fig. 2 GenomeScope k-mer profile plot of the Illumina #R1 filtered reads.

    Techniques: Software, Sequencing