percolator algorithm (Bruker Corporation)

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Bruker Corporation percolator algorithm
Percolator Algorithm, supplied by Bruker Corporation, used in various techniques. Bioz Stars score: 96/100, based on 956 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/percolator+algorithm/pmc11082194-252-21-35
Average 96 stars, based on 956 article reviews

percolator algorithm - by Bioz Stars, 2026-09

96/100 stars

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Software:

Article Title: NADPH oxidase isoform NOX-2 deficiency affects mitochondrial oxygen consumption and metabolic flexibility.
Article Snippet: .. The spectra were analyzed and calibrated with DataAnalysis software (Bruker) using sodium formate, and after peak list extraction, proteins were identified via ProteinScape (Bruker) utilizing the MASCOT server. ..

Article Title: Antibodies against tau epitopes
Article Snippet: Peptide masses were determined using a Bruker ultrafleXtreme Maldi mass spectrometer in reflectron mode and ms/ms fragmentation performed in LIFT mode. .. Data analysis was with FlexAnalysis, BioTools and ProteinScape software (Bruker, Billerica, MA, USA). ..

Article Title: Antibodies against tau epitopes
Article Snippet: .. BioTools and ProteinScape software (Bruker, Billerica, MA, USA). .. Database searches of the combined mass fingerprint-ms/ms data were performed using Mascot (http://www.matrixscience.com).

Article Title: Kallikrein 14 activates the chemoattractant protein chemerin in human skin.
Article Snippet: .. The data obtained were firstly processed using Compass DataAnalysis software, version 4.1 (Bruker Daltonics) and then searched via the ProteinScape 3.0 platform (Bruker Daltonics) using an in-house MASCOT server (v.2.5.1; Matrix Science) against common protein contaminant database supplemented with the sequence of chemerin. ..

Article Title: NADPH oxidase isoform NOX-2 deficiency affects mitochondrial oxygen consumption and metabolic flexibility
Article Snippet: .. The spectra were analyzed and calibrated with DataAnalysis software (Bruker) using sodium formate, and after peak list extraction, proteins were identified via ProteinScape (Bruker) utilizing the MASCOT server. ..

Article Title: Kallikrein 14 activates the chemoattractant protein chemerin in human skin
Article Snippet: .. The data obtained were first processed using Compass DataAnalysis software, version 4.1 (Bruker Daltonics) and then searched via the ProteinScape 3.0 platform (Bruker Daltonics) using an in-house MASCOT server (version 2.5.1; Matrix Science) against a common protein contaminant database supplemented with the sequence of chemerin. ..

Extraction:

Generated:

Article Title: Comparative analysis of red deer milk proteins throughout lactation using quantitative proteomics.
Article Snippet: .. Sample protocol lists were generated for each pooled sample using ProteinScape version 4.0 (Bruker, Billerica, MA), and subsequently, pooled samples, consisting of all whey samples, were rerun to identify lower abundance peptides. .. Protein Identification and Quantification Peptides and proteins were identified using PEAKS Studio version 10.6 (Bioinformatics Solutions Inc., Toronto, ON, Canada).

Sequencing:

Tandem Mass Spectroscopy:

Article Title: Dimerization of human PARP15 is required for NAD + binding and automodification
Article Snippet: All data were exported from DataAnalysis (Bruker). .. MS/MS data of the non-deuterated samples were compared against the sample sequences in ProteinScape (Bruker), whereby the signals of intact peptides were identified. ..

Review