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multiple sequence alignment analysis  (DNASTAR)


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    Structured Review

    DNASTAR multiple sequence alignment analysis
    Multiple Sequence Alignment Analysis, supplied by DNASTAR, used in various techniques. Bioz Stars score: 99/100, based on 11736 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/multiple+sequence+alignment+analysis/pm39799496-40-5-12
    Average 99 stars, based on 11736 article reviews
    multiple sequence alignment analysis - by Bioz Stars, 2026-11
    99/100 stars

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    Related Articles

    Software:

    Article Title: First Isolation, Genomic Characterization and Experimental Infection of Bovine Coronavirus from Sheep
    Article Snippet: PCR products were examined by agarose gel electrophoresis, purified using a PCR purification kit (Tiangen Biotech Co., Ltd., Beijing, China; Cat. No. DP214-02), cloned into the pMD19-T vector (Takara, Japan; Cat. No. 6013), and subjected to Sanger sequencing by Chengdu Qinke Biotechnology Co., Ltd. (Chengdu, China). .. The Sangerderived sequences were aligned with the metagenomic assemblies using SeqMan software in the DNASTAR Lasergene package version 7.1 (DNASTAR Inc., Madison, WI, USA). ..

    Article Title: Restoration of infectivity-virulence and toxin biosynthesis in Botrytis cinerea B459 via upstream-targeted marker-free CRISPR/Cas9 editing of the transcription factor Bcin04g03490.
    Article Snippet: For sgRNA purification, RNA Clean and Concentrator 25 (ref.Rl O18; Zymo Research; USA) was used. .. Sequence analysis utilized software from the DNASTAR Lasergene package (DNASTAR; USA). .. Oligonucleotides (Table S1) were sourced from Metabion (Metabion International AG; Germany).

    Article Title: Co-circulation of H5N1 and H5N6 high pathogenicity avian influenza viruses in migratory birds at a coastal wintering site in China.
    Article Snippet: The amplified products were sent to Comate Bioscience Co., Ltd. (Changchun, China) for Sanger sequencing. .. Viral gene segments were analysed using the DNAStar Lasergene software package. ..

    Article Title: Immunogenicity of recombinant porcine parainfluenza virus 5 expressing the spike protein of porcine epidemic diarrhea virus.
    Article Snippet: The porcine epidemic diarrhea virus (PEDV) induces severe diarrhea in neonatal piglets, often resulting in high mortality rates.. Consequently, the development of effective and safe vaccines is a critical priority for controlling PEDV infection.. Vaccines vectored by the parainfluenza virus 5 (PIV5) exhibit distinct advantages in terms of safety, genomic stability, and immunogenicity.

    Article Title: Otx2 directly regulates tbx3 expression during early eye formation.
    Article Snippet: After identification of 10k base pairs upstream and downstream the tbx3 gene for each species in NCBI:Gene or Ensembl.org, ECR were identified using ECR Browser (http://ecrbrowser.dcode.org) and MultiPIPMaker, as previously described (Ogino et al., 2006; Ledford et al., 2017). .. All sequence analysis was performed using the Lasergene Software Package (DNASTAR, Madison, WI). .. Putative transcription factor binding sites were identified using rVista (rvista.dcode.org) with a TRANSFAC professional v10.2 library.

    Article Title: Structural analyses of a heterodimeric SusCD complex captures intermediate states of maltooligosaccharide transport.
    Article Snippet: .. Burland, T. G. (2000) DNASTAR's Lasergene sequence analysis software. ..

    Article Title: Chitinase production and effects of land use change on fungal communities in the soil of the Brazilian Cerrado.
    Article Snippet: The resulting amplicons were subjected to Sanger sequencing at Instituto René Rachou (FIOCRUZ Minas). .. Sanger sequencing chromatograms were processed using DNASTAR Lasergene software to generate consensus ITS sequences. ..

    Sequencing:

    Article Title: Restoration of infectivity-virulence and toxin biosynthesis in Botrytis cinerea B459 via upstream-targeted marker-free CRISPR/Cas9 editing of the transcription factor Bcin04g03490.
    Article Snippet: For sgRNA purification, RNA Clean and Concentrator 25 (ref.Rl O18; Zymo Research; USA) was used. .. Sequence analysis utilized software from the DNASTAR Lasergene package (DNASTAR; USA). .. Oligonucleotides (Table S1) were sourced from Metabion (Metabion International AG; Germany).

    Article Title: Immunogenicity of recombinant porcine parainfluenza virus 5 expressing the spike protein of porcine epidemic diarrhea virus.
    Article Snippet: The porcine epidemic diarrhea virus (PEDV) induces severe diarrhea in neonatal piglets, often resulting in high mortality rates.. Consequently, the development of effective and safe vaccines is a critical priority for controlling PEDV infection.. Vaccines vectored by the parainfluenza virus 5 (PIV5) exhibit distinct advantages in terms of safety, genomic stability, and immunogenicity.

    Article Title: Otx2 directly regulates tbx3 expression during early eye formation.
    Article Snippet: After identification of 10k base pairs upstream and downstream the tbx3 gene for each species in NCBI:Gene or Ensembl.org, ECR were identified using ECR Browser (http://ecrbrowser.dcode.org) and MultiPIPMaker, as previously described (Ogino et al., 2006; Ledford et al., 2017). .. All sequence analysis was performed using the Lasergene Software Package (DNASTAR, Madison, WI). .. Putative transcription factor binding sites were identified using rVista (rvista.dcode.org) with a TRANSFAC professional v10.2 library.

    Article Title: Structural analyses of a heterodimeric SusCD complex captures intermediate states of maltooligosaccharide transport.
    Article Snippet: .. Burland, T. G. (2000) DNASTAR's Lasergene sequence analysis software. ..

    Analysis:

    Article Title: Restoration of infectivity-virulence and toxin biosynthesis in Botrytis cinerea B459 via upstream-targeted marker-free CRISPR/Cas9 editing of the transcription factor Bcin04g03490.
    Article Snippet: For sgRNA purification, RNA Clean and Concentrator 25 (ref.Rl O18; Zymo Research; USA) was used. .. Sequence analysis utilized software from the DNASTAR Lasergene package (DNASTAR; USA). .. Oligonucleotides (Table S1) were sourced from Metabion (Metabion International AG; Germany).

    Article Title: Otx2 directly regulates tbx3 expression during early eye formation.
    Article Snippet: After identification of 10k base pairs upstream and downstream the tbx3 gene for each species in NCBI:Gene or Ensembl.org, ECR were identified using ECR Browser (http://ecrbrowser.dcode.org) and MultiPIPMaker, as previously described (Ogino et al., 2006; Ledford et al., 2017). .. All sequence analysis was performed using the Lasergene Software Package (DNASTAR, Madison, WI). .. Putative transcription factor binding sites were identified using rVista (rvista.dcode.org) with a TRANSFAC professional v10.2 library.

    Article Title: Structural analyses of a heterodimeric SusCD complex captures intermediate states of maltooligosaccharide transport.
    Article Snippet: .. Burland, T. G. (2000) DNASTAR's Lasergene sequence analysis software. ..

    Hemagglutination Assay:

    Article Title: H9N2 avian influenza virus in Muscovy ducks: a nationwide epidemiological survey and vaccine efficacy assessment.
    Article Snippet: For molecular identification, reverse transcription (RT)-PCR was performed to amplify the HA genes via specific primers (HA-F: 5′- CAA GAT GGA AGT AGT ATC ACT-3′; HA-R: 5′- TTG CCA ATT ATA TAC AAA TGT − 3′), and the resulting PCR products were sequenced by Shanghai Sangon Biotech. .. Nucleotide sequences of the HA gene were assembled via DNAstar Lasergene 11. ..

    DNA Sequencing:

    Article Title: Chitinase production and effects of land use change on fungal communities in the soil of the Brazilian Cerrado.
    Article Snippet: The resulting amplicons were subjected to Sanger sequencing at Instituto René Rachou (FIOCRUZ Minas). .. Sanger sequencing chromatograms were processed using DNASTAR Lasergene software to generate consensus ITS sequences. ..



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