microarray data analysis tool software package (Filgen Inc)

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Filgen Inc microarray data analysis tool software package
$A, Electrophoresis of whole serum (WS) or fractionated serum IgG derived from a systemic lupus erythematosus (SLE) patient (L) and a normal subject (N). Molecular weight marker (M) is shown at the right. B, Scatterplot of entire gene set considered by <t>microarray</t> analysis to be expressed in podocytes (P < 0.05). The position of each dot on the scatterplot corresponds to the normalized average signal intensity (log scale) of a single gene. The normalized average signal intensity after exposure to SLE IgG and normal IgG is shown on the x and y axes, respectively. Broken red lines represent normal IgG:SLE IgG ratios of 2.0 (top; 2-fold greater expression in normal IgG) and 0.5 (bottom; 2-fold greater expression in SLE IgG). Black broken line is the mean.$
Microarray Data Analysis Tool Software Package, supplied by Filgen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/microarray+data+analysis+tool+software+package/microarray+data+analysis+tool/pmc06103450-168-7-13
Average 90 stars, based on 1 article reviews

microarray data analysis tool software package - by Bioz Stars, 2026-09

90/100 stars

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1) Product Images from "Lupus Nephritis IgG Induction of Calcium/Calmodulin-Dependent Protein Kinase IV Expression in Podocytes and Alteration of Their Function"

Article Title: Lupus Nephritis IgG Induction of Calcium/Calmodulin-Dependent Protein Kinase IV Expression in Podocytes and Alteration of Their Function

Journal: Arthritis & rheumatology (Hoboken, N.J.)

doi: 10.1002/art.39499

$A, Electrophoresis of whole serum (WS) or fractionated serum IgG derived from a systemic lupus erythematosus (SLE) patient (L) and a normal subject (N). Molecular weight marker (M) is shown at the right. B, Scatterplot of entire gene set considered by microarray analysis to be expressed in podocytes (P < 0.05). The position of each dot on the scatterplot corresponds to the normalized average signal intensity (log scale) of a single gene. The normalized average signal intensity after exposure to SLE IgG and normal IgG is shown on the x and y axes, respectively. Broken red lines represent normal IgG:SLE IgG ratios of 2.0 (top; 2-fold greater expression in normal IgG) and 0.5 (bottom; 2-fold greater expression in SLE IgG). Black broken line is the mean.$
Figure Legend Snippet: A, Electrophoresis of whole serum (WS) or fractionated serum IgG derived from a systemic lupus erythematosus (SLE) patient (L) and a normal subject (N). Molecular weight marker (M) is shown at the right. B, Scatterplot of entire gene set considered by microarray analysis to be expressed in podocytes (P < 0.05). The position of each dot on the scatterplot corresponds to the normalized average signal intensity (log scale) of a single gene. The normalized average signal intensity after exposure to SLE IgG and normal IgG is shown on the x and y axes, respectively. Broken red lines represent normal IgG:SLE IgG ratios of 2.0 (top; 2-fold greater expression in normal IgG) and 0.5 (bottom; 2-fold greater expression in SLE IgG). Black broken line is the mean.

Techniques Used: Electrophoresis, Derivative Assay, Molecular Weight, Marker, Microarray, Expressing

Microarray:

Article Title: Vitamin D improves pulmonary function in a rat model for congenital diaphragmatic hernia.
Article Snippet: A congenital diaphragmatic hernia (CDH) is an anomaly caused by defects in the diaphragm; the resulting limited thorax cavity in turn restricts lung growth (pulmonary hypoplasia).. This condition is related to pulmonary hypertension.. Despite advances in neonatal CDH therapy, the mortality for severe pulmonary hypoplasia remains high.

Article Title: Progranulin depletion inhibits proliferation via the transforming growth factor beta/SMAD family member 2 signaling axis in Kasumi-1 cells
Article Snippet: In the mRNA microarray analysis, procedures for reverse transcription, labeling, and microarray experiments were performed using Clariom D assay for human samples (Thermo Fisher Scientific, MA, USA) by Filgen Inc. (Aichi, Japan). .. A microarray data analysis tool (Filgen, Aichi, Japan) was used to identify differentially expressed pathways and genes. .. In the RT-qPCR analysis, reverse transcription and qPCR were performed using the PrimeScript RT Reagent Kit (TaKaRa Bio, Shiga, Japan) and PowerUp SYBR Green Master Mix (Applied Biosystems, CA, USA) based on the manufacturer's instruction.

Article Title: Ammonia impairs tight junction barriers by inducing mitochondrial dysfunction in Caco‐2 cells
Article Snippet: © 2021 Federation of American Societies for Experimental Biology Abbreviations: CKD, chronic kidney disease; ERK1/2, extracellular signalregulated kinase1/2; FD4, fluorescein isothiocyanatedextran; GO, gene ontology; Gpx, glutathione peroxidase; GSH, reduced form of glutathione; Gsr, glutathione reductase; GSSG, oxidized form of glutathione; IgG, immunoglobulin; IL, interleukin; JNK1/2, Jun Nterminal kinase1/2; MAPK, mitogenactivated protein kinase; NAC, Nacetyl cysteine; qRTPCR, quantitative reverse transcriptionpolymerase chain reaction; ROS, reactive oxygen species; SDS, sodium dodecyl sulfate; TCA, tricarboxylic acid; TER, transepithelial electrical resistance; TJ, tight junction; ZO, zonula occludens.. 1Graduate School of Integrated Sciences for Life, Hiroshima University, HigashiHiroshima, Japan 2Graduate School of Biosphere Science, Hiroshima University, HigashiHiroshima, Japan

Article Title: Increased fatty acid synthesis and disturbed lipid metabolism in Neuro2a cells after repeated cocaine exposure: A preliminary study.
Article Snippet: Chronic use of cocaine prompts neurodegeneration and neuroinflammation.. Lipids play pivotal roles in neuronal function and pathology.. Although evidence correlates cocaine use with the alteration of lipid metabolism in blood and brain, the precise mechanism remains to be elucidated.

Article Title: Sustained splenic contraction after daily cocaine administration in rats
Article Snippet: The purified total RNA was examined for integrity on a BioAnalyzer (Agilent Technologies), and hybridized to Clariom TM S array (Thermo Fisher Scientific). .. The results were deposited in the GEO database ( https://www.ncbi.nlm.nih.gov/geo/ , accession number GSE167238) and analyzed using the Microarray Data Analysis Tool (Filgen Inc, Nagoya, Japan) and the DAVID functional annotation tool ( https://david.ncifcrf.gov/summary.jsp ). ..

Article Title: microRNA-203 inhibits migration and invasion of canine tonsillar squamous cell carcinoma cells by targeting SLUG
Article Snippet: .. The data were analyzed using the Microarray Data Analysis tool (Filgen, Inc., Aichi, Japan), and miRNAs showing >2-fold differential expression are indicated in a heatmap. ..

Article Title: Detection of Potential Markers for Lip Vermilion Epithelium in Japanese Macaques Based on the Results of Gene Expression Profile
Article Snippet: .. Microarray data were analyzed using a microarray data analysis tool (Filgen, Nagoya, Japan). ..

Software:

Functional Assay:

Quantitative Proteomics:

other:

Article Title: Augmented effect of fibroblast growth factor 18 in bone morphogenetic protein 2-induced calvarial bone healing by activation of CCL2/CCR2 axis on M2 macrophage polarization
Article Snippet: Data were analyzed by the Expression ConsoleTM Software (Thermo Fisher Scientific Inc., USA) and the target gene list was sorted by the Microarray Dara Analysis Tool (Filgen Inc., Japan) and Microsoft Excel (Microsoft Corporation, USA).

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