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Bioarray Inc base bioarray software environment
Base Bioarray Software Environment, supplied by Bioarray Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/base+bioarray+software+environment/bioarray+software/pmc02798261-135-12-13
Average 90 stars, based on 1 article reviews
base bioarray software environment - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

other:

Article Title: Identification of a Gene Expression Signature for Survival Prediction in Type I Endometrial Carcinoma
Article Snippet: The expression raw data extracted from the microarray analysis were initially processed in BASE (BioArray Software Environmental) ( 19 ).

Article Title: Minimizing inequality in access to precision medicine in breast cancer by real‐time population‐based molecular analysis in the SCAN‐B initiative
Article Snippet: A customized laboratory information management system (LIMS), BioArray Software Environment (BASE), has also been established to enable description of the representativeness of the population‐based sample, as well as routines for the retraction of informed consent , , , .

Article Title: Identification of biomarkers associated with extracellular vesicles based on an integrative pan-cancer bioinformatics analysis.
Article Snippet: Extracellular vesicle (EV) has received increasing attention over the last decade.. However, biomarkers and mechanisms underlying remain largely limited.. Three microarray profiles, GSE78718 (K562 leukemia cell line), GSE45301 (U87-MG glioblastoma cell line), and GSE9589 (SW480 colon cancer cell line), were analyzed for the overlapped differentially expressed genes (DEGs).

Article Title: Hedgehog inhibitor sonidegib potentiates 177 Lu-octreotate therapy of GOT1 human small intestine neuroendocrine tumors in nude mice
Article Snippet: In the transcriptional analysis, data pre-processing and quantile normalization were performed on the raw signal intensities using the web-based BioArray Software Environment (BASE) system.

Article Title: Transcriptional response of kidney tissue after 177Lu-octreotate administration in mice.
Article Snippet: Data preprocessing and quantile normalization of raw signal intensities were conducted through the use of the web-based BioArray Software Environment (BASE) system.

Gene Expression:

Article Title: Transcriptional effects of 177 Lu-octreotate therapy using a priming treatment schedule on GOT1 tumor in nude mice.
Article Snippet: .. BASE: BioArray software environment; GEO: Gene Expression Omnibus; GO: Gene Ontology; IPA: Ingenuity Pathway Analysis; MIRD: Medical internal radiation dose; NCBI: National Center for Biotechnology Information; NET: Neuroendocrine tumor; qRT-PCR: Quantitative reverse transcriptionpolymerase chain reaction; SCIBLU: Swegene Center for Integrative Biology; SSTR: Somatostatin receptor; UPR: Unfolded protein response ..

Indirect Immunoperoxidase Assay:

Article Title: Transcriptional effects of 177 Lu-octreotate therapy using a priming treatment schedule on GOT1 tumor in nude mice.
Article Snippet: .. BASE: BioArray software environment; GEO: Gene Expression Omnibus; GO: Gene Ontology; IPA: Ingenuity Pathway Analysis; MIRD: Medical internal radiation dose; NCBI: National Center for Biotechnology Information; NET: Neuroendocrine tumor; qRT-PCR: Quantitative reverse transcriptionpolymerase chain reaction; SCIBLU: Swegene Center for Integrative Biology; SSTR: Somatostatin receptor; UPR: Unfolded protein response ..

Software:

Article Title: Methods for the diagnosis of fetal abnormalities
Article Snippet: .. All normalizations and analyses are carried out using analysis software, such as the BioArray Software Environment database. ..

Article Title: Concordance between RNA-sequencing data and DNA microarray data in transcriptome analysis of proliferative and quiescent fibroblasts
Article Snippet: .. Analysis of raw datasets was performed using the online microarray database software BioArray Software Environment (BASE) [ ], with which cross-channel correction and LOWESS normalization were performed. ..

Microarray:

Article Title: Concordance between RNA-sequencing data and DNA microarray data in transcriptome analysis of proliferative and quiescent fibroblasts
Article Snippet: .. Analysis of raw datasets was performed using the online microarray database software BioArray Software Environment (BASE) [ ], with which cross-channel correction and LOWESS normalization were performed. ..



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