Review



illumina-based transcriptome assembly and annotation  (Illumina Inc)


Bioz Verified Symbol Illumina Inc is a verified supplier  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 90
      Buy from Supplier

    Structured Review

    Illumina Inc illumina-based transcriptome assembly and annotation
    Illumina Based Transcriptome Assembly And Annotation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/illumina+transcriptome+assembly/pm38835170-445-14-14
    Average 90 stars, based on 1 article reviews
    illumina-based transcriptome assembly and annotation - by Bioz Stars, 2026-10
    90/100 stars

    Images

    Related Articles

    Agarose Gel Electrophoresis:

    Article Title: De novo sequencing, assembly, and characterization of Asparagus racemosus transcriptome and analysis of expression profile of genes involved in the flavonoid biosynthesis pathway
    Article Snippet: .. The quality of total RNA was checked on agarose gel-electrophoresis and utilized for de novo transcriptome Illumina sequencing analysis ( ). .. Illumina Hi-Seq Platform sequencing results of cDNAs prepared from total RNA resulted in 23,101,000 high-quality reads (2 × 150 bp; 6,667,619,278 nucleotides) with paired-end raw reads (∼6.6 GB) from the pooled assembled transcript of roots and leaf samples of A. racemosus ( ).

    Sequencing:

    Article Title: Identification of differentially expressed miRNAs and their target genes in response to brassinolide treatment on flowering of tree peony ( Paeonia ostii )
    Article Snippet: .. Based on Illumina-based de novo transcriptome sequencing, 291 unigene sequences associated with early and late flowering were identified in tree peony by bulked segregant RNA-seq (BSR-seq). ..

    RNA Sequencing:

    Article Title: Identification of differentially expressed miRNAs and their target genes in response to brassinolide treatment on flowering of tree peony ( Paeonia ostii )
    Article Snippet: .. Based on Illumina-based de novo transcriptome sequencing, 291 unigene sequences associated with early and late flowering were identified in tree peony by bulked segregant RNA-seq (BSR-seq). ..

    other:

    Article Title: Transcriptome analysis of mulberry ( Morus alba L.) leaves to identify differentially expressed genes associated with post-harvest shelf-life elongation
    Article Snippet: Illumina-based transcriptome assembly, although based on short read sequencing technology, generates a wide range of transcriptome coverage helpful in identifying genes involved in different processes .

    Article Title: The biosynthetic pathway of the hallucinogen mescaline and its heterologous reconstruction.
    Article Snippet: Mescaline, among the earliest identified natural hallucinogens, holds great potential in psychotherapy treatment.. Nonetheless, despite the existence of a postulated biosynthetic pathway for more than half a century, the specific enzymes involved in this process are yet to be identified.. In this study, we investigated the cactus Lophophora williamsii (Peyote), the largest known natural producer of the phenethylamine mescaline.

    Article Title: Transcriptome analysis of mulberry (Morus alba L.) leaves to identify differentially expressed genes associated with post-harvest shelf-life elongation.
    Article Snippet: Illumina-based transcriptome assembly, although based on short read sequencing technology, generates a wide range of transcriptome coverage helpful in identifying genes involved in different processes26.

    RNA sequencing:

    Article Title: Differential Transcriptome Analysis Reveals Genes Related to Low- and High-Temperature Stress in the Fall Armyworm, Spodoptera frugiperda .
    Article Snippet: De novo Assembly Illumina short reads were quality-filtered and adapter-trimmed using Trimmomatic v0.38.1 FastQC v0.11.72 was used to check data quality before and after trimming. .. After the removal of low-quality reads, an Illumina-based de novo transcriptome assembly was performed using Trinity version trinity rnaseq r20140717, bowtie 1.1.2 (Langmead et al., 2009). ..



    Similar Products

    assembly and annotation of the chinese chive transcriptome  (Illumina Inc)
    90
    Illumina Inc assembly and annotation of the chinese chive transcriptome
    Assembly And Annotation Of The Chinese Chive Transcriptome, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/transcriptome+assembly/pm40122824-381-7-17
    Average 90 stars, based on 1 article reviews
    assembly and annotation of the chinese chive transcriptome - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    sequencing data for genome assembly and annotation and transcriptome data for salix mesnyi and salix triandra  (Biotechnology Information)
    90
    Biotechnology Information sequencing data for genome assembly and annotation and transcriptome data for salix mesnyi and salix triandra
    Sequencing Data For Genome Assembly And Annotation And Transcriptome Data For Salix Mesnyi And Salix Triandra, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/sequencing+data+for+genome+assembly+and+annotation+and+transcriptome+data+for+salix+mesnyi+and+salix+triandra/pm39530333-325-14-24
    Average 90 stars, based on 1 article reviews
    sequencing data for genome assembly and annotation and transcriptome data for salix mesnyi and salix triandra - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    genome sequencing, assembly, annotation, and transcriptome  (Novogene)
    90
    Novogene genome sequencing, assembly, annotation, and transcriptome
    Genome Sequencing, Assembly, Annotation, And Transcriptome, supplied by Novogene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/genome+assembly/pmc11568676-100-5-9
    Average 90 stars, based on 1 article reviews
    genome sequencing, assembly, annotation, and transcriptome - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    transcriptome assembly and annotation  (Novogene)
    90
    Novogene transcriptome assembly and annotation
    Transcriptome Assembly And Annotation, supplied by Novogene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/transcriptome+assembly+and+annotation+protocols/pm39226952-109-0-7
    Average 90 stars, based on 1 article reviews
    transcriptome assembly and annotation - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    sequencing, de novo assembly, functional annotation and analysis of phyllanthus amarus leaf transcriptome  (Illumina Inc)
    90
    Illumina Inc sequencing, de novo assembly, functional annotation and analysis of phyllanthus amarus leaf transcriptome
    Sequencing, De Novo Assembly, Functional Annotation And Analysis Of Phyllanthus Amarus Leaf Transcriptome, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/sequencing++de+novo+assembly++functional+annotation+and+analysis+of+phyllanthus+amarus+leaf+transcriptome/10__1002_slash_csc2__21313-199-0-15
    Average 90 stars, based on 1 article reviews
    sequencing, de novo assembly, functional annotation and analysis of phyllanthus amarus leaf transcriptome - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    illumina-based transcriptome assembly and annotation  (Illumina Inc)
    90
    Illumina Inc illumina-based transcriptome assembly and annotation
    Illumina Based Transcriptome Assembly And Annotation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/illumina+transcriptome+assembly/pm38835170-445-14-14
    Average 90 stars, based on 1 article reviews
    illumina-based transcriptome assembly and annotation - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    transcriptome assembly and annotation protocols  (Novogene)
    90
    Novogene transcriptome assembly and annotation protocols
    Transcriptome Assembly And Annotation Protocols, supplied by Novogene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/transcriptome+assembly+and+annotation+protocols/pm38522379-63-3-10
    Average 90 stars, based on 1 article reviews
    transcriptome assembly and annotation protocols - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    transcriptome sequencing, assembly, and annotation  (Novogene)
    90
    Novogene transcriptome sequencing, assembly, and annotation
    Transcriptome Sequencing, Assembly, And Annotation, supplied by Novogene, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/transcriptome+assembly+and+annotation+protocols/pm38147806-62-21-12
    Average 90 stars, based on 1 article reviews
    transcriptome sequencing, assembly, and annotation - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    de novo transcriptome assembly and annotation  (Denovo Biotechnology)
    90
    Denovo Biotechnology de novo transcriptome assembly and annotation
    Global overview of the Pyropia haitanensis <t>transcriptome</t> under different light irradiance conditions. ( A ) Principal component analysis (PCA); ( B ) Venn diagram analysis; ( C ) number of differentially expressed genes. LIS-CK vs. LIS-LI1d, comparison between the control sample of LIS strain and the sample exposed to low irradiance for 1 day; LIS-CK vs. LIS-LI4d, comparison between the control sample of LIS strain and the sample exposed to low irradiance for 4 days; LIT-CK vs. LIT-LI1d, comparison between the control sample of LIT strain and the sample exposed to low irradiance for 1 day; LIT-CK vs. LIT-LI4d, comparison between the control sample of LIT strain and the sample exposed to low irradiance for 4 days. LIT, low irradiance-tolerant strain; LIS, low irradiance-sensitive strain. UP, up-regulated genes; DOWN, down-regulated genes.
    De Novo Transcriptome Assembly And Annotation, supplied by Denovo Biotechnology, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/annotated+transcriptome+assembly/de+novo+transcriptome+assembly+and+annotation/pmc09965670-46-0-14
    Average 90 stars, based on 1 article reviews
    de novo transcriptome assembly and annotation - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier

    Image Search Results


    Global overview of the Pyropia haitanensis transcriptome under different light irradiance conditions. ( A ) Principal component analysis (PCA); ( B ) Venn diagram analysis; ( C ) number of differentially expressed genes. LIS-CK vs. LIS-LI1d, comparison between the control sample of LIS strain and the sample exposed to low irradiance for 1 day; LIS-CK vs. LIS-LI4d, comparison between the control sample of LIS strain and the sample exposed to low irradiance for 4 days; LIT-CK vs. LIT-LI1d, comparison between the control sample of LIT strain and the sample exposed to low irradiance for 1 day; LIT-CK vs. LIT-LI4d, comparison between the control sample of LIT strain and the sample exposed to low irradiance for 4 days. LIT, low irradiance-tolerant strain; LIS, low irradiance-sensitive strain. UP, up-regulated genes; DOWN, down-regulated genes.

    Journal: Life

    Article Title: Investigating the Mechanisms Underlying the Low Irradiance-Tolerance of the Economically Important Seaweed Species Pyropia haitanensis

    doi: 10.3390/life13020481

    Figure Lengend Snippet: Global overview of the Pyropia haitanensis transcriptome under different light irradiance conditions. ( A ) Principal component analysis (PCA); ( B ) Venn diagram analysis; ( C ) number of differentially expressed genes. LIS-CK vs. LIS-LI1d, comparison between the control sample of LIS strain and the sample exposed to low irradiance for 1 day; LIS-CK vs. LIS-LI4d, comparison between the control sample of LIS strain and the sample exposed to low irradiance for 4 days; LIT-CK vs. LIT-LI1d, comparison between the control sample of LIT strain and the sample exposed to low irradiance for 1 day; LIT-CK vs. LIT-LI4d, comparison between the control sample of LIT strain and the sample exposed to low irradiance for 4 days. LIT, low irradiance-tolerant strain; LIS, low irradiance-sensitive strain. UP, up-regulated genes; DOWN, down-regulated genes.

    Article Snippet: De novo transcriptome assembly and annotation (as described by Illumina) were completed by Gene Denovo Biotechnology Co., Ltd. (Guangzhou, China).

    Techniques: Comparison, Control