xmai Thermo Fisher Search Results


  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
  • 94
    Thermo Fisher cfr9i
    Dendrogram showing the genetic relationship of 50 macrolide-resistant Streptococcus pyogenes established from PFGE patterns obtained after Sma I and <t>Cfr</t> 9I digestion and their antibiotic resistance gene content. The dendrogram, to the left, compares the percent of genetic relatedness among resistant isolates. The level at which the vertical line transects the horizontal line from the PFGE of each isolate determines its similarity based on the percent scale above the dendrogram. PFGE clusters were defined as isolates sharing at least 80% similarity. Each major lineage is designated by a capital letter. PFGE, pulsed-field gel electrophoresis.
    Cfr9i, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 44 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/cfr9i/product/Thermo Fisher
    Average 94 stars, based on 44 article reviews
    Price from $9.99 to $1999.99
    cfr9i - by Bioz Stars, 2020-07
    94/100 stars
      Buy from Supplier

    92
    Thermo Fisher xmai
    Dendrogram showing the genetic relationship of 50 macrolide-resistant Streptococcus pyogenes established from PFGE patterns obtained after Sma I and <t>Cfr</t> 9I digestion and their antibiotic resistance gene content. The dendrogram, to the left, compares the percent of genetic relatedness among resistant isolates. The level at which the vertical line transects the horizontal line from the PFGE of each isolate determines its similarity based on the percent scale above the dendrogram. PFGE clusters were defined as isolates sharing at least 80% similarity. Each major lineage is designated by a capital letter. PFGE, pulsed-field gel electrophoresis.
    Xmai, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 92/100, based on 255 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/xmai/product/Thermo Fisher
    Average 92 stars, based on 255 article reviews
    Price from $9.99 to $1999.99
    xmai - by Bioz Stars, 2020-07
    92/100 stars
      Buy from Supplier

    93
    Thermo Fisher xmai bsmi sites
    Dendrogram showing the genetic relationship of 50 macrolide-resistant Streptococcus pyogenes established from PFGE patterns obtained after Sma I and <t>Cfr</t> 9I digestion and their antibiotic resistance gene content. The dendrogram, to the left, compares the percent of genetic relatedness among resistant isolates. The level at which the vertical line transects the horizontal line from the PFGE of each isolate determines its similarity based on the percent scale above the dendrogram. PFGE clusters were defined as isolates sharing at least 80% similarity. Each major lineage is designated by a capital letter. PFGE, pulsed-field gel electrophoresis.
    Xmai Bsmi Sites, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 93/100, based on 9 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/xmai bsmi sites/product/Thermo Fisher
    Average 93 stars, based on 9 article reviews
    Price from $9.99 to $1999.99
    xmai bsmi sites - by Bioz Stars, 2020-07
    93/100 stars
      Buy from Supplier

    86
    Thermo Fisher xmai nhei fragment
    Dendrogram showing the genetic relationship of 50 macrolide-resistant Streptococcus pyogenes established from PFGE patterns obtained after Sma I and <t>Cfr</t> 9I digestion and their antibiotic resistance gene content. The dendrogram, to the left, compares the percent of genetic relatedness among resistant isolates. The level at which the vertical line transects the horizontal line from the PFGE of each isolate determines its similarity based on the percent scale above the dendrogram. PFGE clusters were defined as isolates sharing at least 80% similarity. Each major lineage is designated by a capital letter. PFGE, pulsed-field gel electrophoresis.
    Xmai Nhei Fragment, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/xmai nhei fragment/product/Thermo Fisher
    Average 86 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    xmai nhei fragment - by Bioz Stars, 2020-07
    86/100 stars
      Buy from Supplier

    85
    Thermo Fisher pdisplay invitrogen xmai
    Dendrogram showing the genetic relationship of 50 macrolide-resistant Streptococcus pyogenes established from PFGE patterns obtained after Sma I and <t>Cfr</t> 9I digestion and their antibiotic resistance gene content. The dendrogram, to the left, compares the percent of genetic relatedness among resistant isolates. The level at which the vertical line transects the horizontal line from the PFGE of each isolate determines its similarity based on the percent scale above the dendrogram. PFGE clusters were defined as isolates sharing at least 80% similarity. Each major lineage is designated by a capital letter. PFGE, pulsed-field gel electrophoresis.
    Pdisplay Invitrogen Xmai, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 85/100, based on 24 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/pdisplay invitrogen xmai/product/Thermo Fisher
    Average 85 stars, based on 24 article reviews
    Price from $9.99 to $1999.99
    pdisplay invitrogen xmai - by Bioz Stars, 2020-07
    85/100 stars
      Buy from Supplier

    91
    Thermo Fisher rrbs samples xmai rrbs data
    Experimental validation of cuRRBS. ( A ) Barplots showing the number of true positives (TP, in green), true negatives (TN, in blue), false positives (FP, in red) and false negatives (FN, in orange) when comparing cuRRBS theoretical prediction with the actual <t>XmaI-RRBS</t> experimental data ( 30 ). The number of sites in each category is calculated for different thresholds in the depth of coverage (number of reads covering a CpG site as reported by Bismark). cuRRBS prediction for the CpG sites in human CpG islands was obtained enforcing a theoretical size range of 90–185 bp and running the software for XmaI with all the default parameters (with a read length of 200 bp). Legend is displayed on the right hand side. ( B ) Plot showing values of cuRRBS sensitivity (in light green) and specificity (in cyan) as a function of the depth of coverage threshold employed to filter the experimental data ( 30 ). The number of true positives (TP), true negatives (TN), false positives (FP) and false negatives (FN) are the same as in A. Legend is displayed below the plot curves.
    Rrbs Samples Xmai Rrbs Data, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 91/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/rrbs samples xmai rrbs data/product/Thermo Fisher
    Average 91 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    rrbs samples xmai rrbs data - by Bioz Stars, 2020-07
    91/100 stars
      Buy from Supplier

    88
    Thermo Fisher synthetic bsteii xmai dna fragment
    Experimental validation of cuRRBS. ( A ) Barplots showing the number of true positives (TP, in green), true negatives (TN, in blue), false positives (FP, in red) and false negatives (FN, in orange) when comparing cuRRBS theoretical prediction with the actual <t>XmaI-RRBS</t> experimental data ( 30 ). The number of sites in each category is calculated for different thresholds in the depth of coverage (number of reads covering a CpG site as reported by Bismark). cuRRBS prediction for the CpG sites in human CpG islands was obtained enforcing a theoretical size range of 90–185 bp and running the software for XmaI with all the default parameters (with a read length of 200 bp). Legend is displayed on the right hand side. ( B ) Plot showing values of cuRRBS sensitivity (in light green) and specificity (in cyan) as a function of the depth of coverage threshold employed to filter the experimental data ( 30 ). The number of true positives (TP), true negatives (TN), false positives (FP) and false negatives (FN) are the same as in A. Legend is displayed below the plot curves.
    Synthetic Bsteii Xmai Dna Fragment, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 88/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/synthetic bsteii xmai dna fragment/product/Thermo Fisher
    Average 88 stars, based on 6 article reviews
    Price from $9.99 to $1999.99
    synthetic bsteii xmai dna fragment - by Bioz Stars, 2020-07
    88/100 stars
      Buy from Supplier

    99
    Thermo Fisher ecori xmai fragment
    Experimental validation of cuRRBS. ( A ) Barplots showing the number of true positives (TP, in green), true negatives (TN, in blue), false positives (FP, in red) and false negatives (FN, in orange) when comparing cuRRBS theoretical prediction with the actual <t>XmaI-RRBS</t> experimental data ( 30 ). The number of sites in each category is calculated for different thresholds in the depth of coverage (number of reads covering a CpG site as reported by Bismark). cuRRBS prediction for the CpG sites in human CpG islands was obtained enforcing a theoretical size range of 90–185 bp and running the software for XmaI with all the default parameters (with a read length of 200 bp). Legend is displayed on the right hand side. ( B ) Plot showing values of cuRRBS sensitivity (in light green) and specificity (in cyan) as a function of the depth of coverage threshold employed to filter the experimental data ( 30 ). The number of true positives (TP), true negatives (TN), false positives (FP) and false negatives (FN) are the same as in A. Legend is displayed below the plot curves.
    Ecori Xmai Fragment, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 99/100, based on 13 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ecori xmai fragment/product/Thermo Fisher
    Average 99 stars, based on 13 article reviews
    Price from $9.99 to $1999.99
    ecori xmai fragment - by Bioz Stars, 2020-07
    99/100 stars
      Buy from Supplier

    99
    Thermo Fisher synthetic cap cdna xmai egfp bamhi sequence
    Experimental validation of cuRRBS. ( A ) Barplots showing the number of true positives (TP, in green), true negatives (TN, in blue), false positives (FP, in red) and false negatives (FN, in orange) when comparing cuRRBS theoretical prediction with the actual <t>XmaI-RRBS</t> experimental data ( 30 ). The number of sites in each category is calculated for different thresholds in the depth of coverage (number of reads covering a CpG site as reported by Bismark). cuRRBS prediction for the CpG sites in human CpG islands was obtained enforcing a theoretical size range of 90–185 bp and running the software for XmaI with all the default parameters (with a read length of 200 bp). Legend is displayed on the right hand side. ( B ) Plot showing values of cuRRBS sensitivity (in light green) and specificity (in cyan) as a function of the depth of coverage threshold employed to filter the experimental data ( 30 ). The number of true positives (TP), true negatives (TN), false positives (FP) and false negatives (FN) are the same as in A. Legend is displayed below the plot curves.
    Synthetic Cap Cdna Xmai Egfp Bamhi Sequence, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 99/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/synthetic cap cdna xmai egfp bamhi sequence/product/Thermo Fisher
    Average 99 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    synthetic cap cdna xmai egfp bamhi sequence - by Bioz Stars, 2020-07
    99/100 stars
      Buy from Supplier

    Image Search Results


    Dendrogram showing the genetic relationship of 50 macrolide-resistant Streptococcus pyogenes established from PFGE patterns obtained after Sma I and Cfr 9I digestion and their antibiotic resistance gene content. The dendrogram, to the left, compares the percent of genetic relatedness among resistant isolates. The level at which the vertical line transects the horizontal line from the PFGE of each isolate determines its similarity based on the percent scale above the dendrogram. PFGE clusters were defined as isolates sharing at least 80% similarity. Each major lineage is designated by a capital letter. PFGE, pulsed-field gel electrophoresis.

    Journal: Microbial Drug Resistance

    Article Title: Changes in Macrolide Resistance Among Group A Streptococci in Serbia and Clonal Evolution of Resistant Isolates

    doi: 10.1089/mdr.2017.0306

    Figure Lengend Snippet: Dendrogram showing the genetic relationship of 50 macrolide-resistant Streptococcus pyogenes established from PFGE patterns obtained after Sma I and Cfr 9I digestion and their antibiotic resistance gene content. The dendrogram, to the left, compares the percent of genetic relatedness among resistant isolates. The level at which the vertical line transects the horizontal line from the PFGE of each isolate determines its similarity based on the percent scale above the dendrogram. PFGE clusters were defined as isolates sharing at least 80% similarity. Each major lineage is designated by a capital letter. PFGE, pulsed-field gel electrophoresis.

    Article Snippet: Briefly, chromosomal DNAs of MRGAS isolates expressing the MLS phenotype were digested with the Sma I (10 U) restriction enzyme (Thermo Scientific), (run time: 18 hr, switching intervals: 5–35 sec, angle: 120°, voltage: 6 V, and cooling temperature: 14°C), while DNAs of strains with an M phenotype were treated with the Cfr 9I (30 U) restriction enzyme (Thermo Scientific), (run time: 18 hr, switching intervals: 5–35 sec, angle: 120°, voltage: 6 V, and cooling temperature: 14°C).

    Techniques: Pulsed-Field Gel, Electrophoresis

    Dendrogram of Cfr9I macrorestriction PFGE profiles of representative MRSA isolates recovered from pigs on the farm, at lairage, from carcass swabs and retail pork samples, and association with sources (farms 1 to 10), sample type (nasal, perianal, carcass

    Journal: Journal of Clinical Microbiology

    Article Title: Epidemiology and Genotypic Characteristics of Methicillin-Resistant Staphylococcus aureus Strains of Porcine Origin

    doi: 10.1128/JCM.01971-12

    Figure Lengend Snippet: Dendrogram of Cfr9I macrorestriction PFGE profiles of representative MRSA isolates recovered from pigs on the farm, at lairage, from carcass swabs and retail pork samples, and association with sources (farms 1 to 10), sample type (nasal, perianal, carcass

    Article Snippet: Slices of the plugs were digested with 40 U of Cfr9I restriction enzyme (Fermentas Inc., Glen Burnie, MD) overnight at 37°C.

    Techniques:

    Pulse-field gel electrophoresis following Cfr9I digestion. M: lambda DNA marker, Type “A”: Pulse-field gel type A, Type “B”: Pulse-field gel type B.

    Journal: PLoS ONE

    Article Title: Prevalence and characteristics of Livestock-Associated Methicillin-Resistant Staphylococcus aureus (LA-MRSA) isolated from chicken meat in the province of Quebec, Canada

    doi: 10.1371/journal.pone.0227183

    Figure Lengend Snippet: Pulse-field gel electrophoresis following Cfr9I digestion. M: lambda DNA marker, Type “A”: Pulse-field gel type A, Type “B”: Pulse-field gel type B.

    Article Snippet: PFGE typing of isolates PFGE of total DNA was performed using of SmaI and Cfr9I restriction enzymes (Fermentas Life Sciences, Burlington, ON, Canada) using the protocol of Mulvey et al [ ].

    Techniques: Nucleic Acid Electrophoresis, Lambda DNA Preparation, Marker

    Experimental validation of cuRRBS. ( A ) Barplots showing the number of true positives (TP, in green), true negatives (TN, in blue), false positives (FP, in red) and false negatives (FN, in orange) when comparing cuRRBS theoretical prediction with the actual XmaI-RRBS experimental data ( 30 ). The number of sites in each category is calculated for different thresholds in the depth of coverage (number of reads covering a CpG site as reported by Bismark). cuRRBS prediction for the CpG sites in human CpG islands was obtained enforcing a theoretical size range of 90–185 bp and running the software for XmaI with all the default parameters (with a read length of 200 bp). Legend is displayed on the right hand side. ( B ) Plot showing values of cuRRBS sensitivity (in light green) and specificity (in cyan) as a function of the depth of coverage threshold employed to filter the experimental data ( 30 ). The number of true positives (TP), true negatives (TN), false positives (FP) and false negatives (FN) are the same as in A. Legend is displayed below the plot curves.

    Journal: Nucleic Acids Research

    Article Title: cuRRBS: simple and robust evaluation of enzyme combinations for reduced representation approaches

    doi: 10.1093/nar/gkx814

    Figure Lengend Snippet: Experimental validation of cuRRBS. ( A ) Barplots showing the number of true positives (TP, in green), true negatives (TN, in blue), false positives (FP, in red) and false negatives (FN, in orange) when comparing cuRRBS theoretical prediction with the actual XmaI-RRBS experimental data ( 30 ). The number of sites in each category is calculated for different thresholds in the depth of coverage (number of reads covering a CpG site as reported by Bismark). cuRRBS prediction for the CpG sites in human CpG islands was obtained enforcing a theoretical size range of 90–185 bp and running the software for XmaI with all the default parameters (with a read length of 200 bp). Legend is displayed on the right hand side. ( B ) Plot showing values of cuRRBS sensitivity (in light green) and specificity (in cyan) as a function of the depth of coverage threshold employed to filter the experimental data ( 30 ). The number of true positives (TP), true negatives (TN), false positives (FP) and false negatives (FN) are the same as in A. Legend is displayed below the plot curves.

    Article Snippet: Mapping of RRBS samples XmaI-RRBS data generated on the Ion Torrent platform ( ) and MspI & Taqα I-RRBS data generated on the Illumina HiSeq platform ( ) were quality-trimmed using Trim Galore ( www.bioinformatics.babraham.ac.uk/projects/trim_galore/ ) and had base pairs removed from the 3′ end to avoid including filled-in nucleotides with artificial methylation states (the filled-in XmaI, MspI and Taqα I cut sites include the nucleotide sequence CCGG, CG and CG respectively).

    Techniques: Software