v3-v4 region Search Results


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  • 99
    New England Biolabs v3 v4 region
    V3 V4 Region, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 69 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc v3 v4 region
    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    V3 V4 Region, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 92/100, based on 71 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    Hypervariable V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 35 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    Variable V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 12 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    16s V3 V4 Region, supplied by TaKaRa, used in various techniques. Bioz Stars score: 91/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc v3 v4 region primers
    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    V3 V4 Region Primers, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    16s Rrna V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 41 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    Miseq Platform Covering V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    Rrna Gene V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    16s Rdna V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 16 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    16s Rrna V3 V4 Region, supplied by Oxford Nanopore, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    16s Rrna Gene V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 31 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    Bacterial 16s Rrna Gene V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    16s Rrna Gene V3 V4 Region Amplification, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the <t>v3-v4</t> region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.
    Bacterial 16s Ribosomal Rna V3 V4 Region, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Rarefaction analysis of the <t>V3/V4</t> MiSeq sequencing reads of the <t>16S</t> <t>rRNA</t> gene from the nine corrosion samples at a 97% sequence similarity cutoff value.
    16s Rrna Gene V3 V4 Region Sequencing, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Rarefaction analysis of the <t>V3/V4</t> MiSeq sequencing reads of the <t>16S</t> <t>rRNA</t> gene from the nine corrosion samples at a 97% sequence similarity cutoff value.
    Rrna Gene V3 V4 Region Illumina Sequencing, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Thermo Fisher bacterium 16s rrna gene v3 v4 region amplification
    Rarefaction analysis of the <t>V3/V4</t> MiSeq sequencing reads of the <t>16S</t> <t>rRNA</t> gene from the nine corrosion samples at a 97% sequence similarity cutoff value.
    Bacterium 16s Rrna Gene V3 V4 Region Amplification, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 93/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the v3-v4 region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.

    Journal: Scientifica

    Article Title: Toxoplasma gondii-Induced Long-Term Changes in the Upper Intestinal Microflora during the Chronic Stage of Infection

    doi: 10.1155/2018/2308619

    Figure Lengend Snippet: Individual differences at the species level in chronic T. gondii -infected and healthy mice of the first cohort. CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the v3-v4 region. The graph shows (a) the log-transformed average of highly variable species in infected and control groups and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Highly variable species only appeared in the infected mice and the vast majority of them belonged to the Firmicutes phyla.

    Article Snippet: Individually indexed libraries were prepared targeting the v3-v4 region on the 16S rRNA gene using the standard Illumina 16S metagenomic library preparation guide.

    Techniques: Infection, Mouse Assay, Sequencing, Transformation Assay

    Individual differences at species level in acute T. gondii -infected and healthy mice of the first cohort. 5 CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 dpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the v3-v4 region. The graph shows (a) the log-transformed ratios of averaged standard deviation of the relative abundance of highly variable species in infected and control mice and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Lactobacillus, Proteus, and Bacteroidetes species are increasingly unstable in the acute infected mice, while Bacillaceae species appear unstable in the uninfected mice.

    Journal: Scientifica

    Article Title: Toxoplasma gondii-Induced Long-Term Changes in the Upper Intestinal Microflora during the Chronic Stage of Infection

    doi: 10.1155/2018/2308619

    Figure Lengend Snippet: Individual differences at species level in acute T. gondii -infected and healthy mice of the first cohort. 5 CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 5 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 dpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile small intestinal microbiome. Sequences were analyzed using QIIME pipeline focusing on the v3-v4 region. The graph shows (a) the log-transformed ratios of averaged standard deviation of the relative abundance of highly variable species in infected and control mice and (b) the percentage of highly variable species of the upper intestinal microflora in each mouse. Lactobacillus, Proteus, and Bacteroidetes species are increasingly unstable in the acute infected mice, while Bacillaceae species appear unstable in the uninfected mice.

    Article Snippet: Individually indexed libraries were prepared targeting the v3-v4 region on the 16S rRNA gene using the standard Illumina 16S metagenomic library preparation guide.

    Techniques: Infection, Mouse Assay, Sequencing, Transformation Assay, Standard Deviation

    Individual differences at phylum level in chronically T. gondii infected and healthy mice of the second cohort. 45 CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 17 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile the small intestinal microbiome. Sequences were analyzed using QIIME 2 pipeline focusing on the v3-v4 region. The graph shows enrichment of Bacteroidetes phylum in chronically infected mice.

    Journal: Scientifica

    Article Title: Toxoplasma gondii-Induced Long-Term Changes in the Upper Intestinal Microflora during the Chronic Stage of Infection

    doi: 10.1155/2018/2308619

    Figure Lengend Snippet: Individual differences at phylum level in chronically T. gondii infected and healthy mice of the second cohort. 45 CD1 mice were infected IP with 500 T. gondii tachyzoites (GT1) in PBS, along with 17 control CD1 mice by the IP route with PBS only. The group was sacrificed at 5 mpi. Whole 16S rDNA libraries were sequenced using the MiSeq Illumina sequencing platform to profile the small intestinal microbiome. Sequences were analyzed using QIIME 2 pipeline focusing on the v3-v4 region. The graph shows enrichment of Bacteroidetes phylum in chronically infected mice.

    Article Snippet: Individually indexed libraries were prepared targeting the v3-v4 region on the 16S rRNA gene using the standard Illumina 16S metagenomic library preparation guide.

    Techniques: Infection, Mouse Assay, Sequencing

    Rarefaction analysis of the V3/V4 MiSeq sequencing reads of the 16S rRNA gene from the nine corrosion samples at a 97% sequence similarity cutoff value.

    Journal: Frontiers in Microbiology

    Article Title: Analysis of Bacterial Community Composition of Corroded Steel Immersed in Sanya and Xiamen Seawaters in China via Method of Illumina MiSeq Sequencing

    doi: 10.3389/fmicb.2017.01737

    Figure Lengend Snippet: Rarefaction analysis of the V3/V4 MiSeq sequencing reads of the 16S rRNA gene from the nine corrosion samples at a 97% sequence similarity cutoff value.

    Article Snippet: We analyzed the bacterial communities on the samples by targeted 16S rRNA gene (V3–V4 region) sequencing using the Illumina MiSeq.

    Techniques: Sequencing