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  • 99
    New England Biolabs ultra directional rnaseq library preparation kit
    Ultra Directional Rnaseq Library Preparation Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 657 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ultra directional rnaseq library preparation kit/product/New England Biolabs
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    Illumina Inc rnaseq library construction
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Rnaseq Library Construction, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 230 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Molecular Biosciences Inc rnaseq library construction
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Rnaseq Library Construction, supplied by Molecular Biosciences Inc, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc construct strand specific rnaseq libraries
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Construct Strand Specific Rnaseq Libraries, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 86/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Solexa ultra high throughput sequencing uhts rnaseq library construction
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Ultra High Throughput Sequencing Uhts Rnaseq Library Construction, supplied by Solexa, used in various techniques. Bioz Stars score: 85/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Lucigen Corp fosmid library
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Fosmid Library, supplied by Lucigen Corp, used in various techniques. Bioz Stars score: 90/100, based on 21 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc truseq stranded messenger rna library prep kit
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Truseq Stranded Messenger Rna Library Prep Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc strand specific illumina rnaseq library
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Strand Specific Illumina Rnaseq Library, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 9 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc rnaseq analysis rnaseq libraries
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Rnaseq Analysis Rnaseq Libraries, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 12 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc mrnaseq library preparation kit
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Mrnaseq Library Preparation Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 85/100, based on 14 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc truseq library construction protocol
    Distribution of <t>RNA-Seq</t> Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized <t>RNAseq</t> reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.
    Truseq Library Construction Protocol, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Lucigen Corp as viral metagenomic library
    Relative dominance of bacterial divisions represented by sequences from the bacterial culture collection, 16S rRNA gene clone library, cultured bacteriophages, and viral <t>metagenomic</t> library. The percentages of sequences affiliated with each bacterial
    As Viral Metagenomic Library, supplied by Lucigen Corp, used in various techniques. Bioz Stars score: 85/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    New England Biolabs ultra rna library prep kit
    Relative dominance of bacterial divisions represented by sequences from the bacterial culture collection, 16S rRNA gene clone library, cultured bacteriophages, and viral <t>metagenomic</t> library. The percentages of sequences affiliated with each bacterial
    Ultra Rna Library Prep Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 7844 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc truseq rna sample prep kit
    Relative dominance of bacterial divisions represented by sequences from the bacterial culture collection, 16S rRNA gene clone library, cultured bacteriophages, and viral <t>metagenomic</t> library. The percentages of sequences affiliated with each bacterial
    Truseq Rna Sample Prep Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 5059 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Distribution of RNA-Seq Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized RNAseq reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.

    Journal: PLoS ONE

    Article Title: Methylation Affects Transposition and Splicing of a Large CACTA Transposon from a MYB Transcription Factor Regulating Anthocyanin Synthase Genes in Soybean Seed Coats

    doi: 10.1371/journal.pone.0111959

    Figure Lengend Snippet: Distribution of RNA-Seq Reads from Seed Coats of the RM30- R * and RM38- r When Aligned to the Transcript Sequence of Glyma09g36983. The pair of graphs in each row represent the distribution of non-normalized RNAseq reads that align to the 714 bp transcript sequence from the Glyma09g36983 gene at each of the five stages of seed coat development indicated in the margin to the right (described in Figure 4 ). The plots in the left column represent the distributions of sequence reads derived from the seed coats of the RM30- R * that is interrupted by the TgmR* transposon and the plots in the right column represent the RNAseq reads derived from the RM38- r line with the uninterrupted R gene but containing the “C”-nt deletion at 222 bp of the transcript. The numbers of RNAseq reads matching a given position of the R gene transcript are plotted against the position along the reference Glyma09g36983 transcript sequence containing the three exons and no introns. No expression was detected in the early 100–200 mg seed developmental stage in the RM30-R* line. The red arrow points to the location of the r allele “C”-nt deletion at 222 bp of the transcript.

    Article Snippet: Starting with 1 µg total RNA per sample, RNAseq libraries were constructed with the TruSeq RNA Sample Preparation Kit (Illumina San Diego, CA).

    Techniques: RNA Sequencing Assay, Sequencing, Derivative Assay, Expressing

    Relative dominance of bacterial divisions represented by sequences from the bacterial culture collection, 16S rRNA gene clone library, cultured bacteriophages, and viral metagenomic library. The percentages of sequences affiliated with each bacterial

    Journal: Applied and Environmental Microbiology

    Article Title: Census of the Viral Metagenome within an Activated Sludge Microbial Assemblage ▿

    doi: 10.1128/AEM.02520-09

    Figure Lengend Snippet: Relative dominance of bacterial divisions represented by sequences from the bacterial culture collection, 16S rRNA gene clone library, cultured bacteriophages, and viral metagenomic library. The percentages of sequences affiliated with each bacterial

    Article Snippet: An AS viral metagenomic library was constructed at the Lucigen Corporation (Middleton, WI) using a linker-amplified shotgun library approach ( , ), and 1,161 cloned insert DNA sequences were determined using a single-vector primer.

    Techniques: Cell Culture

    Taxonomic breakdown of the significant hits from the AS viral metagenomic libraries based on a BLASTx comparison against the GenBank nr/nt and env databases. Numbers indicate the number of sequences assigned to a particular phylogenetic category based

    Journal: Applied and Environmental Microbiology

    Article Title: Census of the Viral Metagenome within an Activated Sludge Microbial Assemblage ▿

    doi: 10.1128/AEM.02520-09

    Figure Lengend Snippet: Taxonomic breakdown of the significant hits from the AS viral metagenomic libraries based on a BLASTx comparison against the GenBank nr/nt and env databases. Numbers indicate the number of sequences assigned to a particular phylogenetic category based

    Article Snippet: An AS viral metagenomic library was constructed at the Lucigen Corporation (Middleton, WI) using a linker-amplified shotgun library approach ( , ), and 1,161 cloned insert DNA sequences were determined using a single-vector primer.

    Techniques:

    Predicted metabolic profiles obtained from SEED analyses of viral metagenomic open reading frames (ORFs).

    Journal: Applied and Environmental Microbiology

    Article Title: Census of the Viral Metagenome within an Activated Sludge Microbial Assemblage ▿

    doi: 10.1128/AEM.02520-09

    Figure Lengend Snippet: Predicted metabolic profiles obtained from SEED analyses of viral metagenomic open reading frames (ORFs).

    Article Snippet: An AS viral metagenomic library was constructed at the Lucigen Corporation (Middleton, WI) using a linker-amplified shotgun library approach ( , ), and 1,161 cloned insert DNA sequences were determined using a single-vector primer.

    Techniques: