Journal: The Journal of pediatrics

Article Title: Computational Gene Expression Modeling Identifies Salivary Biomarker Analysis that Predict Oral Feeding Readiness in the Newborn

doi: 10.1016/j.jpeds.2014.10.065

Figure Lengend Snippet: Pertinent information regarding the genes included on the RT-qPCR platform.

Article Snippet: Pertinent information regarding all genes on the platform is listed in (available at www.jpeds.com ). table ft1 table-wrap mode="anchored" t5 Table 1 caption a7 System Gene Function Life Technologies ID Spans Exons Contains SNPs Amplicon Length Hypothalamic Regulation of Feeding Behavior NPY2R Feeding behavior Hs01921296 No No 143 AMPK Feeding behavior, energy expenditure Hs01562308 Yes No 93 TCF7L2 Feeding behavior Hs01009044 Yes No 89 Sensory Integration PLXNA1 Olfactory system development Hs00413698 Yes No 53 OR5AK4P Olfactory system development Hs03454034 Yes No 119 GNAS Sensory perception of smell Hs00255603 Yes No 59 POU2F1 Olfactory placode formation Hs00231250 Yes No 80 NPHP4 Visual behavior Hs00296416 Yes 67 KCNJ10 Visual perception Hs01922935 No No 101 Neurodevelopment NRP1 Axon guidance Hs00826128 Yes No 90 NNAT Brain development Hs00193590 Yes No 72 NPAS3 Social development Hs00223201 Yes No 88 IL1RAPL2 Central nervous system development Hs00213600 Yes No 90 ONECUT2 Peripheral nervous system development Hs00191477 No No 57 NKX6-3 Central nervous system development Hs00332012 Yes No 113 Facial Development WNT3 Cell fate and patterning Hs00229135 Yes No 69 RUNX1 Skeletal development Hs00231079 Yes No 64 MAP2K Pharyngeal development Hs00983247 Yes No 68 TSHZ3 Embryonic development Hs02379784 No No 115 Gastrointestinal Development ABCB1 Hydrolase activity Hs00184491 Yes No 110 INSR Utilization and uptake of glucose Hs00961554 Yes No 68 Controls GAPDH Reference Gene Hs99999905 Yes Yes 124 YWHAZ Reference Gene Hs03044281 Yes No 106 ACTB Reference Gene Hs01060665 Yes No 63 Open in a separate window Pertinent information regarding the genes included on the RT-qPCR platform.

Techniques: Amplification, Activity Assay

Journal: The Journal of pediatrics

Article Title: Computational Gene Expression Modeling Identifies Salivary Biomarker Analysis that Predict Oral Feeding Readiness in the Newborn

doi: 10.1016/j.jpeds.2014.10.065

Figure Lengend Snippet: Unadjusted comparisons of feeding status between sample subgroups

Article Snippet: Pertinent information regarding all genes on the platform is listed in (available at www.jpeds.com ). table ft1 table-wrap mode="anchored" t5 Table 1 caption a7 System Gene Function Life Technologies ID Spans Exons Contains SNPs Amplicon Length Hypothalamic Regulation of Feeding Behavior NPY2R Feeding behavior Hs01921296 No No 143 AMPK Feeding behavior, energy expenditure Hs01562308 Yes No 93 TCF7L2 Feeding behavior Hs01009044 Yes No 89 Sensory Integration PLXNA1 Olfactory system development Hs00413698 Yes No 53 OR5AK4P Olfactory system development Hs03454034 Yes No 119 GNAS Sensory perception of smell Hs00255603 Yes No 59 POU2F1 Olfactory placode formation Hs00231250 Yes No 80 NPHP4 Visual behavior Hs00296416 Yes 67 KCNJ10 Visual perception Hs01922935 No No 101 Neurodevelopment NRP1 Axon guidance Hs00826128 Yes No 90 NNAT Brain development Hs00193590 Yes No 72 NPAS3 Social development Hs00223201 Yes No 88 IL1RAPL2 Central nervous system development Hs00213600 Yes No 90 ONECUT2 Peripheral nervous system development Hs00191477 No No 57 NKX6-3 Central nervous system development Hs00332012 Yes No 113 Facial Development WNT3 Cell fate and patterning Hs00229135 Yes No 69 RUNX1 Skeletal development Hs00231079 Yes No 64 MAP2K Pharyngeal development Hs00983247 Yes No 68 TSHZ3 Embryonic development Hs02379784 No No 115 Gastrointestinal Development ABCB1 Hydrolase activity Hs00184491 Yes No 110 INSR Utilization and uptake of glucose Hs00961554 Yes No 68 Controls GAPDH Reference Gene Hs99999905 Yes Yes 124 YWHAZ Reference Gene Hs03044281 Yes No 106 ACTB Reference Gene Hs01060665 Yes No 63 Open in a separate window Pertinent information regarding the genes included on the RT-qPCR platform.

Techniques: Expressing

Journal: Pediatric surgery international

Article Title: Lower NPAS3 expression during the later stages of abnormal lung development in rat congenital diaphragmatic hernia.

doi: 10.1007/s00383-015-3703-2

Figure Lengend Snippet: Fig. 1 NPAS3 expression in normal and nitrofen-induced hypoplastic lungs during fetal rat lung development. NPAS3 is present throughout all stages of lung development from early E15 until late E21. a E15. b E18. c E21. d Immunohistochemistry negative control—omission of the primary antibody

Article Snippet: NPAS3 was detected with an NPAS3 antibody (ProSci incorporated) using a 1:1000 dilution and a horseradish peroxidase-conjugated goat-anti-rabbit secondary antibody (Bio-Rad) in a 1:5000 dilution.

Techniques: Expressing, Immunohistochemistry, Negative Control

Journal: Pediatric surgery international

Article Title: Lower NPAS3 expression during the later stages of abnormal lung development in rat congenital diaphragmatic hernia.

doi: 10.1007/s00383-015-3703-2

Figure Lengend Snippet: Fig. 1 NPAS3 expression in normal and nitrofen-induced hypoplastic lungs during fetal rat lung development. NPAS3 is present throughout all stages of lung development from early E15 until late E21. a E15. b E18. c E21. d Immunohistochemistry negative control—omission of the primary antibody

Article Snippet: Sections were incubated with the antibody for NPAS3 (ProSci incorporated, 4109) overnight at 4 C (1:1000 dilution) as previously described [20].

Techniques: Expressing, Immunohistochemistry, Negative Control