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  • 94
    Illumina Inc illumina gaiix platform
    DG template preparation workflow. Genomic DNA is digested with Fse I. Index adapters are ligated to the Fse I ends. The DNA fragments are randomly sheared, followed by size selection on agarose gels. DNA fragments of a selected size are end-repaired. A T-tailed adapter is ligated to the repaired ends of the DNA. PCR is carried out with a biotinylated oligonucleotide primer complementary to the Index adapter. DNA fragments labelled with biotin are captured via magnetic beads. The purified DNA fragments are amplified by PCR with <t>Illumina</t> Primers. Amplification products are sequenced on the Illumina <t>GAIIx</t> sequencer. The colored regions in the DNA fragments correspond to the colored regions in the detailed views of the Index and T-tailed adapters in Figure 6 .
    Illumina Gaiix Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 3240 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina gaiix platform/product/Illumina Inc
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    88
    Illumina Inc unmodified illumina genome analyzer iix gaiix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Unmodified Illumina Genome Analyzer Iix Gaiix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 216 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/unmodified illumina genome analyzer iix gaiix/product/Illumina Inc
    Average 88 stars, based on 216 article reviews
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    unmodified illumina genome analyzer iix gaiix - by Bioz Stars, 2020-05
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    85
    Illumina Inc single illumina genome analyzer iix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Single Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 85/100, based on 11 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/single illumina genome analyzer iix/product/Illumina Inc
    Average 85 stars, based on 11 article reviews
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    single illumina genome analyzer iix - by Bioz Stars, 2020-05
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    85
    Thermo Fisher illumina s genome analyzer iix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Illumina S Genome Analyzer Iix, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 85/100, based on 15 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    93
    Illumina Inc gpl10999 illumina genome analyzer iix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Gpl10999 Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/gpl10999 illumina genome analyzer iix/product/Illumina Inc
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    93
    Illumina Inc short read illumina genome analyzer iix gaiix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Short Read Illumina Genome Analyzer Iix Gaiix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/short read illumina genome analyzer iix gaiix/product/Illumina Inc
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    85
    Illumina Inc motif analyses illumina genome analyzer iix fastq files
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Motif Analyses Illumina Genome Analyzer Iix Fastq Files, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 85/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/motif analyses illumina genome analyzer iix fastq files/product/Illumina Inc
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    85
    Illumina Inc genome analyzer iix gaiix illumina sequencing platform
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Genome Analyzer Iix Gaiix Illumina Sequencing Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 85/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix gaiix illumina sequencing platform/product/Illumina Inc
    Average 85 stars, based on 2 article reviews
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    93
    Illumina Inc gpl13779 illumina genome analyzer iix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Gpl13779 Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/gpl13779 illumina genome analyzer iix/product/Illumina Inc
    Average 93 stars, based on 3 article reviews
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    85
    Solexa in house illumina solexa genome analyzer iix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    In House Illumina Solexa Genome Analyzer Iix, supplied by Solexa, used in various techniques. Bioz Stars score: 85/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/in house illumina solexa genome analyzer iix/product/Solexa
    Average 85 stars, based on 5 article reviews
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    in house illumina solexa genome analyzer iix - by Bioz Stars, 2020-05
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    87
    Illumina Inc adaptor clipped illumina genome analyser iix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Adaptor Clipped Illumina Genome Analyser Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 87/100, based on 21 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/adaptor clipped illumina genome analyser iix/product/Illumina Inc
    Average 87 stars, based on 21 article reviews
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    88
    Illumina Inc paired end illumina gaiix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Paired End Illumina Gaiix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 12 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/paired end illumina gaiix/product/Illumina Inc
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    paired end illumina gaiix - by Bioz Stars, 2020-05
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    88
    Illumina Inc gaiix instrument follow illumina genome analyzer iix user guide
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Gaiix Instrument Follow Illumina Genome Analyzer Iix User Guide, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/gaiix instrument follow illumina genome analyzer iix user guide/product/Illumina Inc
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    88
    Illumina Inc 76 bp illumina genome analyzer iix reads
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    76 Bp Illumina Genome Analyzer Iix Reads, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/76 bp illumina genome analyzer iix reads/product/Illumina Inc
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    76 bp illumina genome analyzer iix reads - by Bioz Stars, 2020-05
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    92
    Illumina Inc genome analyser illumina iix
    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, <t>Illumina</t> <t>GAIIx,</t> and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.
    Genome Analyser Illumina Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 14 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyser illumina iix/product/Illumina Inc
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    Image Search Results


    DG template preparation workflow. Genomic DNA is digested with Fse I. Index adapters are ligated to the Fse I ends. The DNA fragments are randomly sheared, followed by size selection on agarose gels. DNA fragments of a selected size are end-repaired. A T-tailed adapter is ligated to the repaired ends of the DNA. PCR is carried out with a biotinylated oligonucleotide primer complementary to the Index adapter. DNA fragments labelled with biotin are captured via magnetic beads. The purified DNA fragments are amplified by PCR with Illumina Primers. Amplification products are sequenced on the Illumina GAIIx sequencer. The colored regions in the DNA fragments correspond to the colored regions in the detailed views of the Index and T-tailed adapters in Figure 6 .

    Journal: BMC Genomics

    Article Title: Digital genotyping of sorghum - a diverse plant species with a large repeat-rich genome

    doi: 10.1186/1471-2164-14-448

    Figure Lengend Snippet: DG template preparation workflow. Genomic DNA is digested with Fse I. Index adapters are ligated to the Fse I ends. The DNA fragments are randomly sheared, followed by size selection on agarose gels. DNA fragments of a selected size are end-repaired. A T-tailed adapter is ligated to the repaired ends of the DNA. PCR is carried out with a biotinylated oligonucleotide primer complementary to the Index adapter. DNA fragments labelled with biotin are captured via magnetic beads. The purified DNA fragments are amplified by PCR with Illumina Primers. Amplification products are sequenced on the Illumina GAIIx sequencer. The colored regions in the DNA fragments correspond to the colored regions in the detailed views of the Index and T-tailed adapters in Figure 6 .

    Article Snippet: After sequencing on the Illumina GAIIx platform, the raw sequencing reads are processed and deconvoluted into individual groups by barcode.

    Techniques: Selection, Polymerase Chain Reaction, Magnetic Beads, Purification, Amplification

    The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, Illumina GAIIx, and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.

    Journal: BMC Systems Biology

    Article Title: Optimizing hybrid assembly of next-generation sequence data from Enterococcus faecium: a microbe with highly divergent genome

    doi: 10.1186/1752-0509-6-S3-S21

    Figure Lengend Snippet: The performance of assembly as increasing coverage depths . The performance of assembled contigs (A), N50 size (B) and total bases (C) for the three NGS technologies at increasing depths in simulation. The red line, green line and blue line show the performance of Roche 454, Illumina GAIIx, and ABI SOLiD platform, respectively. Reads from each platform were simulated by random subsampling. Summary of performance of each platform, 25×, 240× and 300× sequencing data generating from 454, GAIIx and SOLiD platforms was sufficient for de novo assembly.

    Article Snippet: If cost allowed, the optimal outcome can be achieved with the combinations of 454 GS-FLX, Illumina GAIIx, and SOLiD4 sequencing data at abovementioned coverage depths.

    Techniques: Next-Generation Sequencing, Sequencing