hiseq2500 Illumina Inc Search Results


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  • 92
    Illumina Inc illumina hiseq2500 instrument
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Illumina Hiseq2500 Instrument, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 2044 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina hiseq2500 instrument/product/Illumina Inc
    Average 92 stars, based on 2044 article reviews
    Price from $9.99 to $1999.99
    illumina hiseq2500 instrument - by Bioz Stars, 2020-08
    92/100 stars
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    84
    Illumina Inc hiseq2500 genome analyser
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Hiseq2500 Genome Analyser, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 84/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2500 genome analyser/product/Illumina Inc
    Average 84 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    hiseq2500 genome analyser - by Bioz Stars, 2020-08
    84/100 stars
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    92
    Illumina Inc hiseq2500 se50 platform
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Hiseq2500 Se50 Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2500 se50 platform/product/Illumina Inc
    Average 92 stars, based on 8 article reviews
    Price from $9.99 to $1999.99
    hiseq2500 se50 platform - by Bioz Stars, 2020-08
    92/100 stars
      Buy from Supplier

    91
    Illumina Inc illumina hiseq2000 hiseq2500 platforms
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Illumina Hiseq2000 Hiseq2500 Platforms, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina hiseq2000 hiseq2500 platforms/product/Illumina Inc
    Average 91 stars, based on 6 article reviews
    Price from $9.99 to $1999.99
    illumina hiseq2000 hiseq2500 platforms - by Bioz Stars, 2020-08
    91/100 stars
      Buy from Supplier

    90
    Illumina Inc hiseq2000 hiseq2500 genome analysers
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Hiseq2000 Hiseq2500 Genome Analysers, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2000 hiseq2500 genome analysers/product/Illumina Inc
    Average 90 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    hiseq2000 hiseq2500 genome analysers - by Bioz Stars, 2020-08
    90/100 stars
      Buy from Supplier

    91
    Illumina Inc hiseq2500 pe250 platform
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Hiseq2500 Pe250 Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 88 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2500 pe250 platform/product/Illumina Inc
    Average 91 stars, based on 88 article reviews
    Price from $9.99 to $1999.99
    hiseq2500 pe250 platform - by Bioz Stars, 2020-08
    91/100 stars
      Buy from Supplier

    93
    Macrogen illumina hiseq2500 platform
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Illumina Hiseq2500 Platform, supplied by Macrogen, used in various techniques. Bioz Stars score: 93/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina hiseq2500 platform/product/Macrogen
    Average 93 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    illumina hiseq2500 platform - by Bioz Stars, 2020-08
    93/100 stars
      Buy from Supplier

    91
    Illumina Inc hiseq2500 apparatus
    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina <t>HiSeq2500</t> sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.
    Hiseq2500 Apparatus, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2500 apparatus/product/Illumina Inc
    Average 91 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    hiseq2500 apparatus - by Bioz Stars, 2020-08
    91/100 stars
      Buy from Supplier

    91
    Illumina Inc hiseq2500 sequencer
    Quality assessment and control of sequencing data from <t>HiSeq2500.</t> A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).
    Hiseq2500 Sequencer, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 669 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2500 sequencer/product/Illumina Inc
    Average 91 stars, based on 669 article reviews
    Price from $9.99 to $1999.99
    hiseq2500 sequencer - by Bioz Stars, 2020-08
    91/100 stars
      Buy from Supplier

    93
    Illumina Inc hiseq2500 rapid sequencing
    Quality assessment and control of sequencing data from <t>HiSeq2500.</t> A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).
    Hiseq2500 Rapid Sequencing, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2500 rapid sequencing/product/Illumina Inc
    Average 93 stars, based on 6 article reviews
    Price from $9.99 to $1999.99
    hiseq2500 rapid sequencing - by Bioz Stars, 2020-08
    93/100 stars
      Buy from Supplier

    93
    Illumina Inc hiseq2500 pe250
    Quality assessment and control of sequencing data from <t>HiSeq2500.</t> A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).
    Hiseq2500 Pe250, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 51 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq2500 pe250/product/Illumina Inc
    Average 93 stars, based on 51 article reviews
    Price from $9.99 to $1999.99
    hiseq2500 pe250 - by Bioz Stars, 2020-08
    93/100 stars
      Buy from Supplier

    93
    Illumina Inc illumina hiseq2000 hiseq2500 machine
    Quality assessment and control of sequencing data from <t>HiSeq2500.</t> A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).
    Illumina Hiseq2000 Hiseq2500 Machine, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina hiseq2000 hiseq2500 machine/product/Illumina Inc
    Average 93 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    illumina hiseq2000 hiseq2500 machine - by Bioz Stars, 2020-08
    93/100 stars
      Buy from Supplier

    Image Search Results


    Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina HiSeq2500 sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.

    Journal: Nature Communications

    Article Title: Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells

    doi: 10.1038/ncomms16027

    Figure Lengend Snippet: Experimental design and Oxford Nanopore sequencing read characteristics. ( a ) Schematic of experimental design. FACS-sorted single B1a cells were lysed. PolyA-RNA was then reverse transcribed and PCR amplified using template switching. Full-length cDNA was split into two reactions. Half of the reaction was tagmented by Tn5 and sequenced using a Illumina HiSeq2500 sequencer. The other half of the reaction was ligated to ONT adaptors and sequenced on an ONT MinION sequencer. ( b ) Schematic of the Mandalorion pipeline used to analyse the ONT 2D read data.

    Article Snippet: Sequencing the fragmented cDNA of the seven cells on the HiSeq2500, we generated between 73,086 and 351,876 150 bp Illumina reads per cell.

    Techniques: Nanopore Sequencing, FACS, Polymerase Chain Reaction, Amplification

    Quality assessment and control of sequencing data from HiSeq2500. A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).

    Journal: PLoS ONE

    Article Title: Reduction of Systematic Bias in Transcriptome Data from Human Peripheral Blood Mononuclear Cells for Transportation and Biobanking

    doi: 10.1371/journal.pone.0104283

    Figure Lengend Snippet: Quality assessment and control of sequencing data from HiSeq2500. A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).

    Article Snippet: The pooled libraries were then loaded into two flow cells for cluster generation using a TruSeq PE Cluster Kit v3-cBot-HS (Illumina) and sequenced on a HiSeq2500 system (Illumina) using a TruSeq SBS Kit v3-HS (200 cycles; Illumina), generating 2×101 bp reads.

    Techniques: Sequencing

    —Data analysis overview. DNA and RNA were isolated from A. viridis adult polyps sampled from a natural seawater pH gradient (at normal seawater pH 8.2, and at low seawater pH 7.9 and 7.6) off Vulcano Island, Sicily—Italy. Only one polyp (pH 8.2) was used for DNA extraction and was subjected to paired-end sequencing on the Illumina HiSeq2500 platform. Sequencing reads were assembled into a draft genome reference. Subsequently, repeat-enriched regions, including transposable elements were identified and annotated in this assembly. Nine polyps were used for small RNA library preparation and sequencing on the SOLiD 5500xl platform. Sequencing reads were further used for novel miRNA discovery and description of putative piRNA reads.

    Journal: Genome Biology and Evolution

    Article Title: Elucidating the Small Regulatory RNA Repertoire of the Sea Anemone Anemonia viridis Based on Whole Genome and Small RNA Sequencing

    doi: 10.1093/gbe/evy003

    Figure Lengend Snippet: —Data analysis overview. DNA and RNA were isolated from A. viridis adult polyps sampled from a natural seawater pH gradient (at normal seawater pH 8.2, and at low seawater pH 7.9 and 7.6) off Vulcano Island, Sicily—Italy. Only one polyp (pH 8.2) was used for DNA extraction and was subjected to paired-end sequencing on the Illumina HiSeq2500 platform. Sequencing reads were assembled into a draft genome reference. Subsequently, repeat-enriched regions, including transposable elements were identified and annotated in this assembly. Nine polyps were used for small RNA library preparation and sequencing on the SOLiD 5500xl platform. Sequencing reads were further used for novel miRNA discovery and description of putative piRNA reads.

    Article Snippet: Genome Reference Assembly and Search for Repeat-Enriched Regions Total DNA from a single A. viridis polyp (normal seawater conditions, pH 8.2) was extracted and subjected to whole genome sequencing on the Illumina HiSeq2500 platform ( ).

    Techniques: Isolation, DNA Extraction, Sequencing

    Overview of the reference transcriptome sequencing, and result of the Velvet/Oases assembly . A) RNA for the reference was pooled from all of the test samples. The Illumina HiSeq2000 platform was used to generate data for de novo assembly including large transcripts (LT) equivalent to 15,493 potential protein coding sequences. B) The accuracy and integrity of the assembly was assessed by BLAST comparison (100 bp overlap and ≥ 98% sequence identity) with the publicly available collection of sugar beet ESTs at the Sugar Beet Gene Index (SBGI), hosted at the Dana Farber Cancer Institute (DFCI).

    Journal: BMC Genomics

    Article Title: A new RNASeq-based reference transcriptome for sugar beet and its application in transcriptome-scale analysis of vernalization and gibberellin responses

    doi: 10.1186/1471-2164-13-99

    Figure Lengend Snippet: Overview of the reference transcriptome sequencing, and result of the Velvet/Oases assembly . A) RNA for the reference was pooled from all of the test samples. The Illumina HiSeq2000 platform was used to generate data for de novo assembly including large transcripts (LT) equivalent to 15,493 potential protein coding sequences. B) The accuracy and integrity of the assembly was assessed by BLAST comparison (100 bp overlap and ≥ 98% sequence identity) with the publicly available collection of sugar beet ESTs at the Sugar Beet Gene Index (SBGI), hosted at the Dana Farber Cancer Institute (DFCI).

    Article Snippet: Digital gene expression profiling and mapping to reference cDNA libraries generated from sub-samples of each test sample were sequenced (Illumina HiSeq2000, 50 bp single read module).

    Techniques: Sequencing

    Quality assessment and control of sequencing data from HiSeq2500. A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).

    Journal: PLoS ONE

    Article Title: Reduction of Systematic Bias in Transcriptome Data from Human Peripheral Blood Mononuclear Cells for Transportation and Biobanking

    doi: 10.1371/journal.pone.0104283

    Figure Lengend Snippet: Quality assessment and control of sequencing data from HiSeq2500. A. Quality values of sequence reads calculated by Cufflinks (Cuffdiff) in each sample. B. The blue bars show the number of sequence reads mapped to the human genome (hs37d5) with TopHat, and the red line with squares indicates the mapped percentage in each sample (B).

    Article Snippet: Subsequently, we performed whole transcriptome analysis using a HiSeq2500 sequencer (Illumina Inc., San Diego, CA, USA) to examine changes in gene expression under various sample conditions.

    Techniques: Sequencing