hiseq 2500 system Search Results


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  • 92
    GATC Biotech hiseq 2500 system
    Hiseq 2500 System, supplied by GATC Biotech, used in various techniques. Bioz Stars score: 92/100, based on 18 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/GATC Biotech
    Average 92 stars, based on 18 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
    92/100 stars
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    92
    Biomarker Technologies Co hiseq 2500 system
    Hiseq 2500 System, supplied by Biomarker Technologies Co, used in various techniques. Bioz Stars score: 92/100, based on 20 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Biomarker Technologies Co
    Average 92 stars, based on 20 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
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    94
    Macrogen hiseq 2500 system
    Hiseq 2500 System, supplied by Macrogen, used in various techniques. Bioz Stars score: 94/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Macrogen
    Average 94 stars, based on 8 article reviews
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    hiseq 2500 system - by Bioz Stars, 2020-07
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    92
    Bionova hiseq 2500 system
    Hiseq 2500 System, supplied by Bionova, used in various techniques. Bioz Stars score: 92/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Bionova
    Average 92 stars, based on 6 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
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    93
    Genewiz hiseq 2500 system
    Hiseq 2500 System, supplied by Genewiz, used in various techniques. Bioz Stars score: 93/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Genewiz
    Average 93 stars, based on 8 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
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    93
    Integragen hiseq 2500 system
    Hiseq 2500 System, supplied by Integragen, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Integragen
    Average 93 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
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    92
    Hokkaido System Science Co hiseq 2500 systems
    Hiseq 2500 Systems, supplied by Hokkaido System Science Co, used in various techniques. Bioz Stars score: 92/100, based on 12 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 systems/product/Hokkaido System Science Co
    Average 92 stars, based on 12 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 systems - by Bioz Stars, 2020-07
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    92
    Epigenomics hiseq 2500 system
    Hiseq 2500 System, supplied by Epigenomics, used in various techniques. Bioz Stars score: 92/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Epigenomics
    Average 92 stars, based on 2 article reviews
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    hiseq 2500 system - by Bioz Stars, 2020-07
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    93
    Novogene hiseq 2500 system
    Hiseq 2500 System, supplied by Novogene, used in various techniques. Bioz Stars score: 93/100, based on 16 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Novogene
    Average 93 stars, based on 16 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
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    99
    Illumina Inc hiseq 2500 system
    Box plots of read depths at concordant/discordant SNP loci among the NGSs and Omni 2.5-8. A) Box plots of the NGS read depth at the SNP loci showing concordance/discordance between the NGSs and Omni 2.5-8. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The graph on the left indicates the distribution of read depths at HiSeq2500 SNP loci and the graph on the right indicates the distribution of read depths at Ion Proton and Omni 2.5-8 SNP loci. B) Box plots of the NGS read depths at the SNP loci showing concordance/discordance among the three platforms. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The three columns (shaded gray rectangle) from right indicate the distribution of read depths of the discordant SNPs between the NGSs and Omni 2.5-8. The read depth at SNP loci that showed Ion Proton discordance against <t>HiSeq</t> 2500 and Omni 2.5-8 was significantly different. The read depths at SNP loci for SNPs that both HiSeq 2500 and Ion Proton failed to call are shown in the gray box.
    Hiseq 2500 System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 6068 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/Illumina Inc
    Average 99 stars, based on 6068 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
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    90
    Illumina Inc hiseq 2000 2500 system
    Box plots of read depths at concordant/discordant SNP loci among the NGSs and Omni 2.5-8. A) Box plots of the NGS read depth at the SNP loci showing concordance/discordance between the NGSs and Omni 2.5-8. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The graph on the left indicates the distribution of read depths at HiSeq2500 SNP loci and the graph on the right indicates the distribution of read depths at Ion Proton and Omni 2.5-8 SNP loci. B) Box plots of the NGS read depths at the SNP loci showing concordance/discordance among the three platforms. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The three columns (shaded gray rectangle) from right indicate the distribution of read depths of the discordant SNPs between the NGSs and Omni 2.5-8. The read depth at SNP loci that showed Ion Proton discordance against <t>HiSeq</t> 2500 and Omni 2.5-8 was significantly different. The read depths at SNP loci for SNPs that both HiSeq 2500 and Ion Proton failed to call are shown in the gray box.
    Hiseq 2000 2500 System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 34 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2000 2500 system/product/Illumina Inc
    Average 90 stars, based on 34 article reviews
    Price from $9.99 to $1999.99
    hiseq 2000 2500 system - by Bioz Stars, 2020-07
    90/100 stars
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    91
    Illumina Inc hiseq 2500 v4 system
    Box plots of read depths at concordant/discordant SNP loci among the NGSs and Omni 2.5-8. A) Box plots of the NGS read depth at the SNP loci showing concordance/discordance between the NGSs and Omni 2.5-8. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The graph on the left indicates the distribution of read depths at HiSeq2500 SNP loci and the graph on the right indicates the distribution of read depths at Ion Proton and Omni 2.5-8 SNP loci. B) Box plots of the NGS read depths at the SNP loci showing concordance/discordance among the three platforms. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The three columns (shaded gray rectangle) from right indicate the distribution of read depths of the discordant SNPs between the NGSs and Omni 2.5-8. The read depth at SNP loci that showed Ion Proton discordance against <t>HiSeq</t> 2500 and Omni 2.5-8 was significantly different. The read depths at SNP loci for SNPs that both HiSeq 2500 and Ion Proton failed to call are shown in the gray box.
    Hiseq 2500 V4 System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 v4 system/product/Illumina Inc
    Average 91 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 v4 system - by Bioz Stars, 2020-07
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    92
    Illumina Inc hiseq 2500 sequencing system
    Illustrated representation of the optimized barcoded cDNA library preparation procedure. Total RNA from formalin-fixed paraffin-embedded (FFPE) specimens ( n = 18), are ligated with 3′ adapters ( n = 18), purified on a 15% PAGE gel (using size markers (SM) RNA oligonucleotides) and excised after SYBR ® gold staining of the gel. The combined purified products are ligated with a 5′ adapter, run on a 12% PAGE gel, excised and purified. The dual-adapter ligated small-RNA products are reverse transcribed, subjected to a pilot PCR for identification of adequate amplification cycle. A large-scale PCR is performed, and the products are separated on a 2% agarose gel, where the upper band (cDNA library) is purified and subjected to sequencing on an Illumina <t>HiSeq-2500</t> sequencer.
    Hiseq 2500 Sequencing System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 1514 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 sequencing system/product/Illumina Inc
    Average 92 stars, based on 1514 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 sequencing system - by Bioz Stars, 2020-07
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    93
    LIFE & BRAIN GmbH hiseq 2500 system
    Illustrated representation of the optimized barcoded cDNA library preparation procedure. Total RNA from formalin-fixed paraffin-embedded (FFPE) specimens ( n = 18), are ligated with 3′ adapters ( n = 18), purified on a 15% PAGE gel (using size markers (SM) RNA oligonucleotides) and excised after SYBR ® gold staining of the gel. The combined purified products are ligated with a 5′ adapter, run on a 12% PAGE gel, excised and purified. The dual-adapter ligated small-RNA products are reverse transcribed, subjected to a pilot PCR for identification of adequate amplification cycle. A large-scale PCR is performed, and the products are separated on a 2% agarose gel, where the upper band (cDNA library) is purified and subjected to sequencing on an Illumina <t>HiSeq-2500</t> sequencer.
    Hiseq 2500 System, supplied by LIFE & BRAIN GmbH, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system/product/LIFE & BRAIN GmbH
    Average 93 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system - by Bioz Stars, 2020-07
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    92
    Illumina Inc hiseq 2500 system rapid mode
    Illustrated representation of the optimized barcoded cDNA library preparation procedure. Total RNA from formalin-fixed paraffin-embedded (FFPE) specimens ( n = 18), are ligated with 3′ adapters ( n = 18), purified on a 15% PAGE gel (using size markers (SM) RNA oligonucleotides) and excised after SYBR ® gold staining of the gel. The combined purified products are ligated with a 5′ adapter, run on a 12% PAGE gel, excised and purified. The dual-adapter ligated small-RNA products are reverse transcribed, subjected to a pilot PCR for identification of adequate amplification cycle. A large-scale PCR is performed, and the products are separated on a 2% agarose gel, where the upper band (cDNA library) is purified and subjected to sequencing on an Illumina <t>HiSeq-2500</t> sequencer.
    Hiseq 2500 System Rapid Mode, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 15 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 system rapid mode/product/Illumina Inc
    Average 92 stars, based on 15 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 system rapid mode - by Bioz Stars, 2020-07
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    Image Search Results


    Box plots of read depths at concordant/discordant SNP loci among the NGSs and Omni 2.5-8. A) Box plots of the NGS read depth at the SNP loci showing concordance/discordance between the NGSs and Omni 2.5-8. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The graph on the left indicates the distribution of read depths at HiSeq2500 SNP loci and the graph on the right indicates the distribution of read depths at Ion Proton and Omni 2.5-8 SNP loci. B) Box plots of the NGS read depths at the SNP loci showing concordance/discordance among the three platforms. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The three columns (shaded gray rectangle) from right indicate the distribution of read depths of the discordant SNPs between the NGSs and Omni 2.5-8. The read depth at SNP loci that showed Ion Proton discordance against HiSeq 2500 and Omni 2.5-8 was significantly different. The read depths at SNP loci for SNPs that both HiSeq 2500 and Ion Proton failed to call are shown in the gray box.

    Journal: BMC Genomics

    Article Title: Validation of multiple single nucleotide variation calls by additional exome analysis with a semiconductor sequencer to supplement data of whole-genome sequencing of a human population

    doi: 10.1186/1471-2164-15-673

    Figure Lengend Snippet: Box plots of read depths at concordant/discordant SNP loci among the NGSs and Omni 2.5-8. A) Box plots of the NGS read depth at the SNP loci showing concordance/discordance between the NGSs and Omni 2.5-8. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The graph on the left indicates the distribution of read depths at HiSeq2500 SNP loci and the graph on the right indicates the distribution of read depths at Ion Proton and Omni 2.5-8 SNP loci. B) Box plots of the NGS read depths at the SNP loci showing concordance/discordance among the three platforms. The box indicates the first and third quartiles and the lines indicate the highest and lowest value that is within 1.5 x inter-quartile range. Outliers were omitted. The three columns (shaded gray rectangle) from right indicate the distribution of read depths of the discordant SNPs between the NGSs and Omni 2.5-8. The read depth at SNP loci that showed Ion Proton discordance against HiSeq 2500 and Omni 2.5-8 was significantly different. The read depths at SNP loci for SNPs that both HiSeq 2500 and Ion Proton failed to call are shown in the gray box.

    Article Snippet: Ten microliters of 2 nM libraries were denatured with an equal volume of 0.1 N sodium hydroxide; 1.5–2.0 pM of the denatured library was then used for on-board cluster generation on a HiSeq 2500 system (Illumina) with a TruSeq Rapid PE Cluster Kit (Illumina).

    Techniques: Next-Generation Sequencing

    Illustrated representation of the optimized barcoded cDNA library preparation procedure. Total RNA from formalin-fixed paraffin-embedded (FFPE) specimens ( n = 18), are ligated with 3′ adapters ( n = 18), purified on a 15% PAGE gel (using size markers (SM) RNA oligonucleotides) and excised after SYBR ® gold staining of the gel. The combined purified products are ligated with a 5′ adapter, run on a 12% PAGE gel, excised and purified. The dual-adapter ligated small-RNA products are reverse transcribed, subjected to a pilot PCR for identification of adequate amplification cycle. A large-scale PCR is performed, and the products are separated on a 2% agarose gel, where the upper band (cDNA library) is purified and subjected to sequencing on an Illumina HiSeq-2500 sequencer.

    Journal: International Journal of Molecular Sciences

    Article Title: Evaluation and Adaptation of a Laboratory-Based cDNA Library Preparation Protocol for Retrospective Sequencing of Archived MicroRNAs from up to 35-Year-Old Clinical FFPE Specimens

    doi: 10.3390/ijms18030627

    Figure Lengend Snippet: Illustrated representation of the optimized barcoded cDNA library preparation procedure. Total RNA from formalin-fixed paraffin-embedded (FFPE) specimens ( n = 18), are ligated with 3′ adapters ( n = 18), purified on a 15% PAGE gel (using size markers (SM) RNA oligonucleotides) and excised after SYBR ® gold staining of the gel. The combined purified products are ligated with a 5′ adapter, run on a 12% PAGE gel, excised and purified. The dual-adapter ligated small-RNA products are reverse transcribed, subjected to a pilot PCR for identification of adequate amplification cycle. A large-scale PCR is performed, and the products are separated on a 2% agarose gel, where the upper band (cDNA library) is purified and subjected to sequencing on an Illumina HiSeq-2500 sequencer.

    Article Snippet: The cDNA libraries were then sequenced (single-read 50 cycles) on a HiSeq 2500 Sequencing System (SY-401-2501, Illumina, San Diego, CA, USA).

    Techniques: cDNA Library Assay, Formalin-fixed Paraffin-Embedded, Purification, Polyacrylamide Gel Electrophoresis, Staining, Polymerase Chain Reaction, Amplification, Agarose Gel Electrophoresis, Sequencing