hiseq 2500 instrument Search Results


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  • 92
    Elim Bio hiseq 2500 instrument
    Hiseq 2500 Instrument, supplied by Elim Bio, used in various techniques. Bioz Stars score: 92/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 instrument/product/Elim Bio
    Average 92 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 instrument - by Bioz Stars, 2020-07
    92/100 stars
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    93
    Macrogen hiseq 2500 instrument
    Hiseq 2500 Instrument, supplied by Macrogen, used in various techniques. Bioz Stars score: 93/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 instrument/product/Macrogen
    Average 93 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 instrument - by Bioz Stars, 2020-07
    93/100 stars
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    99
    Illumina Inc hiseq 2500 instrument
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 2500 Instrument, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 5728 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 instrument/product/Illumina Inc
    Average 99 stars, based on 5728 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 instrument - by Bioz Stars, 2020-07
    99/100 stars
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    90
    Illumina Inc hiseq 2000 2500 instrumentation
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 2000 2500 Instrumentation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 19 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2000 2500 instrumentation/product/Illumina Inc
    Average 90 stars, based on 19 article reviews
    Price from $9.99 to $1999.99
    hiseq 2000 2500 instrumentation - by Bioz Stars, 2020-07
    90/100 stars
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    91
    Illumina Inc hiseq 2500 4000 instrument
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 2500 4000 Instrument, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 4000 instrument/product/Illumina Inc
    Average 91 stars, based on 10 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 4000 instrument - by Bioz Stars, 2020-07
    91/100 stars
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    91
    Illumina Inc hiseq 2500 v3 instrument
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 2500 V3 Instrument, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 v3 instrument/product/Illumina Inc
    Average 91 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 v3 instrument - by Bioz Stars, 2020-07
    91/100 stars
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    93
    Eurofins hiseq 2500 instrument
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 2500 Instrument, supplied by Eurofins, used in various techniques. Bioz Stars score: 93/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 instrument/product/Eurofins
    Average 93 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 instrument - by Bioz Stars, 2020-07
    93/100 stars
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    91
    Fasteris Life hiseq 2500 instrument
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 2500 Instrument, supplied by Fasteris Life, used in various techniques. Bioz Stars score: 91/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 instrument/product/Fasteris Life
    Average 91 stars, based on 10 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 instrument - by Bioz Stars, 2020-07
    91/100 stars
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    91
    Illumina Inc hiseq 2500 sequencing instruments
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 2500 Sequencing Instruments, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 21 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 2500 sequencing instruments/product/Illumina Inc
    Average 91 stars, based on 21 article reviews
    Price from $9.99 to $1999.99
    hiseq 2500 sequencing instruments - by Bioz Stars, 2020-07
    91/100 stars
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    90
    Illumina Inc hiseq rapid 2500 instrument
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq Rapid 2500 Instrument, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq rapid 2500 instrument/product/Illumina Inc
    Average 90 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    hiseq rapid 2500 instrument - by Bioz Stars, 2020-07
    90/100 stars
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    92
    Illumina Inc hiseq 1500 2500 instrument
    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 <t>HiSeq</t> 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.
    Hiseq 1500 2500 Instrument, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 1500 2500 instrument/product/Illumina Inc
    Average 92 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    hiseq 1500 2500 instrument - by Bioz Stars, 2020-07
    92/100 stars
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    Image Search Results


    ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 HiSeq 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.

    Journal: International Journal of Molecular Sciences

    Article Title: Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing

    doi: 10.3390/ijms18092011

    Figure Lengend Snippet: ( A ) Schematic representation of metagenomic sequencing: BAL was split into two aliquots which were independently treated with two DNA extraction protocols: Ultra-Deep Microbiome Prep (Molzym) and NucleoSpin Soil (MN). Metagenomic libraries were independently sequenced with 2 × 250 HiSeq 2500 and 2 × 100 Hiseq 2000, respectively; ( B ) Schematic representation of bioinformatics analyses: forward and reverse raw reads of Molzym- (HiSeq Molzym (2 × 250)) and MN-treated (HiSeq MN (2 × 100)) samples were used for taxonomic analysis with CLARK, Kraken and MetaPhlAn2. In addition, before taxonomic analyses, read pairs of the HiSeq Molzym (2 × 250) dataset were either quality-filtered and merged (HiSeq Molzym merged) or trimmed to the length of 100 nt (HiSeq Molzym trimmed to 2 × 100) as described in Materials and Methods; ( C ) Pie-charts representing the proportions (%) of sequencing reads classified as human (in blue), prokaryotic (red) or unclassified (grey) by CLARK (top row) and Kraken (bottom row). Proportions were computed over the total number of reads present in a given dataset. Viral- and fungal-classified read proportions are not shown and contributed to less 0.02% of total reads in all sequencing datasets.

    Article Snippet: The libraries were sequenced in Rapid Run mode for 2 × 250 + 8 cycles on an Illumina HiSeq 2500 instrument at Fasteris (Geneva, Switzerland) using HiSeq Control Software 2.2.58 (Illumina, San Diego, CA, USA).

    Techniques: Sequencing, DNA Extraction