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  • 99
    Illumina Inc genome analyzer iix gaiix
    Ago HITS-CLIP analysis of stromal and endothelial cells. (A): Basic experimental scheme of Ago HITS-CLIP as adapted from Chi et al. UV cross-linked cells are lyzed and treated with RNase to reduce the length of mRNA fragments. Ago is immune-precipitated with monoclonal anti-Ago antibody 2A8, P32-labeled 3′ RNA linker ligated (on-bead), and resolved by SDS-PAGE electrophoresis. The protein-RNA-complex is transferred to nitrocellulose and visualized by autoradiography. In the representative autoradiograph shown, a major band is seen ~110 kD and a more diffuse band at ~130 kD. The RNA-protein complex in the 110–130 kD region is isolated and a 5′ RNA linker is ligated. The isolated RNA is reverse transcribed and PCR amplified with <t>Illumina-compatible</t> primers to generate a cDNA library (typical agarose gel shown). The cDNA libraries are then gel purified and sequenced on Illumina GA <t>IIx</t> and resultant bioinformatically analyzed. (B): Distribution of aligned reads from HS27A samples to different gene annotations. (C): Correlation of consensus peaks between HS5 and HS27A. Coefficient of determination ( R 2 determined by corrplot [R-package]). (D): Correlation of consensus peaks between HS5 and hMSC. (E): Correlation of consensus peaks between HS27A and hMSC. (F): Correlation of consensus peaks between TrHBMEC and HUVEC. (G): Overlap of genes enriched by consensus peaks between stromal cells (HS5, HS27A, and hMSC). (H): Overlap of genes enriched by consensus peaks between endothelial cells (TrHBMEC and HUVEC). Abbreviations: hMSC, human mesenchymal stromal cell; HUVEC, human umbilical vein endothelial cell; TrHBMEC, transformed human bone marrow endothelial cells; UV, ultraviolet.
    Genome Analyzer Iix Gaiix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 2193 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix gaiix/product/Illumina Inc
    Average 99 stars, based on 2193 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix gaiix - by Bioz Stars, 2020-02
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    83
    Illumina Inc genome analyzer iix gaiix platform
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Gaiix Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 83/100, based on 197 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix gaiix platform/product/Illumina Inc
    Average 83 stars, based on 197 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix gaiix platform - by Bioz Stars, 2020-02
    83/100 stars
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    80
    Illumina Inc genome analyzer iix ultrasequencer
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Ultrasequencer, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 80/100, based on 13 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix ultrasequencer/product/Illumina Inc
    Average 80 stars, based on 13 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix ultrasequencer - by Bioz Stars, 2020-02
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    99
    Illumina Inc genome analyzer iix system
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 452 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix system/product/Illumina Inc
    Average 99 stars, based on 452 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix system - by Bioz Stars, 2020-02
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    91
    Illumina Inc genome analyzer iix machine
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Machine, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 78 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix machine/product/Illumina Inc
    Average 91 stars, based on 78 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix machine - by Bioz Stars, 2020-02
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    99
    Illumina Inc genome analyzer iix sequencer
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Sequencer, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 343 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix sequencer/product/Illumina Inc
    Average 99 stars, based on 343 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix sequencer - by Bioz Stars, 2020-02
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    77
    Illumina Inc anillumina genome analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Anillumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 77/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/anillumina genome analyzer iix/product/Illumina Inc
    Average 77 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    anillumina genome analyzer iix - by Bioz Stars, 2020-02
    77/100 stars
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    79
    Illumina Inc genome analyzer iix device
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Device, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 79/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix device/product/Illumina Inc
    Average 79 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix device - by Bioz Stars, 2020-02
    79/100 stars
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    79
    Illumina Inc genome analyzer iix ga iix sequencing platform
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Ga Iix Sequencing Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 79/100, based on 41 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix ga iix sequencing platform/product/Illumina Inc
    Average 79 stars, based on 41 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix ga iix sequencing platform - by Bioz Stars, 2020-02
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    78
    Illumina Inc genome analyzer iix analysis
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Analysis, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 78/100, based on 9 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix analysis/product/Illumina Inc
    Average 78 stars, based on 9 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix analysis - by Bioz Stars, 2020-02
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    79
    Illumina Inc genomics analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genomics Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 79/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genomics analyzer iix/product/Illumina Inc
    Average 79 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    genomics analyzer iix - by Bioz Stars, 2020-02
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    88
    Solexa solexa genome analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Solexa Genome Analyzer Iix, supplied by Solexa, used in various techniques. Bioz Stars score: 88/100, based on 86 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/solexa genome analyzer iix/product/Solexa
    Average 88 stars, based on 86 article reviews
    Price from $9.99 to $1999.99
    solexa genome analyzer iix - by Bioz Stars, 2020-02
    88/100 stars
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    77
    Illumina Inc genome analyzer iix apparatus
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Apparatus, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 77/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix apparatus/product/Illumina Inc
    Average 77 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix apparatus - by Bioz Stars, 2020-02
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    78
    Illumina Inc hiseq genome analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Hiseq Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 78/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq genome analyzer iix/product/Illumina Inc
    Average 78 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    hiseq genome analyzer iix - by Bioz Stars, 2020-02
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    81
    Illumina Inc genomics analyzer iix platform
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genomics Analyzer Iix Platform, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 81/100, based on 16 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genomics analyzer iix platform/product/Illumina Inc
    Average 81 stars, based on 16 article reviews
    Price from $9.99 to $1999.99
    genomics analyzer iix platform - by Bioz Stars, 2020-02
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    77
    Illumina Inc short read illumina genome analyzer iix gaiix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Short Read Illumina Genome Analyzer Iix Gaiix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 77/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/short read illumina genome analyzer iix gaiix/product/Illumina Inc
    Average 77 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    short read illumina genome analyzer iix gaiix - by Bioz Stars, 2020-02
    77/100 stars
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    79
    Illumina Inc genome analyzer iix fastq files
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Fastq Files, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 79/100, based on 6 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix fastq files/product/Illumina Inc
    Average 79 stars, based on 6 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix fastq files - by Bioz Stars, 2020-02
    79/100 stars
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    78
    Illumina Inc single illumina genome analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Single Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 78/100, based on 11 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/single illumina genome analyzer iix/product/Illumina Inc
    Average 78 stars, based on 11 article reviews
    Price from $9.99 to $1999.99
    single illumina genome analyzer iix - by Bioz Stars, 2020-02
    78/100 stars
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    81
    Illumina Inc genome analyzer iix user guide
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix User Guide, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 81/100, based on 22 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix user guide/product/Illumina Inc
    Average 81 stars, based on 22 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix user guide - by Bioz Stars, 2020-02
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    77
    Illumina Inc gpl10999 illumina genome analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Gpl10999 Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 77/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/gpl10999 illumina genome analyzer iix/product/Illumina Inc
    Average 77 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    gpl10999 illumina genome analyzer iix - by Bioz Stars, 2020-02
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    77
    Illumina Inc genome analyzer iix 100 bp
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix 100 Bp, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 77/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix 100 bp/product/Illumina Inc
    Average 77 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix 100 bp - by Bioz Stars, 2020-02
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    86
    Illumina Inc genome analyzer iix sequencing
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Sequencing, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 86/100, based on 34 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix sequencing/product/Illumina Inc
    Average 86 stars, based on 34 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix sequencing - by Bioz Stars, 2020-02
    86/100 stars
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    80
    Illumina Inc ngs sequencer genome analyser iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Ngs Sequencer Genome Analyser Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 80/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ngs sequencer genome analyser iix/product/Illumina Inc
    Average 80 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    ngs sequencer genome analyser iix - by Bioz Stars, 2020-02
    80/100 stars
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    78
    Illumina Inc gpl13779 illumina genome analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Gpl13779 Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 78/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/gpl13779 illumina genome analyzer iix/product/Illumina Inc
    Average 78 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    gpl13779 illumina genome analyzer iix - by Bioz Stars, 2020-02
    78/100 stars
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    79
    Illumina Inc genome analyzer iix dna
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Dna, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 79/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix dna/product/Illumina Inc
    Average 79 stars, based on 5 article reviews
    Price from $9.99 to $1999.99
    genome analyzer iix dna - by Bioz Stars, 2020-02
    79/100 stars
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    79
    Illumina Inc paired end illumina genome analyzer iix
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Paired End Illumina Genome Analyzer Iix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 79/100, based on 8 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/paired end illumina genome analyzer iix/product/Illumina Inc
    Average 79 stars, based on 8 article reviews
    Price from $9.99 to $1999.99
    paired end illumina genome analyzer iix - by Bioz Stars, 2020-02
    79/100 stars
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    76
    Illumina Inc genomic analyser iix sequencer
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genomic Analyser Iix Sequencer, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 76/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genomic analyser iix sequencer/product/Illumina Inc
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    Illumina Inc genome analyzer iix sequencing machine
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Sequencing Machine, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 78/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix sequencing machine/product/Illumina Inc
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    genome analyzer iix sequencing machine - by Bioz Stars, 2020-02
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    Illumina Inc genome analyzer iix sequencing system
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Sequencing System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 85/100, based on 52 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix sequencing system/product/Illumina Inc
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    Illumina Inc genome analyzer iix run accession srr944107
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Run Accession Srr944107, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 78/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix run accession srr944107/product/Illumina Inc
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    Illumina Inc genome analyzer iix poly dt
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Poly Dt, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 78/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome analyzer iix poly dt/product/Illumina Inc
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    Illumina Inc genome analyzer iix dna sequencer
    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on <t>Illumina</t> Genome Analyzer <t>IIx</t> platform.
    Genome Analyzer Iix Dna Sequencer, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 88/100, based on 16 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Ago HITS-CLIP analysis of stromal and endothelial cells. (A): Basic experimental scheme of Ago HITS-CLIP as adapted from Chi et al. UV cross-linked cells are lyzed and treated with RNase to reduce the length of mRNA fragments. Ago is immune-precipitated with monoclonal anti-Ago antibody 2A8, P32-labeled 3′ RNA linker ligated (on-bead), and resolved by SDS-PAGE electrophoresis. The protein-RNA-complex is transferred to nitrocellulose and visualized by autoradiography. In the representative autoradiograph shown, a major band is seen ~110 kD and a more diffuse band at ~130 kD. The RNA-protein complex in the 110–130 kD region is isolated and a 5′ RNA linker is ligated. The isolated RNA is reverse transcribed and PCR amplified with Illumina-compatible primers to generate a cDNA library (typical agarose gel shown). The cDNA libraries are then gel purified and sequenced on Illumina GA IIx and resultant bioinformatically analyzed. (B): Distribution of aligned reads from HS27A samples to different gene annotations. (C): Correlation of consensus peaks between HS5 and HS27A. Coefficient of determination ( R 2 determined by corrplot [R-package]). (D): Correlation of consensus peaks between HS5 and hMSC. (E): Correlation of consensus peaks between HS27A and hMSC. (F): Correlation of consensus peaks between TrHBMEC and HUVEC. (G): Overlap of genes enriched by consensus peaks between stromal cells (HS5, HS27A, and hMSC). (H): Overlap of genes enriched by consensus peaks between endothelial cells (TrHBMEC and HUVEC). Abbreviations: hMSC, human mesenchymal stromal cell; HUVEC, human umbilical vein endothelial cell; TrHBMEC, transformed human bone marrow endothelial cells; UV, ultraviolet.

    Journal: Stem cells (Dayton, Ohio)

    Article Title: Genome-Wide Analysis of miRNA-mRNA Interactions in Marrow Stromal Cells

    doi: 10.1002/stem.1531

    Figure Lengend Snippet: Ago HITS-CLIP analysis of stromal and endothelial cells. (A): Basic experimental scheme of Ago HITS-CLIP as adapted from Chi et al. UV cross-linked cells are lyzed and treated with RNase to reduce the length of mRNA fragments. Ago is immune-precipitated with monoclonal anti-Ago antibody 2A8, P32-labeled 3′ RNA linker ligated (on-bead), and resolved by SDS-PAGE electrophoresis. The protein-RNA-complex is transferred to nitrocellulose and visualized by autoradiography. In the representative autoradiograph shown, a major band is seen ~110 kD and a more diffuse band at ~130 kD. The RNA-protein complex in the 110–130 kD region is isolated and a 5′ RNA linker is ligated. The isolated RNA is reverse transcribed and PCR amplified with Illumina-compatible primers to generate a cDNA library (typical agarose gel shown). The cDNA libraries are then gel purified and sequenced on Illumina GA IIx and resultant bioinformatically analyzed. (B): Distribution of aligned reads from HS27A samples to different gene annotations. (C): Correlation of consensus peaks between HS5 and HS27A. Coefficient of determination ( R 2 determined by corrplot [R-package]). (D): Correlation of consensus peaks between HS5 and hMSC. (E): Correlation of consensus peaks between HS27A and hMSC. (F): Correlation of consensus peaks between TrHBMEC and HUVEC. (G): Overlap of genes enriched by consensus peaks between stromal cells (HS5, HS27A, and hMSC). (H): Overlap of genes enriched by consensus peaks between endothelial cells (TrHBMEC and HUVEC). Abbreviations: hMSC, human mesenchymal stromal cell; HUVEC, human umbilical vein endothelial cell; TrHBMEC, transformed human bone marrow endothelial cells; UV, ultraviolet.

    Article Snippet: Sequencing was performed on an Illumina Genome Analyzer IIx (single end 50 base pair reads).

    Techniques: Cross-linking Immunoprecipitation, Labeling, SDS Page, Electrophoresis, Autoradiography, Isolation, Polymerase Chain Reaction, Amplification, cDNA Library Assay, Agarose Gel Electrophoresis, Purification, Transformation Assay

    Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on Illumina Genome Analyzer IIx platform.

    Journal: Nucleic Acids Research

    Article Title: Efficient identification of rare variants in large populations: deep re-sequencing the CRP locus in the CARDIA study

    doi: 10.1093/nar/gkt092

    Figure Lengend Snippet: Pooling scheme for sequencing experiment 2. We selected 96 samples across three 384-well plates based on their position on the plate, such that each sample was present in exactly 3 of the 72 pools and majority of the samples can be uniquely identified based on the pattern of positive pools. For the first 24 pools, samples in the same columns were combined. For the next 24 pools, samples in the same rows were combined. Lastly, samples in the same well position across plates were combined into a total of 24 pools. This pooling scheme resulted in a total of 72 pools that can be sequenced in six lanes on Illumina Genome Analyzer IIx platform.

    Article Snippet: This pooling scheme resulted in 24 pools overall, which were sequenced using two lanes on the Illumina Genome Analyzer IIx platform.

    Techniques: Sequencing