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Addgene inc pat15484 hf abe8e
a The heatmap shows mean on-target activity of three parallel transfections normalised to the active splice donor site plasmid. A set of 34 previously used targets (Fig. ) were used to determine on-target editing efficiencies of dABE8e, nABE8e and 6 increased fidelity <t>ABE8e</t> base editors. b Mismatch tolerance of ABE8e and its increased fidelity variants were compared utilising the exact same matching sgRNA (target 1 in Fig. ) and 50 sgRNAs mismatching in one, two, three, four or five positions as indicated as red letters. Blue and yellow heatmaps show the mean normalised activity (off-target/on-target) derived from three parallel transfections. White and red heatmaps show the mean on-target activity (percentages of GFP positive cells) derived from three parallel transfections. For source data see the Source Data file.
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Image Search Results


a The heatmap shows mean on-target activity of three parallel transfections normalised to the active splice donor site plasmid. A set of 34 previously used targets (Fig. ) were used to determine on-target editing efficiencies of dABE8e, nABE8e and 6 increased fidelity ABE8e base editors. b Mismatch tolerance of ABE8e and its increased fidelity variants were compared utilising the exact same matching sgRNA (target 1 in Fig. ) and 50 sgRNAs mismatching in one, two, three, four or five positions as indicated as red letters. Blue and yellow heatmaps show the mean normalised activity (off-target/on-target) derived from three parallel transfections. White and red heatmaps show the mean on-target activity (percentages of GFP positive cells) derived from three parallel transfections. For source data see the Source Data file.

Journal: Nature Communications

Article Title: BEAR reveals that increased fidelity variants can successfully reduce the mismatch tolerance of adenine but not cytosine base editors

doi: 10.1038/s41467-021-26461-y

Figure Lengend Snippet: a The heatmap shows mean on-target activity of three parallel transfections normalised to the active splice donor site plasmid. A set of 34 previously used targets (Fig. ) were used to determine on-target editing efficiencies of dABE8e, nABE8e and 6 increased fidelity ABE8e base editors. b Mismatch tolerance of ABE8e and its increased fidelity variants were compared utilising the exact same matching sgRNA (target 1 in Fig. ) and 50 sgRNAs mismatching in one, two, three, four or five positions as indicated as red letters. Blue and yellow heatmaps show the mean normalised activity (off-target/on-target) derived from three parallel transfections. White and red heatmaps show the mean on-target activity (percentages of GFP positive cells) derived from three parallel transfections. For source data see the Source Data file.

Article Snippet: The following plasmids developed in this study are available from Addgene: pAT9624-BEAR-cloning (#162986), pAT9658-sgRNA-mCherry (#162987), pAT9679-sgRNA-BFP (#162988), pAT9651-BEAR-GFP (#162989), pAT9750-BEAR-mCherry (#162990), pAT9752-BEAR-mScarlet (#162991), pAT9650-BEAR-GFP-active (#162992), pAT9751-BEAR-mCherry-active (#162993), pAT9753-BEAR-mScarlet-active (#162994), pAT15415-BEAR-GFP-target-mCherry (#162995), pAT15416-BEAR-mScarlet-target-BFP (#162996), pAT9676-ABE (#162997), pAT9749-dABE (#162998), pAT9991-eABE (#162999), pAT9992-HF-ABE (#163000), pAT9993-Hypa-ABE (#163001), pAT9994-HypaR661A-ABE (#163002), pAT9995-evoABE (#163003), pAT9996-HeF-ABE (#163004), pAT9675-CBE (#163007), pAT9748-dCBE (#163008), pAT15064-eCBE (#163009), pAT15065-HF-CBE (#163010), pAT15066-Hypa-CBE (#163011), pAT15067-HypaA-CBE (#163012), pAT15068-evoCBE (#163013), pAT15069-HeF-CBE (#163014), pAT15516-BEAR-GFP-2in1 (#174082), pAT15482_ABE8e (#174120), pAT15483_e-ABE8e (#174121), pAT15484_HF-ABE8e (#174122), pAT15485_Hypa-ABE8e (#174123), pAT15486_HypaR661A-ABE8e (#174124), pAT15487_evo-ABE8e (#174125), pAT15488_HeF-ABE8e (#174126), pAT15489_dABE8e (#174127).

Techniques: Activity Assay, Transfection, Plasmid Preparation, Derivative Assay