end adenylation Illumina Inc Search Results


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  • 99
    Illumina Inc adapters
    Untangling complex regions. In the case of repetitive regions (represented by dark blue rectangles), the NaS workflow produced several contigs per MinION® template (Step3 and Step4). Indeed, the NaS read is fragmented, due to the indeterminate position of the repetitive region, contig2. Step5. Construction of the contig graph weighted with the seed-reads coverage of the given contig. Contig2, which represents the repetitive region, is linked to four different contigs. Step6. The contigs present in the path with the highest weight (contig1 – contig2 – contig3) are selected, using the Floyd-Warshall algorithm, and assembled to generate the final NaS read. Step7. The consistency of the synthetic NaS read is checked by aligning the initial <t>Illumina</t> reads set and detecting gap of coverage.
    Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 761 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/adapters/product/Illumina Inc
    Average 99 stars, based on 761 article reviews
    Price from $9.99 to $1999.99
    adapters - by Bioz Stars, 2020-04
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    99
    Illumina Inc adenylation
    Untangling complex regions. In the case of repetitive regions (represented by dark blue rectangles), the NaS workflow produced several contigs per MinION® template (Step3 and Step4). Indeed, the NaS read is fragmented, due to the indeterminate position of the repetitive region, contig2. Step5. Construction of the contig graph weighted with the seed-reads coverage of the given contig. Contig2, which represents the repetitive region, is linked to four different contigs. Step6. The contigs present in the path with the highest weight (contig1 – contig2 – contig3) are selected, using the Floyd-Warshall algorithm, and assembled to generate the final NaS read. Step7. The consistency of the synthetic NaS read is checked by aligning the initial <t>Illumina</t> reads set and detecting gap of coverage.
    Adenylation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 1253 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/adenylation/product/Illumina Inc
    Average 99 stars, based on 1253 article reviews
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    adenylation - by Bioz Stars, 2020-04
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    94
    Illumina Inc paired end adaptors
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Paired End Adaptors, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 200 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/paired end adaptors/product/Illumina Inc
    Average 94 stars, based on 200 article reviews
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    paired end adaptors - by Bioz Stars, 2020-04
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    99
    Illumina Inc illumina sequencing adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Sequencing Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 4645 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina sequencing adapters/product/Illumina Inc
    Average 99 stars, based on 4645 article reviews
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    illumina sequencing adapters - by Bioz Stars, 2020-04
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    99
    Illumina Inc paired end sequencing adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Paired End Sequencing Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 517 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/paired end sequencing adapters/product/Illumina Inc
    Average 99 stars, based on 517 article reviews
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    93
    Illumina Inc specific paired end adaptors
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Specific Paired End Adaptors, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/specific paired end adaptors/product/Illumina Inc
    Average 93 stars, based on 10 article reviews
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    99
    Illumina Inc paired end dna sample prep kit
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Paired End Dna Sample Prep Kit, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 834 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Average 99 stars, based on 834 article reviews
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    97
    Illumina Inc illumina truseq adaptors
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Truseq Adaptors, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 97/100, based on 367 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    93
    Illumina Inc adaptors ligation
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Adaptors Ligation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 37 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/adaptors ligation/product/Illumina Inc
    Average 93 stars, based on 37 article reviews
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    97
    Illumina Inc standard illumina adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Standard Illumina Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 97/100, based on 219 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/standard illumina adapters/product/Illumina Inc
    Average 97 stars, based on 219 article reviews
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    standard illumina adapters - by Bioz Stars, 2020-04
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    95
    Illumina Inc illumina kits
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Kits, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 95/100, based on 291 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina kits/product/Illumina Inc
    Average 95 stars, based on 291 article reviews
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    illumina kits - by Bioz Stars, 2020-04
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    94
    Illumina Inc illumina compatible adaptors
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Compatible Adaptors, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 185 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina compatible adaptors/product/Illumina Inc
    Average 94 stars, based on 185 article reviews
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    illumina compatible adaptors - by Bioz Stars, 2020-04
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    93
    Illumina Inc truseq dna lt adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Truseq Dna Lt Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 23 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/truseq dna lt adapters/product/Illumina Inc
    Average 93 stars, based on 23 article reviews
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    truseq dna lt adapters - by Bioz Stars, 2020-04
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    86
    Illumina Inc single end sequencing adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Single End Sequencing Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 86/100, based on 15 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/single end sequencing adapters/product/Illumina Inc
    Average 86 stars, based on 15 article reviews
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    single end sequencing adapters - by Bioz Stars, 2020-04
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    91
    Illumina Inc ta ligation
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Ta Ligation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 21 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ta ligation/product/Illumina Inc
    Average 91 stars, based on 21 article reviews
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    95
    Illumina Inc illumina sequencing adaptors
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Sequencing Adaptors, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 95/100, based on 43 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina sequencing adaptors/product/Illumina Inc
    Average 95 stars, based on 43 article reviews
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    illumina sequencing adaptors - by Bioz Stars, 2020-04
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    93
    Illumina Inc overhang a
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Overhang A, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 52 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/overhang a/product/Illumina Inc
    Average 93 stars, based on 52 article reviews
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    overhang a - by Bioz Stars, 2020-04
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    91
    Illumina Inc paired end adapter oligonucleotides
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Paired End Adapter Oligonucleotides, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 42 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/paired end adapter oligonucleotides/product/Illumina Inc
    Average 91 stars, based on 42 article reviews
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    99
    Illumina Inc illumina adapter ligation
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Adapter Ligation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 786 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina adapter ligation/product/Illumina Inc
    Average 99 stars, based on 786 article reviews
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    illumina adapter ligation - by Bioz Stars, 2020-04
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    94
    Illumina Inc illumina truseq adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Truseq Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 37 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina truseq adapters/product/Illumina Inc
    Average 94 stars, based on 37 article reviews
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    illumina truseq adapters - by Bioz Stars, 2020-04
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    94
    Illumina Inc multiplex barcode adaptors
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Multiplex Barcode Adaptors, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 61 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/multiplex barcode adaptors/product/Illumina Inc
    Average 94 stars, based on 61 article reviews
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    multiplex barcode adaptors - by Bioz Stars, 2020-04
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    96
    Illumina Inc illumina sequencing compatible
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Sequencing Compatible, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 96/100, based on 31 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina sequencing compatible/product/Illumina Inc
    Average 96 stars, based on 31 article reviews
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    illumina sequencing compatible - by Bioz Stars, 2020-04
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    91
    Illumina Inc index pe adaptor oligo mix
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Index Pe Adaptor Oligo Mix, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 33 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Average 91 stars, based on 33 article reviews
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    index pe adaptor oligo mix - by Bioz Stars, 2020-04
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    95
    Illumina Inc adenylate
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Adenylate, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 95/100, based on 23 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/adenylate/product/Illumina Inc
    Average 95 stars, based on 23 article reviews
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    99
    Illumina Inc illumina indexes
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Indexes, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 367 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina indexes/product/Illumina Inc
    Average 99 stars, based on 367 article reviews
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    illumina indexes - by Bioz Stars, 2020-04
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    94
    Illumina Inc pe adaptors
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Pe Adaptors, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/pe adaptors/product/Illumina Inc
    Average 94 stars, based on 10 article reviews
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    pe adaptors - by Bioz Stars, 2020-04
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    95
    Illumina Inc illumina phycoerythrin pe
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Phycoerythrin Pe, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 95/100, based on 14 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina phycoerythrin pe/product/Illumina Inc
    Average 95 stars, based on 14 article reviews
    Price from $9.99 to $1999.99
    illumina phycoerythrin pe - by Bioz Stars, 2020-04
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    94
    Illumina Inc illumina truseq style adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Truseq Style Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina truseq style adapters/product/Illumina Inc
    Average 94 stars, based on 10 article reviews
    Price from $9.99 to $1999.99
    illumina truseq style adapters - by Bioz Stars, 2020-04
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    96
    Illumina Inc truseq sequencing adapters
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Truseq Sequencing Adapters, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 96/100, based on 142 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/truseq sequencing adapters/product/Illumina Inc
    Average 96 stars, based on 142 article reviews
    Price from $9.99 to $1999.99
    truseq sequencing adapters - by Bioz Stars, 2020-04
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    99
    Illumina Inc hiseq 2000 system
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Hiseq 2000 System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 9717 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc illumina specific adapter sequences
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Illumina Specific Adapter Sequences, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 63 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Illumina Inc sequencing primer adaptor
    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, <t>Illumina</t> specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.
    Sequencing Primer Adaptor, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 91/100, based on 87 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Untangling complex regions. In the case of repetitive regions (represented by dark blue rectangles), the NaS workflow produced several contigs per MinION® template (Step3 and Step4). Indeed, the NaS read is fragmented, due to the indeterminate position of the repetitive region, contig2. Step5. Construction of the contig graph weighted with the seed-reads coverage of the given contig. Contig2, which represents the repetitive region, is linked to four different contigs. Step6. The contigs present in the path with the highest weight (contig1 – contig2 – contig3) are selected, using the Floyd-Warshall algorithm, and assembled to generate the final NaS read. Step7. The consistency of the synthetic NaS read is checked by aligning the initial Illumina reads set and detecting gap of coverage.

    Journal: BMC Genomics

    Article Title: Genome assembly using Nanopore-guided long and error-free DNA reads

    doi: 10.1186/s12864-015-1519-z

    Figure Lengend Snippet: Untangling complex regions. In the case of repetitive regions (represented by dark blue rectangles), the NaS workflow produced several contigs per MinION® template (Step3 and Step4). Indeed, the NaS read is fragmented, due to the indeterminate position of the repetitive region, contig2. Step5. Construction of the contig graph weighted with the seed-reads coverage of the given contig. Contig2, which represents the repetitive region, is linked to four different contigs. Step6. The contigs present in the path with the highest weight (contig1 – contig2 – contig3) are selected, using the Floyd-Warshall algorithm, and assembled to generate the final NaS read. Step7. The consistency of the synthetic NaS read is checked by aligning the initial Illumina reads set and detecting gap of coverage.

    Article Snippet: Fragments were end-repaired, 3′-adenylated and Illumina adapters were then added using the NEBNext Sample Reagent Set (New England Biolabs, Ipswich, MA, USA).

    Techniques: Produced

    Comparison of Illumina and NaS reads assemblies. The figure shows a capture of a 700 kb genomic region from Acinetobacter baylyi ADP1 . The first track contains rDNA clusters 5, 6 and 7 (purple rectangles). The orange rectangles represent alignments of contigs from the Illumina-only assembly, whereas blue rectangle represents the alignment of the NaS assembly contig. The three plots represent respectively the coverage of Illumina, Nas 2D and MinION® 2D reads. We observed that breakpoints of the Illumina assembly coincide in part with rDNA clusters, in contrast with the NaS assembly which exhibits a perfect alignment.

    Journal: BMC Genomics

    Article Title: Genome assembly using Nanopore-guided long and error-free DNA reads

    doi: 10.1186/s12864-015-1519-z

    Figure Lengend Snippet: Comparison of Illumina and NaS reads assemblies. The figure shows a capture of a 700 kb genomic region from Acinetobacter baylyi ADP1 . The first track contains rDNA clusters 5, 6 and 7 (purple rectangles). The orange rectangles represent alignments of contigs from the Illumina-only assembly, whereas blue rectangle represents the alignment of the NaS assembly contig. The three plots represent respectively the coverage of Illumina, Nas 2D and MinION® 2D reads. We observed that breakpoints of the Illumina assembly coincide in part with rDNA clusters, in contrast with the NaS assembly which exhibits a perfect alignment.

    Article Snippet: Fragments were end-repaired, 3′-adenylated and Illumina adapters were then added using the NEBNext Sample Reagent Set (New England Biolabs, Ipswich, MA, USA).

    Techniques:

    The NaS workflow. Inputs are the Illumina short reads and the MinION® reads (1D and 2D), purple bars on MinION® reads represent sequencing errors. Step1. Illumina reads are aligned on the MinION® templates to select seed - reads (light blue rectangles). Step2. Seed - reads are used to recruit similar reads in the initial Illumina read set. Step3. Good recruits (i.e., reads coming from the right genomic region) are light blue rectangles, bad recruits (i.e., reads coming from another similar genomic region) are red rectangles. Step4. Overlap-layout-consensus-based assembly of the recruited-reads and the seed-reads . Outputted contigs (light blue and red rectangles) are then filtered using seed-read alignments. In this example, after filtering step, a single contig representing the final NaS read is produced.

    Journal: BMC Genomics

    Article Title: Genome assembly using Nanopore-guided long and error-free DNA reads

    doi: 10.1186/s12864-015-1519-z

    Figure Lengend Snippet: The NaS workflow. Inputs are the Illumina short reads and the MinION® reads (1D and 2D), purple bars on MinION® reads represent sequencing errors. Step1. Illumina reads are aligned on the MinION® templates to select seed - reads (light blue rectangles). Step2. Seed - reads are used to recruit similar reads in the initial Illumina read set. Step3. Good recruits (i.e., reads coming from the right genomic region) are light blue rectangles, bad recruits (i.e., reads coming from another similar genomic region) are red rectangles. Step4. Overlap-layout-consensus-based assembly of the recruited-reads and the seed-reads . Outputted contigs (light blue and red rectangles) are then filtered using seed-read alignments. In this example, after filtering step, a single contig representing the final NaS read is produced.

    Article Snippet: Fragments were end-repaired, 3′-adenylated and Illumina adapters were then added using the NEBNext Sample Reagent Set (New England Biolabs, Ipswich, MA, USA).

    Techniques: Sequencing, Produced

    The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, Illumina specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.

    Journal: PLoS ONE

    Article Title: Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)

    doi: 10.1371/journal.pone.0110377

    Figure Lengend Snippet: The SNP selection workflow. The SNP selection process was a cascade involving four steps: Detection, Quality Filtering, Illumina specific Filtering and SNP Selection, with the number of SNPs reduced after each step. The specific filtering criteria have been reported for each filtering stage, as well as the number of resulting SNPs, with the corresponding percentage survival, relative to the total number of SNP markers after the previous step. From the 20,000 selected, Illumina successfully incorporated a total of 18,019 SNP probes into the new array, 14,714 of which were newly discovered and 3,305 previously validated.

    Article Snippet: The resulting fragments were end-repaired, adenylated and ligated to Illumina paired-end adaptors.

    Techniques: Selection

    Bisulfite capture procedure. Genomic DNA was randomly fragmented according to the standard Illumina protocol and ligated to custom-synthesized adaptors in which each C was replaced by 5-meC. The ligation was size-fractionated to select material from 150–300 bases in length. The gel-eluted material was treated with sodium bisulfite (see Methods) and then PCR-enriched using Illumina paired-end PCR primers. The resulting products were hybridized to custom-synthesized Agilent 244K arrays containing probes complementary to the A-rich strands. Hybridizations were carried out with Agilent array CGH buffers under standard conditions. After washing, captured fragments were eluted in water at 95°C and amplified again prior to quantification and sequencing on the Illumina GA2 platform.

    Journal: Genome Research

    Article Title: High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing

    doi: 10.1101/gr.095190.109

    Figure Lengend Snippet: Bisulfite capture procedure. Genomic DNA was randomly fragmented according to the standard Illumina protocol and ligated to custom-synthesized adaptors in which each C was replaced by 5-meC. The ligation was size-fractionated to select material from 150–300 bases in length. The gel-eluted material was treated with sodium bisulfite (see Methods) and then PCR-enriched using Illumina paired-end PCR primers. The resulting products were hybridized to custom-synthesized Agilent 244K arrays containing probes complementary to the A-rich strands. Hybridizations were carried out with Agilent array CGH buffers under standard conditions. After washing, captured fragments were eluted in water at 95°C and amplified again prior to quantification and sequencing on the Illumina GA2 platform.

    Article Snippet: Adenylated fragments were ligated to Illumina-compatible paired-end adaptors synthesized with 5′-methyl-cytosine instead of cytosine (Illumina) and fragments ranging from 150 to 300 bp were extracted by gel purification using the QIAquick gel extraction kit (Qiagen) followed by elution in 30 μL elution buffer.

    Techniques: Synthesized, Ligation, Polymerase Chain Reaction, Amplification, Sequencing