dynabeads oligo Thermo Fisher Search Results


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  • 99
    Thermo Fisher dynabeads oligo
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    Thermo Fisher dynabeads mrna direct purification kit
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    Thermo Fisher dynabeads mrna direct micro purification kit
    <t>Pre-mRNA</t> features that correlate with the extent of cotranscriptional splicing. ( A ) Cotranscriptional splicing levels differ based on gene position. The box plot shows the distribution of nRNA SPIs for the group of single intron genes and first, internal (second, third, and other), or last introns in multi-intron genes. The box width corresponds to the respective group size. ( B ) mRNA splicing levels differ between introns in different gene positions. Analogous data representation as in A . ( C ) One quarter of introns are significantly less or more spliced than the next downstream (3′) intron in nRNA, as depicted in a volcano plot (three biological replicates). ( D ) 15/42 analyzed gene architecture features correlate significantly with differentially spliced intron pairs (sequence-based in black font and RNA-seq-derived in gray font). The smaller intron position for “low” spliced introns in a pair (first intron – 1, second intron – 2, etc.) is consistent with enrichment of first introns in the “5′ less spliced” group. The median modified Z -score is shown for each feature with significant difference between the “low” and “high” groups, and the respective negative log 10 of the Bonferroni-corrected P -value is given. For two features, no change in the median modified Z -score is visible. The respective feature distribution is presented as a box plot below . Asterisks indicate significance of <t>direct</t> neighbors according to the Wilcoxon rank-sum test: (*) P
    Dynabeads Mrna Direct Micro Purification Kit, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 95/100, based on 178 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Thermo Fisher streptavidin poly t oligo attached magnetic beads
    <t>Pre-mRNA</t> features that correlate with the extent of cotranscriptional splicing. ( A ) Cotranscriptional splicing levels differ based on gene position. The box plot shows the distribution of nRNA SPIs for the group of single intron genes and first, internal (second, third, and other), or last introns in multi-intron genes. The box width corresponds to the respective group size. ( B ) mRNA splicing levels differ between introns in different gene positions. Analogous data representation as in A . ( C ) One quarter of introns are significantly less or more spliced than the next downstream (3′) intron in nRNA, as depicted in a volcano plot (three biological replicates). ( D ) 15/42 analyzed gene architecture features correlate significantly with differentially spliced intron pairs (sequence-based in black font and RNA-seq-derived in gray font). The smaller intron position for “low” spliced introns in a pair (first intron – 1, second intron – 2, etc.) is consistent with enrichment of first introns in the “5′ less spliced” group. The median modified Z -score is shown for each feature with significant difference between the “low” and “high” groups, and the respective negative log 10 of the Bonferroni-corrected P -value is given. For two features, no change in the median modified Z -score is visible. The respective feature distribution is presented as a box plot below . Asterisks indicate significance of <t>direct</t> neighbors according to the Wilcoxon rank-sum test: (*) P
    Streptavidin Poly T Oligo Attached Magnetic Beads, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 10 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Thermo Fisher oligo dt pmps from dynabeads mrna direct kit invitrogen
    <t>Pre-mRNA</t> features that correlate with the extent of cotranscriptional splicing. ( A ) Cotranscriptional splicing levels differ based on gene position. The box plot shows the distribution of nRNA SPIs for the group of single intron genes and first, internal (second, third, and other), or last introns in multi-intron genes. The box width corresponds to the respective group size. ( B ) mRNA splicing levels differ between introns in different gene positions. Analogous data representation as in A . ( C ) One quarter of introns are significantly less or more spliced than the next downstream (3′) intron in nRNA, as depicted in a volcano plot (three biological replicates). ( D ) 15/42 analyzed gene architecture features correlate significantly with differentially spliced intron pairs (sequence-based in black font and RNA-seq-derived in gray font). The smaller intron position for “low” spliced introns in a pair (first intron – 1, second intron – 2, etc.) is consistent with enrichment of first introns in the “5′ less spliced” group. The median modified Z -score is shown for each feature with significant difference between the “low” and “high” groups, and the respective negative log 10 of the Bonferroni-corrected P -value is given. For two features, no change in the median modified Z -score is visible. The respective feature distribution is presented as a box plot below . Asterisks indicate significance of <t>direct</t> neighbors according to the Wilcoxon rank-sum test: (*) P
    Oligo Dt Pmps From Dynabeads Mrna Direct Kit Invitrogen, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 78/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Thermo Fisher atp
    <t>Pre-mRNA</t> features that correlate with the extent of cotranscriptional splicing. ( A ) Cotranscriptional splicing levels differ based on gene position. The box plot shows the distribution of nRNA SPIs for the group of single intron genes and first, internal (second, third, and other), or last introns in multi-intron genes. The box width corresponds to the respective group size. ( B ) mRNA splicing levels differ between introns in different gene positions. Analogous data representation as in A . ( C ) One quarter of introns are significantly less or more spliced than the next downstream (3′) intron in nRNA, as depicted in a volcano plot (three biological replicates). ( D ) 15/42 analyzed gene architecture features correlate significantly with differentially spliced intron pairs (sequence-based in black font and RNA-seq-derived in gray font). The smaller intron position for “low” spliced introns in a pair (first intron – 1, second intron – 2, etc.) is consistent with enrichment of first introns in the “5′ less spliced” group. The median modified Z -score is shown for each feature with significant difference between the “low” and “high” groups, and the respective negative log 10 of the Bonferroni-corrected P -value is given. For two features, no change in the median modified Z -score is visible. The respective feature distribution is presented as a box plot below . Asterisks indicate significance of <t>direct</t> neighbors according to the Wilcoxon rank-sum test: (*) P
    Atp, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 97/100, based on 727 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Pre-mRNA features that correlate with the extent of cotranscriptional splicing. ( A ) Cotranscriptional splicing levels differ based on gene position. The box plot shows the distribution of nRNA SPIs for the group of single intron genes and first, internal (second, third, and other), or last introns in multi-intron genes. The box width corresponds to the respective group size. ( B ) mRNA splicing levels differ between introns in different gene positions. Analogous data representation as in A . ( C ) One quarter of introns are significantly less or more spliced than the next downstream (3′) intron in nRNA, as depicted in a volcano plot (three biological replicates). ( D ) 15/42 analyzed gene architecture features correlate significantly with differentially spliced intron pairs (sequence-based in black font and RNA-seq-derived in gray font). The smaller intron position for “low” spliced introns in a pair (first intron – 1, second intron – 2, etc.) is consistent with enrichment of first introns in the “5′ less spliced” group. The median modified Z -score is shown for each feature with significant difference between the “low” and “high” groups, and the respective negative log 10 of the Bonferroni-corrected P -value is given. For two features, no change in the median modified Z -score is visible. The respective feature distribution is presented as a box plot below . Asterisks indicate significance of direct neighbors according to the Wilcoxon rank-sum test: (*) P

    Journal: Genome Research

    Article Title: Long-read sequencing of nascent RNA reveals coupling among RNA processing events

    doi: 10.1101/gr.232025.117

    Figure Lengend Snippet: Pre-mRNA features that correlate with the extent of cotranscriptional splicing. ( A ) Cotranscriptional splicing levels differ based on gene position. The box plot shows the distribution of nRNA SPIs for the group of single intron genes and first, internal (second, third, and other), or last introns in multi-intron genes. The box width corresponds to the respective group size. ( B ) mRNA splicing levels differ between introns in different gene positions. Analogous data representation as in A . ( C ) One quarter of introns are significantly less or more spliced than the next downstream (3′) intron in nRNA, as depicted in a volcano plot (three biological replicates). ( D ) 15/42 analyzed gene architecture features correlate significantly with differentially spliced intron pairs (sequence-based in black font and RNA-seq-derived in gray font). The smaller intron position for “low” spliced introns in a pair (first intron – 1, second intron – 2, etc.) is consistent with enrichment of first introns in the “5′ less spliced” group. The median modified Z -score is shown for each feature with significant difference between the “low” and “high” groups, and the respective negative log 10 of the Bonferroni-corrected P -value is given. For two features, no change in the median modified Z -score is visible. The respective feature distribution is presented as a box plot below . Asterisks indicate significance of direct neighbors according to the Wilcoxon rank-sum test: (*) P

    Article Snippet: Poly(A)− RNA was obtained using oligo(dT)-coated magnetic beads binding to poly(A)+ RNA (Dynabeads mRNA DIRECT Micro Purification kit, Life Technologies). rRNA was removed from ∼5 µg chromatin-associated poly(A)− RNA using the Ribo-Zero Gold rRNA Removal kit (Yeast) from Epicentre/Illumina.

    Techniques: Sequencing, RNA Sequencing Assay, Derivative Assay, Modification