Structured Review

Illumina Inc truseq sbs kit v3 hs
Truseq Sbs Kit V3 Hs, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 215 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/truseq sbs kit v3 hs/product/Illumina Inc
Average 99 stars, based on 215 article reviews
Price from $9.99 to $1999.99
truseq sbs kit v3 hs - by Bioz Stars, 2020-09
99/100 stars

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Sequencing:

Article Title: Direct determination of diploid genome sequences
Article Snippet: .. Sequencing was conducted with an Illumina HiSeq X with 2x150 paired-end reads based on manufacturer's protocols. .. Internal representation of Supernova assembliesAn assembly is first represented as a directed graph in which each edge represents a single strand of DNA sequence.

Article Title: SinoDuplex: An Improved Duplex Sequencing Approach to Detect Low-frequency Variants in Plasma cfDNA Samples
Article Snippet: .. Paired-End 150 sequencing was performed using the HiSeq X Ten platform (Illumina, San Diego, CA) supporting dual indexing with raw sequencing depths over 20,000×. .. Duplex consensus sequence generation The complete computational workflow of the SinoDuplex approach is illustrated in .

Article Title: First de novo whole genome sequencing and assembly of the bar-headed goose
Article Snippet: .. De novo sequencing was conducted with an Illumina HiSeq X Ten platform. ..

Construct:

Article Title: C-KIT Expression Distinguishes Fetal from Postnatal Skeletal Progenitors
Article Snippet: .. PCR products were purified with AMPure XP beads (Agencourt) and quantified with a Qubit dsDNA HS Assay Kit (Thermo Fisher). cDNA libraries were constructed with a Nextera XT DNA Library Preparation Kit (Illumina) and were sequenced on an Illumina HiSeq X Ten instrument in 150-bp paired-end-read mode by Berry Genomics. .. The amplification, cDNA purification, and library construction were performed on the Agilent Bravo automatic liquid-handling platform in the core facility for molecular biology at SIBCB.

Purification:

Article Title: C-KIT Expression Distinguishes Fetal from Postnatal Skeletal Progenitors
Article Snippet: .. PCR products were purified with AMPure XP beads (Agencourt) and quantified with a Qubit dsDNA HS Assay Kit (Thermo Fisher). cDNA libraries were constructed with a Nextera XT DNA Library Preparation Kit (Illumina) and were sequenced on an Illumina HiSeq X Ten instrument in 150-bp paired-end-read mode by Berry Genomics. .. The amplification, cDNA purification, and library construction were performed on the Agilent Bravo automatic liquid-handling platform in the core facility for molecular biology at SIBCB.

cDNA Library Assay:

Article Title: Coordinated mechanisms of leaves and roots in response to drought stress underlying full-length transcriptome profiling in Vicia sativa L
Article Snippet: .. The cDNA library was sequenced with a 100-bp paired-end format using the Illumina HiSeq X Ten, and each sample yielded more than 6 Gb of clean data. ..

Polymerase Chain Reaction:

Article Title: C-KIT Expression Distinguishes Fetal from Postnatal Skeletal Progenitors
Article Snippet: .. PCR products were purified with AMPure XP beads (Agencourt) and quantified with a Qubit dsDNA HS Assay Kit (Thermo Fisher). cDNA libraries were constructed with a Nextera XT DNA Library Preparation Kit (Illumina) and were sequenced on an Illumina HiSeq X Ten instrument in 150-bp paired-end-read mode by Berry Genomics. .. The amplification, cDNA purification, and library construction were performed on the Agilent Bravo automatic liquid-handling platform in the core facility for molecular biology at SIBCB.

ChIP-sequencing:

Article Title: Tandem Directional CTCF Sites Balance Protocadherin Promoter Usage
Article Snippet: .. ChIP-seq libraries were sequenced on a HiSeq X Ten Platform (Illumina). .. Quantitative High-resolution Chromatin Conformation Capture Copy (QHR-4C)The QHR-4C protocol was modified from previously published method [ ].

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  • 86
    Illumina Inc standard illumina kit reagents
    TAg mRNA abundance is high relative to RacPyV VP gene and to total gene transcription in tumors. Total RNA was extracted and filtered for polyadenylated RNA from two RacPyV PCR-positive tumor samples (Rac 10 and Rac 12) and two RacPyV PCR-negative-control olfactory bulbs. RNA was sequenced on an <t>Illumina</t> HiSeq 2000, and pooled quality reads were de novo assembled to produce a transcriptome that identified 13,473 protein-coding genes. Transcripts were quantified using RSEM, and genes from the tumor samples were plotted in order of decreasing TPM. Asterisks and inverted triangles indicate RacPyV TAg and VP genes, respectively.
    Standard Illumina Kit Reagents, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/standard illumina kit reagents/product/Illumina Inc
    Average 86 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    standard illumina kit reagents - by Bioz Stars, 2020-09
    86/100 stars
      Buy from Supplier

    92
    Illumina Inc messenger rna sequencing
    Transcriptional modulation of select antimicrobial peptide genes in 3-dimensional endocervical aggregates. Differences in messenger <t>RNA</t> expression for 3 human β defensins (HBD-1, HBD-2, and HBD-4) and the secreted leukocyte peptidase inhibitor
    Messenger Rna Sequencing, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/messenger rna sequencing/product/Illumina Inc
    Average 92 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    messenger rna sequencing - by Bioz Stars, 2020-09
    92/100 stars
      Buy from Supplier

    93
    Illumina Inc truseq sbs kit v3 hs
    Transcriptional modulation of select antimicrobial peptide genes in 3-dimensional endocervical aggregates. Differences in messenger <t>RNA</t> expression for 3 human β defensins (HBD-1, HBD-2, and HBD-4) and the secreted leukocyte peptidase inhibitor
    Truseq Sbs Kit V3 Hs, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 215 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/truseq sbs kit v3 hs/product/Illumina Inc
    Average 93 stars, based on 215 article reviews
    Price from $9.99 to $1999.99
    truseq sbs kit v3 hs - by Bioz Stars, 2020-09
    93/100 stars
      Buy from Supplier

    99
    Illumina Inc illumina hiseq 2000
    Transcriptional modulation of select antimicrobial peptide genes in 3-dimensional endocervical aggregates. Differences in messenger <t>RNA</t> expression for 3 human β defensins (HBD-1, HBD-2, and HBD-4) and the secreted leukocyte peptidase inhibitor
    Illumina Hiseq 2000, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 7571 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina hiseq 2000/product/Illumina Inc
    Average 99 stars, based on 7571 article reviews
    Price from $9.99 to $1999.99
    illumina hiseq 2000 - by Bioz Stars, 2020-09
    99/100 stars
      Buy from Supplier

    Image Search Results


    TAg mRNA abundance is high relative to RacPyV VP gene and to total gene transcription in tumors. Total RNA was extracted and filtered for polyadenylated RNA from two RacPyV PCR-positive tumor samples (Rac 10 and Rac 12) and two RacPyV PCR-negative-control olfactory bulbs. RNA was sequenced on an Illumina HiSeq 2000, and pooled quality reads were de novo assembled to produce a transcriptome that identified 13,473 protein-coding genes. Transcripts were quantified using RSEM, and genes from the tumor samples were plotted in order of decreasing TPM. Asterisks and inverted triangles indicate RacPyV TAg and VP genes, respectively.

    Journal: Journal of Virology

    Article Title: The Raccoon Polyomavirus Genome and Tumor Antigen Transcription Are Stable and Abundant in Neuroglial Tumors

    doi: 10.1128/JVI.01912-14

    Figure Lengend Snippet: TAg mRNA abundance is high relative to RacPyV VP gene and to total gene transcription in tumors. Total RNA was extracted and filtered for polyadenylated RNA from two RacPyV PCR-positive tumor samples (Rac 10 and Rac 12) and two RacPyV PCR-negative-control olfactory bulbs. RNA was sequenced on an Illumina HiSeq 2000, and pooled quality reads were de novo assembled to produce a transcriptome that identified 13,473 protein-coding genes. Transcripts were quantified using RSEM, and genes from the tumor samples were plotted in order of decreasing TPM. Asterisks and inverted triangles indicate RacPyV TAg and VP genes, respectively.

    Article Snippet: Indexed libraries were pooled and loaded on the cBot for cluster generation on TruSeq paired-end flow cells, and paired-end sequencing (2 × 100 bp, paired-end; 4 libraries/lane) was performed with an Illumina HiSeq 2000 sequencing system (BGI@UC Davis Joint Genome Center) using standard Illumina kit reagents (TruSeq SBS kit v3-HS).

    Techniques: Polymerase Chain Reaction, Negative Control

    Transcriptional modulation of select antimicrobial peptide genes in 3-dimensional endocervical aggregates. Differences in messenger RNA expression for 3 human β defensins (HBD-1, HBD-2, and HBD-4) and the secreted leukocyte peptidase inhibitor

    Journal: The Journal of Infectious Diseases

    Article Title: Mycoplasmagenitalium Infection Activates Cellular Host Defense and Inflammation Pathways in a 3-Dimensional Human Endocervical Epithelial Cell Model

    doi: 10.1093/infdis/jit101

    Figure Lengend Snippet: Transcriptional modulation of select antimicrobial peptide genes in 3-dimensional endocervical aggregates. Differences in messenger RNA expression for 3 human β defensins (HBD-1, HBD-2, and HBD-4) and the secreted leukocyte peptidase inhibitor

    Article Snippet: Equal 1-μg quantities of RNA were pooled from each experiment and used for library preparation (truSeq RNA Sample Prep Kit v2), cluster generation (TruSeq Single Read Cluster generation Kit v3-cBot-HS), and messenger RNA sequencing (mRNA-Seq; TruSeq SBS Kit v3-HS) on the Illumina HiSeq 2000 (Illumina, San Diego, CA). mRNA-Seq was conducted by SeqWright according to the manufacturer's protocol.

    Techniques: RNA Expression