ncbi t asperellum cbs 433 97  (ATCC)


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    ATCC ncbi t asperellum cbs 433 97
    Trichoderma genomes statistics
    Ncbi T Asperellum Cbs 433 97, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "Telomere-to-telomere genome assembly of asparaginase-producing Trichoderma simmonsii"

    Article Title: Telomere-to-telomere genome assembly of asparaginase-producing Trichoderma simmonsii

    Journal: BMC Genomics

    doi: 10.1186/s12864-021-08162-4


    Figure Legend Snippet: Trichoderma genomes statistics

    Techniques Used:

    ncbi t asperellum cbs 433 97  (ATCC)


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    ATCC ncbi t asperellum cbs 433 97
    Trichoderma genomes statistics
    Ncbi T Asperellum Cbs 433 97, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "Telomere-to-telomere genome assembly of asparaginase-producing Trichoderma simmonsii"

    Article Title: Telomere-to-telomere genome assembly of asparaginase-producing Trichoderma simmonsii

    Journal: BMC Genomics

    doi: 10.1186/s12864-021-08162-4


    Figure Legend Snippet: Trichoderma genomes statistics

    Techniques Used:

    tenacibaculum maritimum ncimb  (ATCC)


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    ATCC tenacibaculum maritimum ncimb
    Tenacibaculum Maritimum Ncimb, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    tenacibaculum maritimum cect  (ATCC)


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    ATCC tenacibaculum maritimum cect
    Tenacibaculum Maritimum Cect, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    tenacibaculum maritimum  (ATCC)


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    ATCC tenacibaculum maritimum
    Tenacibaculum Maritimum, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    t asperellum cbs 433 97  (ATCC)


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    ATCC t asperellum cbs 433 97
    T Asperellum Cbs 433 97, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    t maritimum type strain  (ATCC)


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    ATCC t maritimum type strain
    Circular representation of the Tenacibaculum <t>maritimum</t> NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).
    T Maritimum Type Strain, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms"

    Article Title: The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

    Journal: Frontiers in Microbiology

    doi: 10.3389/fmicb.2017.01542

    Circular representation of the Tenacibaculum maritimum NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).
    Figure Legend Snippet: Circular representation of the Tenacibaculum maritimum NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).

    Techniques Used:

    Tenacibaculum maritimum sphingomyelinase activity. Fluorescence measurement (arbitrary units) following incubation of 1.3 ng (blue line) of recombinant protein with Amplex Red Sphingomyelinase assay kit. The control conditions were as follows: negative control, 1.3 ng of boiled recombinant protein (green line); positive control, the purified sphingomyelinase from Bacillus cereus provided by the manufacturer (red line). Results correspond to the mean of triplicates and SDs are included.
    Figure Legend Snippet: Tenacibaculum maritimum sphingomyelinase activity. Fluorescence measurement (arbitrary units) following incubation of 1.3 ng (blue line) of recombinant protein with Amplex Red Sphingomyelinase assay kit. The control conditions were as follows: negative control, 1.3 ng of boiled recombinant protein (green line); positive control, the purified sphingomyelinase from Bacillus cereus provided by the manufacturer (red line). Results correspond to the mean of triplicates and SDs are included.

    Techniques Used: Activity Assay, Fluorescence, Incubation, Recombinant, Negative Control, Positive Control, Purification

    Degradation of chondroitin sulfates by T. maritimum . (A) Colonies of T. maritimum NCIMB 2154 T , T. discolor LL04 11.1.1 T , T. jejuense KCTC 22618 T , and T. soleae LL04 12.1.7 T on marine agar 2216 supplemented with 0.2% of chondroitin sulfates A (left) and C (right). (B) Activity of the recombinant protein Tm CslA PL8 on chondroitin A (blue line) and chondroitin C (red line). The release of unsaturated oligosaccharides was monitored by spectrophotometry at 232 nm using biological triplicates. The two control conditions (green lines) correspond to the same reaction mixture with a boiled Tm CslA PL8 . For the clarity of the graphic, the error bars are only indicated every 10 s.
    Figure Legend Snippet: Degradation of chondroitin sulfates by T. maritimum . (A) Colonies of T. maritimum NCIMB 2154 T , T. discolor LL04 11.1.1 T , T. jejuense KCTC 22618 T , and T. soleae LL04 12.1.7 T on marine agar 2216 supplemented with 0.2% of chondroitin sulfates A (left) and C (right). (B) Activity of the recombinant protein Tm CslA PL8 on chondroitin A (blue line) and chondroitin C (red line). The release of unsaturated oligosaccharides was monitored by spectrophotometry at 232 nm using biological triplicates. The two control conditions (green lines) correspond to the same reaction mixture with a boiled Tm CslA PL8 . For the clarity of the graphic, the error bars are only indicated every 10 s.

    Techniques Used: Activity Assay, Recombinant, Spectrophotometry

    Tenacibaculum maritimum sialidase activity. Fluorescence measurement (arbitrary units) following incubation of T. maritimum NCIMB 2154 T (red line), T. discolor LL04 11.1.1 T (blue line), T. jejuense KCTC 22618 T (green line), and T. soleae LL04 12.1.7 T (purple line) cells with the fluorogenic substrate MUAN. Results correspond to the mean of triplicates and SDs are shown.
    Figure Legend Snippet: Tenacibaculum maritimum sialidase activity. Fluorescence measurement (arbitrary units) following incubation of T. maritimum NCIMB 2154 T (red line), T. discolor LL04 11.1.1 T (blue line), T. jejuense KCTC 22618 T (green line), and T. soleae LL04 12.1.7 T (purple line) cells with the fluorogenic substrate MUAN. Results correspond to the mean of triplicates and SDs are shown.

    Techniques Used: Activity Assay, Fluorescence, Incubation

    Summary of the predicted virulence-associated genes identified in this study in the genome of T.  maritimum  NCIMB 2154 T .
    Figure Legend Snippet: Summary of the predicted virulence-associated genes identified in this study in the genome of T. maritimum NCIMB 2154 T .

    Techniques Used: Activity Assay

    tenacibaculum maritimum atcc 43398t  (ATCC)


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    ATCC tenacibaculum maritimum atcc 43398t
    Tenacibaculum Maritimum Atcc 43398t, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    lutibacter crassostreae tyo 8t kp662555 tenacibaculum maritimum atcc 43398t  (ATCC)


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    ATCC lutibacter crassostreae tyo 8t kp662555 tenacibaculum maritimum atcc 43398t
    Lutibacter Crassostreae Tyo 8t Kp662555 Tenacibaculum Maritimum Atcc 43398t, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    dsm 43397 x80607  (ATCC)


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    ATCC dsm 43397 x80607
    Dsm 43397 X80607, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    tenacibaculum maritimum  (ATCC)


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    ATCC tenacibaculum maritimum
    Tenacibaculum Maritimum, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC ncbi t asperellum cbs 433 97
    Trichoderma genomes statistics
    Ncbi T Asperellum Cbs 433 97, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC tenacibaculum maritimum ncimb
    Trichoderma genomes statistics
    Tenacibaculum Maritimum Ncimb, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC tenacibaculum maritimum
    Trichoderma genomes statistics
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    ATCC t asperellum cbs 433 97
    Trichoderma genomes statistics
    T Asperellum Cbs 433 97, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC t maritimum type strain
    Circular representation of the Tenacibaculum <t>maritimum</t> NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).
    T Maritimum Type Strain, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC tenacibaculum maritimum atcc 43398t
    Circular representation of the Tenacibaculum <t>maritimum</t> NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).
    Tenacibaculum Maritimum Atcc 43398t, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC lutibacter crassostreae tyo 8t kp662555 tenacibaculum maritimum atcc 43398t
    Circular representation of the Tenacibaculum <t>maritimum</t> NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).
    Lutibacter Crassostreae Tyo 8t Kp662555 Tenacibaculum Maritimum Atcc 43398t, supplied by ATCC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC dsm 43397 x80607
    Circular representation of the Tenacibaculum <t>maritimum</t> NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).
    Dsm 43397 X80607, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Journal: BMC Genomics

    Article Title: Telomere-to-telomere genome assembly of asparaginase-producing Trichoderma simmonsii

    doi: 10.1186/s12864-021-08162-4

    Figure Lengend Snippet: Trichoderma genomes statistics

    Article Snippet: To analyze the genomic similarities and differences between T. simmonsii GH-Sj1 and related genomes, we collected 11 previously annotated Trichoderma genomes from NCBI: T. asperellum CBS 433.97, T. atroviride IMI 206040, T. citrinoviride TUCIM 6016, T. gamsii T6085, T. guizhouense NJAU 4742, T. harzianum CBS 226.95, T. lentiforme CFAM-422, T. longibrachiatum ATCC 18648, T. parareesei CBS 125925, T. reesei QM6a, and T. virens Gv29–8.

    Techniques:

    Circular representation of the Tenacibaculum maritimum NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).

    Journal: Frontiers in Microbiology

    Article Title: The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

    doi: 10.3389/fmicb.2017.01542

    Figure Lengend Snippet: Circular representation of the Tenacibaculum maritimum NCIMB 2154 T genome. Circles display (from the outside): (1) GC percent deviation (GC window – mean GC) in a 1,000-bp window. (2) Predicted CDSs transcribed in the clockwise direction. (3) Predicted CDSs transcribed in the counterclockwise direction. Genes displayed in (2) and (3) are color-coded according to the following categories: red and blue, MaGe validated annotations; purple, primary/automatic annotations. (4) GC skew (G + C/G – C) in a 1,000-bp window. (5) rRNA (blue), tRNA (green), miscellaneous other RNA (orange), transposable elements (pink), and pseudogenes (gray).

    Article Snippet: Several batches of the T. maritimum type strain (i.e., NCIMB 2154 T , ATCC 43398 T , CIP 103528 T , and DSM 17995 T ), Tenacibaculum discolor LL04 11.1.1 T , Tenacibaculum jejuense CNURIC013 T , and Tenacibaculum soleae LL04 12.1.7 T were routinely grown in marine broth and agar 2216 (Difco) at 28°C and 170 rpm.

    Techniques:

    Tenacibaculum maritimum sphingomyelinase activity. Fluorescence measurement (arbitrary units) following incubation of 1.3 ng (blue line) of recombinant protein with Amplex Red Sphingomyelinase assay kit. The control conditions were as follows: negative control, 1.3 ng of boiled recombinant protein (green line); positive control, the purified sphingomyelinase from Bacillus cereus provided by the manufacturer (red line). Results correspond to the mean of triplicates and SDs are included.

    Journal: Frontiers in Microbiology

    Article Title: The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

    doi: 10.3389/fmicb.2017.01542

    Figure Lengend Snippet: Tenacibaculum maritimum sphingomyelinase activity. Fluorescence measurement (arbitrary units) following incubation of 1.3 ng (blue line) of recombinant protein with Amplex Red Sphingomyelinase assay kit. The control conditions were as follows: negative control, 1.3 ng of boiled recombinant protein (green line); positive control, the purified sphingomyelinase from Bacillus cereus provided by the manufacturer (red line). Results correspond to the mean of triplicates and SDs are included.

    Article Snippet: Several batches of the T. maritimum type strain (i.e., NCIMB 2154 T , ATCC 43398 T , CIP 103528 T , and DSM 17995 T ), Tenacibaculum discolor LL04 11.1.1 T , Tenacibaculum jejuense CNURIC013 T , and Tenacibaculum soleae LL04 12.1.7 T were routinely grown in marine broth and agar 2216 (Difco) at 28°C and 170 rpm.

    Techniques: Activity Assay, Fluorescence, Incubation, Recombinant, Negative Control, Positive Control, Purification

    Degradation of chondroitin sulfates by T. maritimum . (A) Colonies of T. maritimum NCIMB 2154 T , T. discolor LL04 11.1.1 T , T. jejuense KCTC 22618 T , and T. soleae LL04 12.1.7 T on marine agar 2216 supplemented with 0.2% of chondroitin sulfates A (left) and C (right). (B) Activity of the recombinant protein Tm CslA PL8 on chondroitin A (blue line) and chondroitin C (red line). The release of unsaturated oligosaccharides was monitored by spectrophotometry at 232 nm using biological triplicates. The two control conditions (green lines) correspond to the same reaction mixture with a boiled Tm CslA PL8 . For the clarity of the graphic, the error bars are only indicated every 10 s.

    Journal: Frontiers in Microbiology

    Article Title: The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

    doi: 10.3389/fmicb.2017.01542

    Figure Lengend Snippet: Degradation of chondroitin sulfates by T. maritimum . (A) Colonies of T. maritimum NCIMB 2154 T , T. discolor LL04 11.1.1 T , T. jejuense KCTC 22618 T , and T. soleae LL04 12.1.7 T on marine agar 2216 supplemented with 0.2% of chondroitin sulfates A (left) and C (right). (B) Activity of the recombinant protein Tm CslA PL8 on chondroitin A (blue line) and chondroitin C (red line). The release of unsaturated oligosaccharides was monitored by spectrophotometry at 232 nm using biological triplicates. The two control conditions (green lines) correspond to the same reaction mixture with a boiled Tm CslA PL8 . For the clarity of the graphic, the error bars are only indicated every 10 s.

    Article Snippet: Several batches of the T. maritimum type strain (i.e., NCIMB 2154 T , ATCC 43398 T , CIP 103528 T , and DSM 17995 T ), Tenacibaculum discolor LL04 11.1.1 T , Tenacibaculum jejuense CNURIC013 T , and Tenacibaculum soleae LL04 12.1.7 T were routinely grown in marine broth and agar 2216 (Difco) at 28°C and 170 rpm.

    Techniques: Activity Assay, Recombinant, Spectrophotometry

    Tenacibaculum maritimum sialidase activity. Fluorescence measurement (arbitrary units) following incubation of T. maritimum NCIMB 2154 T (red line), T. discolor LL04 11.1.1 T (blue line), T. jejuense KCTC 22618 T (green line), and T. soleae LL04 12.1.7 T (purple line) cells with the fluorogenic substrate MUAN. Results correspond to the mean of triplicates and SDs are shown.

    Journal: Frontiers in Microbiology

    Article Title: The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

    doi: 10.3389/fmicb.2017.01542

    Figure Lengend Snippet: Tenacibaculum maritimum sialidase activity. Fluorescence measurement (arbitrary units) following incubation of T. maritimum NCIMB 2154 T (red line), T. discolor LL04 11.1.1 T (blue line), T. jejuense KCTC 22618 T (green line), and T. soleae LL04 12.1.7 T (purple line) cells with the fluorogenic substrate MUAN. Results correspond to the mean of triplicates and SDs are shown.

    Article Snippet: Several batches of the T. maritimum type strain (i.e., NCIMB 2154 T , ATCC 43398 T , CIP 103528 T , and DSM 17995 T ), Tenacibaculum discolor LL04 11.1.1 T , Tenacibaculum jejuense CNURIC013 T , and Tenacibaculum soleae LL04 12.1.7 T were routinely grown in marine broth and agar 2216 (Difco) at 28°C and 170 rpm.

    Techniques: Activity Assay, Fluorescence, Incubation

    Summary of the predicted virulence-associated genes identified in this study in the genome of T.  maritimum  NCIMB 2154 T .

    Journal: Frontiers in Microbiology

    Article Title: The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

    doi: 10.3389/fmicb.2017.01542

    Figure Lengend Snippet: Summary of the predicted virulence-associated genes identified in this study in the genome of T. maritimum NCIMB 2154 T .

    Article Snippet: Several batches of the T. maritimum type strain (i.e., NCIMB 2154 T , ATCC 43398 T , CIP 103528 T , and DSM 17995 T ), Tenacibaculum discolor LL04 11.1.1 T , Tenacibaculum jejuense CNURIC013 T , and Tenacibaculum soleae LL04 12.1.7 T were routinely grown in marine broth and agar 2216 (Difco) at 28°C and 170 rpm.

    Techniques: Activity Assay