t putidum strains  (ATCC)


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    Name:
    Treponema putidum OMZ 758 CIP 108088 JZC3
    Description:

    Catalog Number:
    700334
    Price:
    None
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    Structured Review

    ATCC t putidum strains
    ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. <t>putidum</t> (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.

    https://www.bioz.com/result/t putidum strains/product/ATCC
    Average 93 stars, based on 5 article reviews
    Price from $9.99 to $1999.99
    t putidum strains - by Bioz Stars, 2020-08
    93/100 stars

    Related Products / Commonly Used Together

    atcc 700334t strain

    Images

    1) Product Images from "Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains"

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains

    Journal: Applied and Environmental Microbiology

    doi: 10.1128/AEM.02499-16

    ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. putidum (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.
    Figure Legend Snippet: ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. putidum (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.

    Techniques Used: Generated, IA

    2) Product Images from "Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains"

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains

    Journal: Applied and Environmental Microbiology

    doi: 10.1128/AEM.02499-16

    ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. putidum (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.
    Figure Legend Snippet: ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. putidum (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.

    Techniques Used: Generated, IA

    Related Articles

    Sequencing:

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains
    Article Snippet: .. Complete genome sequence of the oral spirochete bacterium Treponema putidum strain OMZ 758T (ATCC 700334T) . ..

    Article Title: Complete Genome Sequence of the Oral Spirochete Bacterium Treponema putidum Strain OMZ 758T (ATCC 700334T)
    Article Snippet: .. Complete genome sequence of the oral spirochete bacterium Treponema putidum strain OMZ 758T (ATCC 700334T ). ..

    Article Title: 16S rRNA amplicon sequencing reveals a polymicrobial nature of complicated claw horn disruption lesions and interdigital phlegmon in dairy cattle
    Article Snippet: .. Treponema phylotype 18 was shown to be sharing 95% sequence identity with recognized Treponema species (T . putidum ATCC 700334, T . pedis T3552B, and T . denticola ATCC 35405) . ..

    Article Title: 16S rRNA amplicon sequencing reveals a polymicrobial nature of complicated claw horn disruption lesions and interdigital phlegmon in dairy cattle
    Article Snippet: .. Treponema phylotype 18 was shown to be sharing 95% sequence identity with recognized Treponema species ( T . putidum ATCC 700334, T . pedis T3552B, and T . denticola ATCC 35405) . ..

    Article Title: Targeting the Treponemal Microbiome of Digital Dermatitis Infections by High-Resolution Phylogenetic Analyses and Comparison with Fluorescent In Situ Hybridization
    Article Snippet: .. This sequence shared only 95% sequence identity with recognized Treponema species ( T. putidum ATCC 700334, T. pedis T3552B, and T. denticola ATCC 35405). .. Treponema clones 9T-42 and 517 were both part of the human oral microbiome, and clone 9T-42 originated from a root canal area that displayed chronic apical periodontitis ( , ).

    Article Title: Comparative Genomics of the Transportome of Ten Treponema species
    Article Snippet: .. Complete Genome Sequence of the Oral Spirochete Bacterium Treponema putidum Strain OMZ 758T (ATCC 700334T) . ..

    Isolation:

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains
    Article Snippet: .. For example, several of the T. putidum strains isolated from Switzerland (ATCC 700334 and OMZ 844) and China (OMZ 848, OMZ 835, and OMZ 846) cluster together. .. The two Swiss Treponema sp. IB strains (OMZ 805 and ATCC 700767) cluster together.

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    ATCC t putidum strains
    ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. <t>putidum</t> (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.
    T Putidum Strains, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 5 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/t putidum strains/product/ATCC
    Average 92 stars, based on 5 article reviews
    Price from $9.99 to $1999.99
    t putidum strains - by Bioz Stars, 2020-08
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    ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. putidum (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.

    Journal: Applied and Environmental Microbiology

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains

    doi: 10.1128/AEM.02499-16

    Figure Lengend Snippet: ML phylogenetic tree of oral treponeme 16S rRNA genes. The maximum clade credibility tree topology is supported by bootstrapping for 1,000 replicates (first number) and Bayesian posterior probabilities (second number) separated with a forward slash “/” symbol in percentages; only values over 40% are shown beside the branch nodes. Sequences generated in this study are in boldface type. A scale bar indicates the nucleotide changes per position. Excessively long branches were trimmed in proportion to the scale bar (indicated by “//” on the branches). The respective oral treponeme species (phylogroups) are indicated with different color shadings. The corresponding HOT numbers are also indicated as follows: T. denticola (HOT 584), dark blue; T. putidum (HOT 743), red; T. vincentii (HOT 029), light green; Treponema sp. IA (HOT 231), purple; Treponema sp. IB (HOT 667), light blue; and Treponema sp. IC (HOT 231), orange.

    Article Snippet: This is consistent with a previous report ( ) which stated that this strain had a notably different phenotype from the other T. denticola and T. putidum strains analyzed.

    Techniques: Generated, IA