t denticola atcc 35405 ptrb protease homologue  (ATCC)


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    Name:
    Treponema denticola
    Description:

    Catalog Number:
    35405
    Price:
    None
    Applications:
    Produces major surface proteinProduces methyl-accepting chemotaxis proteinProduces prolyl aminopeptidase proline iminopeptidase
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    Structured Review

    ATCC t denticola atcc 35405 ptrb protease homologue
    Circular representation of the T. pedis T A4 genome and complete genome alignment with T. <t>denticola</t> . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola <t>ATCC</t> 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.

    https://www.bioz.com/result/t denticola atcc 35405 ptrb protease homologue/product/ATCC
    Average 99 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    t denticola atcc 35405 ptrb protease homologue - by Bioz Stars, 2020-04
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    Images

    1) Product Images from "Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola"

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola

    Journal: PLoS ONE

    doi: 10.1371/journal.pone.0071281

    Circular representation of the T. pedis T A4 genome and complete genome alignment with T. denticola . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola ATCC 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.
    Figure Legend Snippet: Circular representation of the T. pedis T A4 genome and complete genome alignment with T. denticola . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola ATCC 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.

    Techniques Used:

    Related Articles

    Centrifugation:

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: Protein expression was induced by the addition of isopropyl-β- d -thiogalactopyranoside (IPTG) to 0.2 mM, and the culture was further incubated for 3 h. Cells were collected by centrifugation for 10 min at 4,000 rpm and lysed by suspension in 1× Laemmli sample buffer and repeated passage through a 26-gauge needle. .. Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ).

    Mass Spectrometry:

    Article Title: Major Membrane Protein TDE2508 Regulates Adhesive Potency in Treponema denticola
    Article Snippet: Analysis of Major Membrane-Associated Proteins in T . denticola We analyzed the major proteins of the envelope (membrane) fraction in T . denticola ATCC 35405. .. The major proteins (i.e., intense bands containing more than 100 ng of protein or 1% of total protein) were analyzed by mass spectrometry, and 16 proteins were identified ( and ).

    Synthesized:

    Article Title: Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
    Article Snippet: DNA microarray analysis T. denticola ATCC 35405 and KT-3 were cultured as described above for 2 days. .. DNase treatment was carried out using a TURBO DNA-free kit Life Technologies). cDNA was synthesized using a SuperScript Double-Stranded cDNA Synthesis kit (Invitrogen).

    Blocking Assay:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: .. Receptor blocking experiments using rMsp from T. denticola ATCC 35405 confirmed that the N-terminal region of fibronectin is the only region targeted in vitro by T. denticola ATCC 35405. ..

    Microarray:

    Article Title: Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
    Article Snippet: .. DNA microarray analysis T. denticola ATCC 35405 and KT-3 were cultured as described above for 2 days. .. To investigate the relation between inactivation of tepA 2 and increase of chloramphenicol resistance, exponentially growing cells (OD660 ~ 0.2) were incubated with chloramphenicol (1 μg/ml) for 4 h. The cells were harvested immediately after chloramphenicol treatment and total RNA was extracted using Trizol (Life Technologies).

    Incubation:

    Article Title: Major Membrane Protein TDE2508 Regulates Adhesive Potency in Treponema denticola
    Article Snippet: The plates were anaerobically incubated at 37°C, and the turbid plaque was monitored for 2 weeks as an index of bacterial motility. .. For the autoaggregation test, T . denticola ATCC 35405 (open circle) and tde2508 -deletion mutant (open triangle) were set in a cuvette, and the optical density at 600 nm (OD600) was monitored.

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: Protein expression was induced by the addition of isopropyl-β- d -thiogalactopyranoside (IPTG) to 0.2 mM, and the culture was further incubated for 3 h. Cells were collected by centrifugation for 10 min at 4,000 rpm and lysed by suspension in 1× Laemmli sample buffer and repeated passage through a 26-gauge needle. .. Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ).

    Article Title: Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
    Article Snippet: DNA microarray analysis T. denticola ATCC 35405 and KT-3 were cultured as described above for 2 days. .. To investigate the relation between inactivation of tepA 2 and increase of chloramphenicol resistance, exponentially growing cells (OD660 ~ 0.2) were incubated with chloramphenicol (1 μg/ml) for 4 h. The cells were harvested immediately after chloramphenicol treatment and total RNA was extracted using Trizol (Life Technologies).

    Activity Assay:

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola
    Article Snippet: These include the dentilisin operon in T. denticola , which is believed to contribute to periodontal disease by interfering with host signaling pathways and degrade host-cell matrix proteins by its proteolytic activity , . .. In T. denticola ATCC 35405, this operon consists of the components named PrcB, PrcA and PrtP .

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: Strains of Treponema species that are deficient in CTLP activity generally show lower levels of binding to fibronectin , even though they appear to express Msp-like proteins. .. The Msp proteins from T. denticola ATCC 35405 and ATCC 35520 show high sequence identity (except for the central V region; Fig. ), whereas the Msp polypeptide from T. denticola OTK is significantly different and antigenically distinct ( ).

    Expressing:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: In this study, recombinant Msp and defined fragments were successfully purified from E. coli , with no deleterious effects on the expression host and with minimal degradation of recombinant polypeptides. .. Receptor blocking experiments using rMsp from T. denticola ATCC 35405 confirmed that the N-terminal region of fibronectin is the only region targeted in vitro by T. denticola ATCC 35405.

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: Paragraph title: Expression of recombinant proteins in E. coli . ... Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ).

    Article Title: Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
    Article Snippet: DNA microarray analysis T. denticola ATCC 35405 and KT-3 were cultured as described above for 2 days. .. DNA microarray gene expression analysis was carried out using Roche NimbleGen custom arrays (2006-07-27_TI243275_60mer; Roche, Indianapolis, IN) according to the standard NimbleGen procedure (NimbleGen arrays user’s guide: gene expression analysis, v6.0).

    Western Blot:

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: .. Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ). .. SDS-PAGE and Western immunoblotting were performed as described previously ( ).

    Cell Culture:

    Article Title: Characterization of a potential ABC-type bacteriocin exporter protein from Treponema denticola
    Article Snippet: .. DNA microarray analysis T. denticola ATCC 35405 and KT-3 were cultured as described above for 2 days. .. To investigate the relation between inactivation of tepA 2 and increase of chloramphenicol resistance, exponentially growing cells (OD660 ~ 0.2) were incubated with chloramphenicol (1 μg/ml) for 4 h. The cells were harvested immediately after chloramphenicol treatment and total RNA was extracted using Trizol (Life Technologies).

    Sequencing:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: .. The msp gene of T. denticola ATCC 35405 may be divided into three coding regions on the basis of sequence conservation with msp of T. denticola ATCC 33520 (Fig. ). .. These comprise an N-terminal region of 609 bp; a central, sequence variable (V) region of approximately 200 bp; and a C-terminal region of about 800 bp (Fig. ).

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: .. The Msp proteins from T. denticola ATCC 35405 and ATCC 35520 show high sequence identity (except for the central V region; Fig. ), whereas the Msp polypeptide from T. denticola OTK is significantly different and antigenically distinct ( ). .. The predicted sequence of Msp from T. denticola GM-1 is > 95% identical to that of Msp from strain OTK (A. M. Edwards, unpublished data).

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola
    Article Snippet: Annotation of T. pedis T A4 Coding DNA sequence (CDS) positions in T. pedis T A4 were predicted with Glimmer 3 . .. Positions of the ribosomal subunit (rRNA) genes 16S, 23S and 5S were identified by pair-wise nucleotide comparisons with corresponding genes in T. denticola ATCC 35405.

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola
    Article Snippet: To gain insight into the genetic composition of T. pedis and to identify potential virulence factors, we determined the complete genome sequence of the T. pedis strain T A4, isolated from a case of pig ear necrosis. .. The wide set of T. pedis genes was compared to genes in T. denticola ATCC 35405 complemented with genes from 12 additional T. denticola draft WGS assemblies.

    Binding Assay:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: These fibronectin interaction properties of Msp are similar to those of T. denticola cells and to those of T. vincentii and related Treponema species ( ). rMsp was found to block, by up to 50%, binding of T. denticola ATCC 35405 cells to fibronectin, an observation that conflicts with a previous report showing that full-length recombinant Msp did not significantly affect adhesion to fibronectin ( ). .. Receptor blocking experiments using rMsp from T. denticola ATCC 35405 confirmed that the N-terminal region of fibronectin is the only region targeted in vitro by T. denticola ATCC 35405.

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: Paragraph title: Binding regions of Msp to fibronectin and other host proteins. ... The msp gene of T. denticola ATCC 35405 may be divided into three coding regions on the basis of sequence conservation with msp of T. denticola ATCC 33520 (Fig. ).

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: Strains of T. socranskii and T. pectinovorum have been shown to produce 43-kDa Msp-like proteins , but their binding properties and their relationship to other Msp proteins from T. denticola are unknown. .. The Msp proteins from T. denticola ATCC 35405 and ATCC 35520 show high sequence identity (except for the central V region; Fig. ), whereas the Msp polypeptide from T. denticola OTK is significantly different and antigenically distinct ( ).

    In Vivo:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: Thus, it is likely that CTLP ( ) or other components of the Msp complex may modulate fibronectin binding functions in vivo. .. The Msp proteins from T. denticola ATCC 35405 and ATCC 35520 show high sequence identity (except for the central V region; Fig. ), whereas the Msp polypeptide from T. denticola OTK is significantly different and antigenically distinct ( ).

    Mutagenesis:

    Article Title: Major Membrane Protein TDE2508 Regulates Adhesive Potency in Treponema denticola
    Article Snippet: .. For the autoaggregation test, T . denticola ATCC 35405 (open circle) and tde2508 -deletion mutant (open triangle) were set in a cuvette, and the optical density at 600 nm (OD600) was monitored. .. For the coaggregation test, T . denticola ATCC 35405 (closed circle) and tde2508 -deletion mutant (closed triangle) were mixed with P . gingivalis , and the OD600 was monitored.

    Article Title: Motility and Chemotaxis in Tissue Penetration of Oral Epithelial Cell Layers by Treponema denticola
    Article Snippet: .. Wild-type T. denticola ATCC 35405 was found to penetrate the tissue layers effectively, whereas a nonmotile mutant was unable to overcome the tissue barrier. .. Interestingly, the chemotaxis mutants also showed impaired tissue penetration.

    Isolation:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: The Msp proteins from T. denticola ATCC 35405 and ATCC 35520 show high sequence identity (except for the central V region; Fig. ), whereas the Msp polypeptide from T. denticola OTK is significantly different and antigenically distinct ( ). .. In contrast, T. vincentii and some related Treponema species isolated from animal infections show lower levels of binding to fibronectin than T. denticola ( ).

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola
    Article Snippet: To gain insight into the genetic composition of T. pedis and to identify potential virulence factors, we determined the complete genome sequence of the T. pedis strain T A4, isolated from a case of pig ear necrosis. .. The wide set of T. pedis genes was compared to genes in T. denticola ATCC 35405 complemented with genes from 12 additional T. denticola draft WGS assemblies.

    Purification:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: In this study, recombinant Msp and defined fragments were successfully purified from E. coli , with no deleterious effects on the expression host and with minimal degradation of recombinant polypeptides. .. Receptor blocking experiments using rMsp from T. denticola ATCC 35405 confirmed that the N-terminal region of fibronectin is the only region targeted in vitro by T. denticola ATCC 35405.

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: The msp gene of T. denticola ATCC 35405 may be divided into three coding regions on the basis of sequence conservation with msp of T. denticola ATCC 33520 (Fig. ). .. To determine if these regions encoded Msp fragments with substrate binding properties, recombinant polypeptides corresponding to sequences within the N-terminal (rN-Msp, 14 to 202 aa residues), variable (rV-Msp, 203 to 259 aa residues), and C-terminal (rC-Msp, 272 to 543 aa residues) regions were purified.

    Construct:

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: Plasmid DNAs carrying various msp constructs were introduced into the E. coli expression strain C41/pLysS. .. Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ).

    SDS Page:

    Article Title: Major Membrane Protein TDE2508 Regulates Adhesive Potency in Treponema denticola
    Article Snippet: Analysis of Major Membrane-Associated Proteins in T . denticola We analyzed the major proteins of the envelope (membrane) fraction in T . denticola ATCC 35405. .. Ten micrograms of the fraction was subjected to SDS-PAGE, then stained with CBB.

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: The msp gene of T. denticola ATCC 35405 may be divided into three coding regions on the basis of sequence conservation with msp of T. denticola ATCC 33520 (Fig. ). .. We were unable to express a stable recombinant polypeptide comprising the entire V region (203 to 271 aa residues). rMsp and rC-Msp migrated on SDS-PAGE according to their predicted molecular masses of 53 kDa and 31.7 kDa, respectively (Fig. , lanes 1 and 4).

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: .. Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ). .. SDS-PAGE and Western immunoblotting were performed as described previously ( ).

    Plasmid Preparation:

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: Plasmid DNAs carrying various msp constructs were introduced into the E. coli expression strain C41/pLysS. .. Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ).

    Functional Assay:

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola
    Article Snippet: .. A distribution of different functional categories for the CDSs in T. pedis T A4 and T. denticola ATCC 35405 were made by performing a BLASTP search in the COG-database (clusters of orthologous groups) . ..

    Recombinant:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: These fibronectin interaction properties of Msp are similar to those of T. denticola cells and to those of T. vincentii and related Treponema species ( ). rMsp was found to block, by up to 50%, binding of T. denticola ATCC 35405 cells to fibronectin, an observation that conflicts with a previous report showing that full-length recombinant Msp did not significantly affect adhesion to fibronectin ( ). .. Receptor blocking experiments using rMsp from T. denticola ATCC 35405 confirmed that the N-terminal region of fibronectin is the only region targeted in vitro by T. denticola ATCC 35405.

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: The msp gene of T. denticola ATCC 35405 may be divided into three coding regions on the basis of sequence conservation with msp of T. denticola ATCC 33520 (Fig. ). .. To determine if these regions encoded Msp fragments with substrate binding properties, recombinant polypeptides corresponding to sequences within the N-terminal (rN-Msp, 14 to 202 aa residues), variable (rV-Msp, 203 to 259 aa residues), and C-terminal (rC-Msp, 272 to 543 aa residues) regions were purified.

    Article Title: Immunotopological Analysis of the Treponema denticola Major Surface Protein (Msp)
    Article Snippet: .. Samples were subjected to 10% SDS-PAGE and analyzed by Western blotting with rabbit antibodies raised against the ATCC 35405 Msp N-terminal domain (residues 14 to 202) , native ATCC 35405 Msp (this study), recombinant Msp , T. denticola ATCC 35405 cells , or T. denticola FlaA ( ). .. SDS-PAGE and Western immunoblotting were performed as described previously ( ).

    In Vitro:

    Article Title: Binding Properties and Adhesion-Mediating Regions of the Major Sheath Protein of Treponema denticola ATCC 35405
    Article Snippet: .. Receptor blocking experiments using rMsp from T. denticola ATCC 35405 confirmed that the N-terminal region of fibronectin is the only region targeted in vitro by T. denticola ATCC 35405. ..

    Chemotaxis Assay:

    Article Title: Motility and Chemotaxis in Tissue Penetration of Oral Epithelial Cell Layers by Treponema denticola
    Article Snippet: In this study, we addressed the role of motility and chemotaxis in tissue penetration by the periodontal disease-associated oral spirochete Treponema denticola using an oral epithelial cell line-based experimental approach. .. Wild-type T. denticola ATCC 35405 was found to penetrate the tissue layers effectively, whereas a nonmotile mutant was unable to overcome the tissue barrier.

    Staining:

    Article Title: Major Membrane Protein TDE2508 Regulates Adhesive Potency in Treponema denticola
    Article Snippet: Analysis of Major Membrane-Associated Proteins in T . denticola We analyzed the major proteins of the envelope (membrane) fraction in T . denticola ATCC 35405. .. Ten micrograms of the fraction was subjected to SDS-PAGE, then stained with CBB.

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    ATCC t denticola atcc 35405 ptrb protease homologue
    Circular representation of the T. pedis T A4 genome and complete genome alignment with T. <t>denticola</t> . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola <t>ATCC</t> 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.
    T Denticola Atcc 35405 Ptrb Protease Homologue, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/t denticola atcc 35405 ptrb protease homologue/product/ATCC
    Average 99 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    t denticola atcc 35405 ptrb protease homologue - by Bioz Stars, 2020-04
    99/100 stars
      Buy from Supplier

    Image Search Results


    Circular representation of the T. pedis T A4 genome and complete genome alignment with T. denticola . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola ATCC 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.

    Journal: PLoS ONE

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola

    doi: 10.1371/journal.pone.0071281

    Figure Lengend Snippet: Circular representation of the T. pedis T A4 genome and complete genome alignment with T. denticola . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola ATCC 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.

    Article Snippet: Amino acid alignments of T. denticola ATCC 35405 PtrB protease homologue (TDE1195) and identified homologues.

    Techniques: