Structured Review

Mine Safety Appliances ssr loci
The model-based clusters of wild Oryza rufipogon individuals from six populations (A to F) and two sets of rice cultivars from Guangdong, Guangxi and Fujian provinces (CV-1) and Gaozhou (CV-2) based on the STRUCTURE analysis ( K = 3) of <t>SSR</t> markers (panel A) and <t>InDel</t> markers (panel B). Identities of the wild populations and the cultivar groups are indicated below the figures (vertical bars) divided by black lines. The height of different colours in each individual designates its membership coefficient to the different clusters, and the same colour indicates the close consanguinity.
Ssr Loci, supplied by Mine Safety Appliances, used in various techniques. Bioz Stars score: 90/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/ssr loci/product/Mine Safety Appliances
Average 90 stars, based on 2 article reviews
Price from $9.99 to $1999.99
ssr loci - by Bioz Stars, 2020-07
90/100 stars

Images

1) Product Images from "Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation"

Article Title: Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation

Journal: AoB Plants

doi: 10.1093/aobpla/plx055

The model-based clusters of wild Oryza rufipogon individuals from six populations (A to F) and two sets of rice cultivars from Guangdong, Guangxi and Fujian provinces (CV-1) and Gaozhou (CV-2) based on the STRUCTURE analysis ( K = 3) of SSR markers (panel A) and InDel markers (panel B). Identities of the wild populations and the cultivar groups are indicated below the figures (vertical bars) divided by black lines. The height of different colours in each individual designates its membership coefficient to the different clusters, and the same colour indicates the close consanguinity.
Figure Legend Snippet: The model-based clusters of wild Oryza rufipogon individuals from six populations (A to F) and two sets of rice cultivars from Guangdong, Guangxi and Fujian provinces (CV-1) and Gaozhou (CV-2) based on the STRUCTURE analysis ( K = 3) of SSR markers (panel A) and InDel markers (panel B). Identities of the wild populations and the cultivar groups are indicated below the figures (vertical bars) divided by black lines. The height of different colours in each individual designates its membership coefficient to the different clusters, and the same colour indicates the close consanguinity.

Techniques Used:

UPGMA dendrogram showing genetic relationships of six wild Oryza rufipogon populations (Pop-A to Pop-F) and the two corresponding sets of rice cultivars (CV-1 for SSR and CV-2 for InDel) based on the Nei (1978) genetic distance calculated from the SSR (panel A) and InDel (panel B) data matrices, respectively. The dendrogram based on both SSR and InDel markers indicates relatively close genetic relationships of cultivated rice with the E-population.
Figure Legend Snippet: UPGMA dendrogram showing genetic relationships of six wild Oryza rufipogon populations (Pop-A to Pop-F) and the two corresponding sets of rice cultivars (CV-1 for SSR and CV-2 for InDel) based on the Nei (1978) genetic distance calculated from the SSR (panel A) and InDel (panel B) data matrices, respectively. The dendrogram based on both SSR and InDel markers indicates relatively close genetic relationships of cultivated rice with the E-population.

Techniques Used:

Related Articles

other:

Article Title: Conspecific Crop-Weed Introgression Influences Evolution of Weedy Rice (Oryza sativa f. spontanea) across a Geographical Range
Article Snippet: Our results, based on the fingerprinting of 22 SSR loci from another independent set of weedy rice samples with > 300 individuals from the 11 populations, demonstrated a considerable among-population variation in genetic diversity, as estimated by the average number of alleles per locus, the percentage of polymorphic loci, and Nei's genetic diversity.

Software:

Article Title: Conspecific Crop-Weed Introgression Influences Evolution of Weedy Rice (Oryza sativa f. spontanea) across a Geographical Range
Article Snippet: .. Genetic diversity was estimated from 301 plants of 11 weedy rice populations based on 22 SSR loci using the MSA (microsatellite analyzer) software ver. ..

Article Title: Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation
Article Snippet: .. The proportions of pairwise shared alleles (ps = Σk Σa min(f a ,i , f a ,j )/D ) among W populations and CVs either at the 34 SSR loci (CV-1) or 34 InDel loci (CV-2) were calculated, respectively, using the software Microsatellite Analyser (MSA) version 4.00 , where f a ,i /a ,j indicates the frequency of the allele a at the locus k in the population i /j , and D represents the number of loci. .. In addition, the frequencies of shared alleles by rice cultivars and W populations at different SSR and InDel loci were also calculated to assess possible introgression using the software GenAlEx ver.

Similar Products

  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
  • 90
    Mine Safety Appliances ssr loci
    The model-based clusters of wild Oryza rufipogon individuals from six populations (A to F) and two sets of rice cultivars from Guangdong, Guangxi and Fujian provinces (CV-1) and Gaozhou (CV-2) based on the STRUCTURE analysis ( K = 3) of <t>SSR</t> markers (panel A) and <t>InDel</t> markers (panel B). Identities of the wild populations and the cultivar groups are indicated below the figures (vertical bars) divided by black lines. The height of different colours in each individual designates its membership coefficient to the different clusters, and the same colour indicates the close consanguinity.
    Ssr Loci, supplied by Mine Safety Appliances, used in various techniques. Bioz Stars score: 90/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ssr loci/product/Mine Safety Appliances
    Average 90 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    ssr loci - by Bioz Stars, 2020-07
    90/100 stars
      Buy from Supplier

    Image Search Results


    The model-based clusters of wild Oryza rufipogon individuals from six populations (A to F) and two sets of rice cultivars from Guangdong, Guangxi and Fujian provinces (CV-1) and Gaozhou (CV-2) based on the STRUCTURE analysis ( K = 3) of SSR markers (panel A) and InDel markers (panel B). Identities of the wild populations and the cultivar groups are indicated below the figures (vertical bars) divided by black lines. The height of different colours in each individual designates its membership coefficient to the different clusters, and the same colour indicates the close consanguinity.

    Journal: AoB Plants

    Article Title: Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation

    doi: 10.1093/aobpla/plx055

    Figure Lengend Snippet: The model-based clusters of wild Oryza rufipogon individuals from six populations (A to F) and two sets of rice cultivars from Guangdong, Guangxi and Fujian provinces (CV-1) and Gaozhou (CV-2) based on the STRUCTURE analysis ( K = 3) of SSR markers (panel A) and InDel markers (panel B). Identities of the wild populations and the cultivar groups are indicated below the figures (vertical bars) divided by black lines. The height of different colours in each individual designates its membership coefficient to the different clusters, and the same colour indicates the close consanguinity.

    Article Snippet: The proportions of pairwise shared alleles (ps = Σk Σa min(f a ,i , f a ,j )/D ) among W populations and CVs either at the 34 SSR loci (CV-1) or 34 InDel loci (CV-2) were calculated, respectively, using the software Microsatellite Analyser (MSA) version 4.00 , where f a ,i /a ,j indicates the frequency of the allele a at the locus k in the population i /j , and D represents the number of loci.

    Techniques:

    UPGMA dendrogram showing genetic relationships of six wild Oryza rufipogon populations (Pop-A to Pop-F) and the two corresponding sets of rice cultivars (CV-1 for SSR and CV-2 for InDel) based on the Nei (1978) genetic distance calculated from the SSR (panel A) and InDel (panel B) data matrices, respectively. The dendrogram based on both SSR and InDel markers indicates relatively close genetic relationships of cultivated rice with the E-population.

    Journal: AoB Plants

    Article Title: Introgression from cultivated rice alters genetic structures of wild relative populations: implications for in situ conservation

    doi: 10.1093/aobpla/plx055

    Figure Lengend Snippet: UPGMA dendrogram showing genetic relationships of six wild Oryza rufipogon populations (Pop-A to Pop-F) and the two corresponding sets of rice cultivars (CV-1 for SSR and CV-2 for InDel) based on the Nei (1978) genetic distance calculated from the SSR (panel A) and InDel (panel B) data matrices, respectively. The dendrogram based on both SSR and InDel markers indicates relatively close genetic relationships of cultivated rice with the E-population.

    Article Snippet: The proportions of pairwise shared alleles (ps = Σk Σa min(f a ,i , f a ,j )/D ) among W populations and CVs either at the 34 SSR loci (CV-1) or 34 InDel loci (CV-2) were calculated, respectively, using the software Microsatellite Analyser (MSA) version 4.00 , where f a ,i /a ,j indicates the frequency of the allele a at the locus k in the population i /j , and D represents the number of loci.

    Techniques: