btgi restriction enzyme  (New England Biolabs)


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    New England Biolabs btgi restriction enzyme
    <t>BtgI</t> digestion of polymerase chain reaction amplified product (Lane 1: CT heterozygous, 2-4: TT homozygous and 5: CC-homozygous variant)
    Btgi Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    btgi restriction enzyme - by Bioz Stars, 2023-01
    86/100 stars

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    1) Product Images from "Association of SRXN1 Receptor Gene Polymorphism with Susceptibility to Periodontitis"

    Article Title: Association of SRXN1 Receptor Gene Polymorphism with Susceptibility to Periodontitis

    Journal: Contemporary Clinical Dentistry

    doi: 10.4103/ccd.ccd_309_21

    BtgI digestion of polymerase chain reaction amplified product (Lane 1: CT heterozygous, 2-4: TT homozygous and 5: CC-homozygous variant)
    Figure Legend Snippet: BtgI digestion of polymerase chain reaction amplified product (Lane 1: CT heterozygous, 2-4: TT homozygous and 5: CC-homozygous variant)

    Techniques Used: Polymerase Chain Reaction, Amplification, Variant Assay

    kasi restriction enzyme  (New England Biolabs)


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    New England Biolabs kasi restriction enzyme
    Kasi Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    restriction enzymes msel  (New England Biolabs)


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    New England Biolabs restriction enzymes msel
    Restriction Enzymes Msel, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    hindiii restriction enzyme  (New England Biolabs)


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    New England Biolabs hindiii restriction enzyme
    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme <t>(HindIII)</t> ( A ) and a four-cutter restriction <t>enzyme</t> <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Hindiii Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution"

    Article Title: Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution

    Journal: Nature Communications

    doi: 10.1038/s41467-023-35911-8

    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Figure Legend Snippet: Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.

    Techniques Used: Generated

    mboi restriction enzyme  (New England Biolabs)


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    New England Biolabs mboi restriction enzyme
    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction <t>enzyme</t> <t>(HindIII)</t> ( A ) and a four-cutter restriction enzyme <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Mboi Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution"

    Article Title: Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution

    Journal: Nature Communications

    doi: 10.1038/s41467-023-35911-8

    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Figure Legend Snippet: Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.

    Techniques Used: Generated

    dpni restriction enzyme  (New England Biolabs)


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    New England Biolabs dpni restriction enzyme
    Dpni Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    restriction enzyme sma  (New England Biolabs)


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    New England Biolabs restriction enzyme sma
    Restriction Enzyme Sma, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    bamhi restriction enzyme sites  (New England Biolabs)


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    New England Biolabs bamhi restriction enzyme sites
    Bamhi Restriction Enzyme Sites, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    restriction enzyme sbfl  (New England Biolabs)


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    New England Biolabs restriction enzyme sbfl
    Restriction Enzyme Sbfl, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    restriction enzyme rsa  (New England Biolabs)


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    New England Biolabs restriction enzyme rsa
    Restriction Enzyme Rsa, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    New England Biolabs btgi restriction enzyme
    <t>BtgI</t> digestion of polymerase chain reaction amplified product (Lane 1: CT heterozygous, 2-4: TT homozygous and 5: CC-homozygous variant)
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    <t>BtgI</t> digestion of polymerase chain reaction amplified product (Lane 1: CT heterozygous, 2-4: TT homozygous and 5: CC-homozygous variant)
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    New England Biolabs hindiii restriction enzyme
    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme <t>(HindIII)</t> ( A ) and a four-cutter restriction <t>enzyme</t> <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Hindiii Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction <t>enzyme</t> <t>(HindIII)</t> ( A ) and a four-cutter restriction enzyme <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Mboi Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    New England Biolabs dpni restriction enzyme
    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction <t>enzyme</t> <t>(HindIII)</t> ( A ) and a four-cutter restriction enzyme <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Dpni Restriction Enzyme, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    New England Biolabs restriction enzyme sma
    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction <t>enzyme</t> <t>(HindIII)</t> ( A ) and a four-cutter restriction enzyme <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Restriction Enzyme Sma, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    New England Biolabs bamhi restriction enzyme sites
    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction <t>enzyme</t> <t>(HindIII)</t> ( A ) and a four-cutter restriction enzyme <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
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    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction <t>enzyme</t> <t>(HindIII)</t> ( A ) and a four-cutter restriction enzyme <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
    Restriction Enzyme Sbfl, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    New England Biolabs restriction enzyme rsa
    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction <t>enzyme</t> <t>(HindIII)</t> ( A ) and a four-cutter restriction enzyme <t>(MboI)</t> ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.
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    Image Search Results


    BtgI digestion of polymerase chain reaction amplified product (Lane 1: CT heterozygous, 2-4: TT homozygous and 5: CC-homozygous variant)

    Journal: Contemporary Clinical Dentistry

    Article Title: Association of SRXN1 Receptor Gene Polymorphism with Susceptibility to Periodontitis

    doi: 10.4103/ccd.ccd_309_21

    Figure Lengend Snippet: BtgI digestion of polymerase chain reaction amplified product (Lane 1: CT heterozygous, 2-4: TT homozygous and 5: CC-homozygous variant)

    Article Snippet: Fifteen microliter of PCR product was digested using BtgI restriction enzyme procured from New England Biolabs, England.

    Techniques: Polymerase Chain Reaction, Amplification, Variant Assay

    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.

    Journal: Nature Communications

    Article Title: Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution

    doi: 10.1038/s41467-023-35911-8

    Figure Lengend Snippet: Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.

    Article Snippet: After incubation at 37 °C and 950 rpm for 30 min, 37.5 µl 10% Triton X-100 (AppliChem cat. #A4975,0100) were laid on the wall of the tube, mixed by inversion and incubated at 37 °C and 950 rpm for 30 min. Chromatin within the nuclei was overnight digested at 37 °C and 950 rpm after adding 7.5 µl of HindIII restriction enzyme at 100U/µl or 37.5 µl of MboI restriction enzyme at 25U/µl (New England Biolabs cat. #R0104T or #R0147M).

    Techniques: Generated

    Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.

    Journal: Nature Communications

    Article Title: Low input capture Hi-C (liCHi-C) identifies promoter-enhancer interactions at high-resolution

    doi: 10.1038/s41467-023-35911-8

    Figure Lengend Snippet: Detection of structural variants using liCHi-C data for B-cell precursor acute lymphoblastic leukemia (B-ALL) sample 3 generated using a six-cutter restriction enzyme (HindIII) ( A ) and a four-cutter restriction enzyme (MboI) ( B ). Gray matrices represent the ratio between B-ALL and CLP contact matrices at 1 Mb resolution across the genome. Black arrows indicate the location of copy number losses. C Absolute frequency of interaction according to the genomic distance between interacting regions for liCHi-C libraries generated with MboI (blue) and HindIII (green) digestion, respectively. The median and highest absolute frequency of interactions are represented by solid and dashed lines, respectively. D DDX41 gene promoter-centered interaction landscape (arcs) generated with HindIII (top) and MboI (bottom), respectively. Green shade depicts the DDX41 gene promoter, while yellow shades depict putative enhancer regions for it. Arrows symbolize gene placement and orientation along the genomic window.

    Article Snippet: After incubation at 37 °C and 950 rpm for 30 min, 37.5 µl 10% Triton X-100 (AppliChem cat. #A4975,0100) were laid on the wall of the tube, mixed by inversion and incubated at 37 °C and 950 rpm for 30 min. Chromatin within the nuclei was overnight digested at 37 °C and 950 rpm after adding 7.5 µl of HindIII restriction enzyme at 100U/µl or 37.5 µl of MboI restriction enzyme at 25U/µl (New England Biolabs cat. #R0104T or #R0147M).

    Techniques: Generated