pantoea agglomerans  (ATCC)


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    ATCC pantoea agglomerans
    Antibacterial activity of Senecio nutans ethanolic extract.
    Pantoea Agglomerans, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "Effect of In Vitro Micropropagation on the Chemical, Antioxidant, and Biological Characteristics of Senecio nutans Sch. Bip., an Endemic Plant of the Atacama Desert Andean Region"

    Article Title: Effect of In Vitro Micropropagation on the Chemical, Antioxidant, and Biological Characteristics of Senecio nutans Sch. Bip., an Endemic Plant of the Atacama Desert Andean Region

    Journal: Plants

    doi: 10.3390/plants13060755

    Antibacterial activity of Senecio nutans ethanolic extract.
    Figure Legend Snippet: Antibacterial activity of Senecio nutans ethanolic extract.

    Techniques Used: Activity Assay

    pantoea agglomerans kacc 10054  (ATCC)


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    ATCC pantoea agglomerans kacc 10054
    Pantoea Agglomerans Kacc 10054, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    pantoea sp gm01  (ATCC)


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    ATCC pantoea sp gm01
    The scs locus from Salmonella and paralogue species . The figure shows the chromosomal region of organisms harboring scsABCD homologs (analysis performed on the “Seed Viewer”, http://pubseed.theseed.org ). Only a representative strain from either S . enterica or S . bongori is included in the figure, but all Salmonella genomes have the scsABCD locus. The S. enterica scsABCD promoter is indicated with a black arrow . The identified ( black boxes ) or predicted ( gray boxes ) direct repeats corresponding to the CpxR-binding sites upstream of scsABCD promoter are shown. The full names of analyzed strains are Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; <t>Pantoea</t> sp <t>GM01;</t> Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.
    Pantoea Sp Gm01, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "Scs system links copper and redox homeostasis in bacterial pathogens"

    Article Title: Scs system links copper and redox homeostasis in bacterial pathogens

    Journal: The Journal of Biological Chemistry

    doi: 10.1016/j.jbc.2024.105710

    The scs locus from Salmonella and paralogue species . The figure shows the chromosomal region of organisms harboring scsABCD homologs (analysis performed on the “Seed Viewer”, http://pubseed.theseed.org ). Only a representative strain from either S . enterica or S . bongori is included in the figure, but all Salmonella genomes have the scsABCD locus. The S. enterica scsABCD promoter is indicated with a black arrow . The identified ( black boxes ) or predicted ( gray boxes ) direct repeats corresponding to the CpxR-binding sites upstream of scsABCD promoter are shown. The full names of analyzed strains are Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; Pantoea sp GM01; Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.
    Figure Legend Snippet: The scs locus from Salmonella and paralogue species . The figure shows the chromosomal region of organisms harboring scsABCD homologs (analysis performed on the “Seed Viewer”, http://pubseed.theseed.org ). Only a representative strain from either S . enterica or S . bongori is included in the figure, but all Salmonella genomes have the scsABCD locus. The S. enterica scsABCD promoter is indicated with a black arrow . The identified ( black boxes ) or predicted ( gray boxes ) direct repeats corresponding to the CpxR-binding sites upstream of scsABCD promoter are shown. The full names of analyzed strains are Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; Pantoea sp GM01; Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.

    Techniques Used: Binding Assay

    peg 2693 pantoea allii fig  (ATCC)


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    ATCC peg 2693 pantoea allii fig
    Peg 2693 Pantoea Allii Fig, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    pantoea strains atcc 35400  (ATCC)


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    ATCC pantoea strains atcc 35400
    Tailocin protein loci and current annotations
    Pantoea Strains Atcc 35400, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes"

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    Journal: Applied and Environmental Microbiology

    doi: 10.1128/aem.00929-23

    Tailocin protein loci and current annotations
    Figure Legend Snippet: Tailocin protein loci and current annotations

    Techniques Used:

    Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.
    Figure Legend Snippet: Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.

    Techniques Used: Activity Assay, Mutagenesis

    pantoea ananatis atcc 35400  (ATCC)


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    ATCC pantoea ananatis atcc 35400
    Genetic/genomic resources
    Pantoea Ananatis Atcc 35400, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/pantoea ananatis atcc 35400/product/ATCC
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    pantoea ananatis atcc 35400 - by Bioz Stars, 2024-04
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    Images

    1) Product Images from "Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes"

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    Journal: Applied and Environmental Microbiology

    doi: 10.1128/aem.00929-23

    Genetic/genomic resources
    Figure Legend Snippet: Genetic/genomic resources

    Techniques Used: Bacteria, Conjugation Assay

    Tailocin protein loci and current annotations
    Figure Legend Snippet: Tailocin protein loci and current annotations

    Techniques Used:

    Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.
    Figure Legend Snippet: Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.

    Techniques Used: Activity Assay, Mutagenesis

    pantoea stewartii subspecies  (ATCC)


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    ATCC pantoea stewartii subspecies
    <t>Pantoea</t> strain ICMP 10132 was identified as P. <t>stewartii</t> subsp. indologenes using P. stewartii subspecies-specific PCR . ( A ) P. stewartii subsp. indologenes -specific 3614 galE PCR showed a positive band (250 bp) for the reactions containing the genomic DNA of P. stewartii subsp. indologenes type strain and ICMP 10132, whereas ( B ) P. stewartii subsp. stewartii -specific DC283 galE PCR yielded a positive band (250 bp) for the reaction carrying the genomic DNA of P. stewartii subsp. stewartii -type strain DC283 only. Species identification of Pantoea strains ATCC 35400 and ICMP 20132 using OrthoANI revealed that the strains ATCC 35400 and ICMP 10132 are P. ananatis and P. stewartii subspecies indologenes , respectively. Over 95% average nucleotide identity was shared between the genomes of strains belonging to ATCC 35400 and P. ananatis PNA 97-1R, as well as the genomes of ICMP 10132 and two subspecies of P. stewartii .
    Pantoea Stewartii Subspecies, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "Draft genome sequences for Pantoea ananatis ATCC 35400 and Pantoea stewartii subspecies indologenes ICMP 10132"

    Article Title: Draft genome sequences for Pantoea ananatis ATCC 35400 and Pantoea stewartii subspecies indologenes ICMP 10132

    Journal: Microbiology Resource Announcements

    doi: 10.1128/MRA.00471-23

    Pantoea strain ICMP 10132 was identified as P. stewartii subsp. indologenes using P. stewartii subspecies-specific PCR . ( A ) P. stewartii subsp. indologenes -specific 3614 galE PCR showed a positive band (250 bp) for the reactions containing the genomic DNA of P. stewartii subsp. indologenes type strain and ICMP 10132, whereas ( B ) P. stewartii subsp. stewartii -specific DC283 galE PCR yielded a positive band (250 bp) for the reaction carrying the genomic DNA of P. stewartii subsp. stewartii -type strain DC283 only. Species identification of Pantoea strains ATCC 35400 and ICMP 20132 using OrthoANI revealed that the strains ATCC 35400 and ICMP 10132 are P. ananatis and P. stewartii subspecies indologenes , respectively. Over 95% average nucleotide identity was shared between the genomes of strains belonging to ATCC 35400 and P. ananatis PNA 97-1R, as well as the genomes of ICMP 10132 and two subspecies of P. stewartii .
    Figure Legend Snippet: Pantoea strain ICMP 10132 was identified as P. stewartii subsp. indologenes using P. stewartii subspecies-specific PCR . ( A ) P. stewartii subsp. indologenes -specific 3614 galE PCR showed a positive band (250 bp) for the reactions containing the genomic DNA of P. stewartii subsp. indologenes type strain and ICMP 10132, whereas ( B ) P. stewartii subsp. stewartii -specific DC283 galE PCR yielded a positive band (250 bp) for the reaction carrying the genomic DNA of P. stewartii subsp. stewartii -type strain DC283 only. Species identification of Pantoea strains ATCC 35400 and ICMP 20132 using OrthoANI revealed that the strains ATCC 35400 and ICMP 10132 are P. ananatis and P. stewartii subspecies indologenes , respectively. Over 95% average nucleotide identity was shared between the genomes of strains belonging to ATCC 35400 and P. ananatis PNA 97-1R, as well as the genomes of ICMP 10132 and two subspecies of P. stewartii .

    Techniques Used:

    pantoea strains  (ATCC)


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    ATCC pantoea strains
    Pantoea Strains, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    pantoea stewartii subspecies  (ATCC)


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    ATCC pantoea stewartii subspecies
    Genetic/genomic resources
    Pantoea Stewartii Subspecies, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes"

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    Journal: Applied and Environmental Microbiology

    doi: 10.1128/aem.00929-23

    Genetic/genomic resources
    Figure Legend Snippet: Genetic/genomic resources

    Techniques Used: Bacteria, Conjugation Assay

    Alignment of Pantailocin loci across P. ananatis and P. stewartii strains. Nucleotide sequences for regions spanning the tape measure protein to baseplate protein V from predicted tailocin regions for numerous P. ananatis and P. stewartii strains were aligned, and the alignment and predicted ORFs within each tailocin locus are shown. Nucleotide similarity is displayed by both the height of the alignment similarity bar as well as the colors within the bar itself (green, >80% similarity; yellow, 40%–80% similarity; red, <40% similarity). Potential tail fiber proteins and their chaperones are colored blue, the potential invertase is colored purple, and all other predicted tailocin genes are shown in white. Loci used to infer phylogenetic relationships are colored green. Image originally created in Geneious Prime 2020.2.4 (https://www.geneious.com) and modified thereafter. Original alignments and phylogenetic data can be found at https://doi.org/10.6084/m9.figshare.22596982.v1.
    Figure Legend Snippet: Alignment of Pantailocin loci across P. ananatis and P. stewartii strains. Nucleotide sequences for regions spanning the tape measure protein to baseplate protein V from predicted tailocin regions for numerous P. ananatis and P. stewartii strains were aligned, and the alignment and predicted ORFs within each tailocin locus are shown. Nucleotide similarity is displayed by both the height of the alignment similarity bar as well as the colors within the bar itself (green, >80% similarity; yellow, 40%–80% similarity; red, <40% similarity). Potential tail fiber proteins and their chaperones are colored blue, the potential invertase is colored purple, and all other predicted tailocin genes are shown in white. Loci used to infer phylogenetic relationships are colored green. Image originally created in Geneious Prime 2020.2.4 (https://www.geneious.com) and modified thereafter. Original alignments and phylogenetic data can be found at https://doi.org/10.6084/m9.figshare.22596982.v1.

    Techniques Used: Modification

    Phylogenetic relationships of Pantailocin loci compared to other phage and tailocins. Maximum likelihood phylogenies for the (A) J plate and (B) sheath protein were inferred using alignments from predicted and known tailocins as well as related phage and prophage. Bootstrap values are shown for major nodes, but when not shown, bootstrap values are generally <75 (e.g., in the P. ananatis and P. stewartii tailocin clades where there is little resolution to determine phylogenetic relationships).
    Figure Legend Snippet: Phylogenetic relationships of Pantailocin loci compared to other phage and tailocins. Maximum likelihood phylogenies for the (A) J plate and (B) sheath protein were inferred using alignments from predicted and known tailocins as well as related phage and prophage. Bootstrap values are shown for major nodes, but when not shown, bootstrap values are generally <75 (e.g., in the P. ananatis and P. stewartii tailocin clades where there is little resolution to determine phylogenetic relationships).

    Techniques Used:

    pantoea strains atcc 35400  (ATCC)


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    ATCC pantoea strains atcc 35400
    Tailocin protein loci and current annotations
    Pantoea Strains Atcc 35400, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/pantoea strains atcc 35400/product/ATCC
    Average 86 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    pantoea strains atcc 35400 - by Bioz Stars, 2024-04
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    Images

    1) Product Images from "Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes"

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    Journal: Applied and Environmental Microbiology

    doi: 10.1128/aem.00929-23

    Tailocin protein loci and current annotations
    Figure Legend Snippet: Tailocin protein loci and current annotations

    Techniques Used:

    Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.
    Figure Legend Snippet: Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.

    Techniques Used: Activity Assay, Mutagenesis

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    ATCC pantoea agglomerans
    Antibacterial activity of Senecio nutans ethanolic extract.
    Pantoea Agglomerans, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC pantoea agglomerans kacc 10054
    Antibacterial activity of Senecio nutans ethanolic extract.
    Pantoea Agglomerans Kacc 10054, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC pantoea sp gm01
    The scs locus from Salmonella and paralogue species . The figure shows the chromosomal region of organisms harboring scsABCD homologs (analysis performed on the “Seed Viewer”, http://pubseed.theseed.org ). Only a representative strain from either S . enterica or S . bongori is included in the figure, but all Salmonella genomes have the scsABCD locus. The S. enterica scsABCD promoter is indicated with a black arrow . The identified ( black boxes ) or predicted ( gray boxes ) direct repeats corresponding to the CpxR-binding sites upstream of scsABCD promoter are shown. The full names of analyzed strains are Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; <t>Pantoea</t> sp <t>GM01;</t> Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.
    Pantoea Sp Gm01, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    86
    ATCC peg 2693 pantoea allii fig
    The scs locus from Salmonella and paralogue species . The figure shows the chromosomal region of organisms harboring scsABCD homologs (analysis performed on the “Seed Viewer”, http://pubseed.theseed.org ). Only a representative strain from either S . enterica or S . bongori is included in the figure, but all Salmonella genomes have the scsABCD locus. The S. enterica scsABCD promoter is indicated with a black arrow . The identified ( black boxes ) or predicted ( gray boxes ) direct repeats corresponding to the CpxR-binding sites upstream of scsABCD promoter are shown. The full names of analyzed strains are Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; <t>Pantoea</t> sp <t>GM01;</t> Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.
    Peg 2693 Pantoea Allii Fig, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    86
    ATCC pantoea strains atcc 35400
    Tailocin protein loci and current annotations
    Pantoea Strains Atcc 35400, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    86
    ATCC pantoea ananatis atcc 35400
    Genetic/genomic resources
    Pantoea Ananatis Atcc 35400, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    86
    ATCC pantoea stewartii subspecies
    <t>Pantoea</t> strain ICMP 10132 was identified as P. <t>stewartii</t> subsp. indologenes using P. stewartii subspecies-specific PCR . ( A ) P. stewartii subsp. indologenes -specific 3614 galE PCR showed a positive band (250 bp) for the reactions containing the genomic DNA of P. stewartii subsp. indologenes type strain and ICMP 10132, whereas ( B ) P. stewartii subsp. stewartii -specific DC283 galE PCR yielded a positive band (250 bp) for the reaction carrying the genomic DNA of P. stewartii subsp. stewartii -type strain DC283 only. Species identification of Pantoea strains ATCC 35400 and ICMP 20132 using OrthoANI revealed that the strains ATCC 35400 and ICMP 10132 are P. ananatis and P. stewartii subspecies indologenes , respectively. Over 95% average nucleotide identity was shared between the genomes of strains belonging to ATCC 35400 and P. ananatis PNA 97-1R, as well as the genomes of ICMP 10132 and two subspecies of P. stewartii .
    Pantoea Stewartii Subspecies, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    86
    ATCC pantoea strains
    <t>Pantoea</t> strain ICMP 10132 was identified as P. <t>stewartii</t> subsp. indologenes using P. stewartii subspecies-specific PCR . ( A ) P. stewartii subsp. indologenes -specific 3614 galE PCR showed a positive band (250 bp) for the reactions containing the genomic DNA of P. stewartii subsp. indologenes type strain and ICMP 10132, whereas ( B ) P. stewartii subsp. stewartii -specific DC283 galE PCR yielded a positive band (250 bp) for the reaction carrying the genomic DNA of P. stewartii subsp. stewartii -type strain DC283 only. Species identification of Pantoea strains ATCC 35400 and ICMP 20132 using OrthoANI revealed that the strains ATCC 35400 and ICMP 10132 are P. ananatis and P. stewartii subspecies indologenes , respectively. Over 95% average nucleotide identity was shared between the genomes of strains belonging to ATCC 35400 and P. ananatis PNA 97-1R, as well as the genomes of ICMP 10132 and two subspecies of P. stewartii .
    Pantoea Strains, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Image Search Results


    Antibacterial activity of Senecio nutans ethanolic extract.

    Journal: Plants

    Article Title: Effect of In Vitro Micropropagation on the Chemical, Antioxidant, and Biological Characteristics of Senecio nutans Sch. Bip., an Endemic Plant of the Atacama Desert Andean Region

    doi: 10.3390/plants13060755

    Figure Lengend Snippet: Antibacterial activity of Senecio nutans ethanolic extract.

    Article Snippet: The S. nutans ethanolic extract was used to determine its antibacterial activity against human pathogenic bacteria Bacillus subtilis (ATCC 6051), Escherichia coli (ATCC 23716), Salmonella enterica (ATCC 13311), Pseudomonas aeruginosa (ATCC 19429), and Staphylococcus aureus (ATCC 29737) and the phytopathogenic bacteria Agrobacterium tumefaciens (ATCC 19358), Erwinia rhapontici (MK883065), Pantoea agglomerans (MK883087), Pseudomonas syringae (MF547632), and Xanthomonas campestris (MH885473).

    Techniques: Activity Assay

    The scs locus from Salmonella and paralogue species . The figure shows the chromosomal region of organisms harboring scsABCD homologs (analysis performed on the “Seed Viewer”, http://pubseed.theseed.org ). Only a representative strain from either S . enterica or S . bongori is included in the figure, but all Salmonella genomes have the scsABCD locus. The S. enterica scsABCD promoter is indicated with a black arrow . The identified ( black boxes ) or predicted ( gray boxes ) direct repeats corresponding to the CpxR-binding sites upstream of scsABCD promoter are shown. The full names of analyzed strains are Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; Pantoea sp GM01; Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.

    Journal: The Journal of Biological Chemistry

    Article Title: Scs system links copper and redox homeostasis in bacterial pathogens

    doi: 10.1016/j.jbc.2024.105710

    Figure Lengend Snippet: The scs locus from Salmonella and paralogue species . The figure shows the chromosomal region of organisms harboring scsABCD homologs (analysis performed on the “Seed Viewer”, http://pubseed.theseed.org ). Only a representative strain from either S . enterica or S . bongori is included in the figure, but all Salmonella genomes have the scsABCD locus. The S. enterica scsABCD promoter is indicated with a black arrow . The identified ( black boxes ) or predicted ( gray boxes ) direct repeats corresponding to the CpxR-binding sites upstream of scsABCD promoter are shown. The full names of analyzed strains are Salmonella enterica subsp. enterica serovar Typhimurium str. LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; Pantoea sp GM01; Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.

    Article Snippet: LT2; Salmonella bongori 12,149; Citrobacter sp. 30_2; Cedecea davisae DSM 4568; Escherichia coli TA206; Serratia sp. AS13; Yersinia sp; Raoultella ornithinolytica B6; Enterobacter sp B509; Klebsiella sp 1_1_55; Hafnia alvei ATCC 51873; Erwinia billingiae Eb661; Aeromonas sp 159; Pantoea sp GM01; Proteus mirabilis HI4320; Providencia stuartii MRSN 2154; Vibrio sp MED222; Photobacterium profundum SS9; Cronobacter zakazakii ATCC BAA-894; Shewanella sp W3-18-1; Haemophilus influenzae R2846; Neisseria meningitidis FAM18.

    Techniques: Binding Assay

    Tailocin protein loci and current annotations

    Journal: Applied and Environmental Microbiology

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    doi: 10.1128/aem.00929-23

    Figure Lengend Snippet: Tailocin protein loci and current annotations

    Article Snippet: The tailocin baseplate and sheath proteins from Pantoea strains ATCC 35400 and ICMP 10132 form clades with predicted Pantailocin loci from closely related strains within the same species.

    Techniques:

    Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.

    Journal: Applied and Environmental Microbiology

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    doi: 10.1128/aem.00929-23

    Figure Lengend Snippet: Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.

    Article Snippet: The tailocin baseplate and sheath proteins from Pantoea strains ATCC 35400 and ICMP 10132 form clades with predicted Pantailocin loci from closely related strains within the same species.

    Techniques: Activity Assay, Mutagenesis

    Genetic/genomic resources

    Journal: Applied and Environmental Microbiology

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    doi: 10.1128/aem.00929-23

    Figure Lengend Snippet: Genetic/genomic resources

    Article Snippet: See " Draft genome sequences for Pantoea ananatis ATCC 35400 and Pantoea stewartii subspecies indologenes ICMP 10132 " in Microbiol Resour Announc , volume 12, e00471-23.

    Techniques: Bacteria, Conjugation Assay

    Tailocin protein loci and current annotations

    Journal: Applied and Environmental Microbiology

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    doi: 10.1128/aem.00929-23

    Figure Lengend Snippet: Tailocin protein loci and current annotations

    Article Snippet: See " Draft genome sequences for Pantoea ananatis ATCC 35400 and Pantoea stewartii subspecies indologenes ICMP 10132 " in Microbiol Resour Announc , volume 12, e00471-23.

    Techniques:

    Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.

    Journal: Applied and Environmental Microbiology

    Article Title: Pantailocins: phage-derived bacteriocins from Pantoea ananatis and Pantoea stewartii subsp. indologenes

    doi: 10.1128/aem.00929-23

    Figure Lengend Snippet: Deletion of tailocin structural genes abolishes killing activity for both strains. We created mutants for each strain whereby multiple tailocin structural genes were deleted (see Fig. 3). Tailocin preparations for both wild-type and mutant strains were then overlaid onto the two original target strains (PNA 97-1R and ATCC 35400). Tailocin-like activity is demonstrated by clear and crisp killing zones by each strain against its original target and is abolished in each mutant. Original images can be found at 10.6084/m9.figshare.22596982.v1.

    Article Snippet: See " Draft genome sequences for Pantoea ananatis ATCC 35400 and Pantoea stewartii subspecies indologenes ICMP 10132 " in Microbiol Resour Announc , volume 12, e00471-23.

    Techniques: Activity Assay, Mutagenesis

    Pantoea strain ICMP 10132 was identified as P. stewartii subsp. indologenes using P. stewartii subspecies-specific PCR . ( A ) P. stewartii subsp. indologenes -specific 3614 galE PCR showed a positive band (250 bp) for the reactions containing the genomic DNA of P. stewartii subsp. indologenes type strain and ICMP 10132, whereas ( B ) P. stewartii subsp. stewartii -specific DC283 galE PCR yielded a positive band (250 bp) for the reaction carrying the genomic DNA of P. stewartii subsp. stewartii -type strain DC283 only. Species identification of Pantoea strains ATCC 35400 and ICMP 20132 using OrthoANI revealed that the strains ATCC 35400 and ICMP 10132 are P. ananatis and P. stewartii subspecies indologenes , respectively. Over 95% average nucleotide identity was shared between the genomes of strains belonging to ATCC 35400 and P. ananatis PNA 97-1R, as well as the genomes of ICMP 10132 and two subspecies of P. stewartii .

    Journal: Microbiology Resource Announcements

    Article Title: Draft genome sequences for Pantoea ananatis ATCC 35400 and Pantoea stewartii subspecies indologenes ICMP 10132

    doi: 10.1128/MRA.00471-23

    Figure Lengend Snippet: Pantoea strain ICMP 10132 was identified as P. stewartii subsp. indologenes using P. stewartii subspecies-specific PCR . ( A ) P. stewartii subsp. indologenes -specific 3614 galE PCR showed a positive band (250 bp) for the reactions containing the genomic DNA of P. stewartii subsp. indologenes type strain and ICMP 10132, whereas ( B ) P. stewartii subsp. stewartii -specific DC283 galE PCR yielded a positive band (250 bp) for the reaction carrying the genomic DNA of P. stewartii subsp. stewartii -type strain DC283 only. Species identification of Pantoea strains ATCC 35400 and ICMP 20132 using OrthoANI revealed that the strains ATCC 35400 and ICMP 10132 are P. ananatis and P. stewartii subspecies indologenes , respectively. Over 95% average nucleotide identity was shared between the genomes of strains belonging to ATCC 35400 and P. ananatis PNA 97-1R, as well as the genomes of ICMP 10132 and two subspecies of P. stewartii .

    Article Snippet: We recently described a new phage-derived bacteriocin locus present within a subset of Pantoea isolates ( ) and characterized pathways for the production of these molecules from two different strains: Pantoea ananatis ATCC 35400 and Pantoea stewartii subspecies indologenes ICMP 10132.

    Techniques: