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msd analyzer plugin  (MathWorks Inc)


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    Structured Review

    MathWorks Inc msd analyzer plugin
    Msd Analyzer Plugin, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/msd+analyzer+plugin/pm39322740-329-12-19
    Average 90 stars, based on 1 article reviews
    msd analyzer plugin - by Bioz Stars, 2026-09
    90/100 stars

    Images

    Related Articles

    Knock-Out:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Recombinant:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Plasmid Preparation:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Knockdown:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Expressing:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Transduction:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Sequencing:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Software:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Enzyme-linked Immunosorbent Assay:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Blocking Assay:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Transfection:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Isolation:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.

    Western Blot:

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis.
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin (https://tinevez.github.io/ msdanalyzer/) on the MATLAB platform (Tarantino et al, 2014). .. The blinding procedure was not applied.

    Article Title: Kinesin-1 mediates proper ER folding of the Ca V 1.2 channel and maintains mouse glucose homeostasis
    Article Snippet: of beta cells, membrane depolarization of beta cells, Rho-family GTPase activation, and islet perifusion results were subjected to two-way ANOVA. .. The movements of insulin granules were subjected to MSD analysis using the MSD Analyzer plugin ( https://tinevez.github.io/msdanalyzer/ ) on the MATLAB platform (Tarantino et al, ). .. The blinding procedure was not applied.



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    MathWorks Inc msd analyzer matlab plugin
    Soluble (non-MT) tubulin activates processive motility of HSET on single MTs. a Schematic. EGFP-HSET truncations were diluted in P12 buffer and monitored on GMPCPP-stabilized MTs by time-lapse TIRF. b Representative kymographs for time-lapse TIRF images for the indicated constructs at the following concentrations: EGFP-HSET and EGFP-HSETΔMotor, 50 pM. EGFP-HSETΔTail, 250 pM. Distance is on the x -axis (scale bar, 10 µm), and time is on the y -axis (scale bar, 10 s). c Mean-squared displacement <t>(MSD)</t> analysis of particle motion. The reported diffusion constant D is determined from a linear fit over the first 5 s, with the units nm 2 /s: EGFP-HSET: D = 6.3 × 10 4 , n = 206; EGFP-HSETΔMotor: D = 9.4 × 10 4 , n = 197; EGFP-HSETΔTail: D = 0.1 × 10 4 , n = 200. Data are presented as the calculated mean MSD ( y -axis) from two independent experiments over the indicated time intervals ( x -axis) for the indicated n particles ± SEM. d EGFP-HSET in BRB80 + 50 mM KCl was observed in the absence (left) or presence (right) of soluble tubulin and visualized by kymograph ( x -scale bar, distance, 10 µm; y -scale bar, time, 1 min). e Quantification of processive (≥5 s) event frequency as a function of [EGFP-HSET] in the presence (dark green) or absence (light green) of 2 µM tubulin. Data are presented as the number of processive events divided by the total observed MT length multiplied by the observation time for two independent experiments ± SD calculated from N ≥ 10 movies for each condition. Boxes represent first and third quartiles, whiskers represent detection limits, and lines represent median (mean overlaid). f Unlabeled HSET was mixed with 10 nM Cy5-tubulin in BRB80 + 50 mM KCl and observed. Velocities and run lengths of moving Cy5-tubulin particles were determined by kymograph and plotted as histograms. Data are reported as the mean velocity and run length values of n particles from CDF fitting ± the 95% CI from bootstrapping from two independent experiments. g 100 nM Cy5-tubulin (magenta) and 1 nM EGFP-HSET (green) were observed near-simultaneously by high-speed TIRF in BRB80 + 50 mM KCl, and visualized by kymograph ( x -scale bar, distance, 5 µm; y -scale bar, time, 10 s)
    Msd Analyzer Matlab Plugin, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/msd+analyzer+plugin/pmc06037785-293-6-8
    Average 90 stars, based on 1 article reviews
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    Image Search Results


    Soluble (non-MT) tubulin activates processive motility of HSET on single MTs. a Schematic. EGFP-HSET truncations were diluted in P12 buffer and monitored on GMPCPP-stabilized MTs by time-lapse TIRF. b Representative kymographs for time-lapse TIRF images for the indicated constructs at the following concentrations: EGFP-HSET and EGFP-HSETΔMotor, 50 pM. EGFP-HSETΔTail, 250 pM. Distance is on the x -axis (scale bar, 10 µm), and time is on the y -axis (scale bar, 10 s). c Mean-squared displacement (MSD) analysis of particle motion. The reported diffusion constant D is determined from a linear fit over the first 5 s, with the units nm 2 /s: EGFP-HSET: D = 6.3 × 10 4 , n = 206; EGFP-HSETΔMotor: D = 9.4 × 10 4 , n = 197; EGFP-HSETΔTail: D = 0.1 × 10 4 , n = 200. Data are presented as the calculated mean MSD ( y -axis) from two independent experiments over the indicated time intervals ( x -axis) for the indicated n particles ± SEM. d EGFP-HSET in BRB80 + 50 mM KCl was observed in the absence (left) or presence (right) of soluble tubulin and visualized by kymograph ( x -scale bar, distance, 10 µm; y -scale bar, time, 1 min). e Quantification of processive (≥5 s) event frequency as a function of [EGFP-HSET] in the presence (dark green) or absence (light green) of 2 µM tubulin. Data are presented as the number of processive events divided by the total observed MT length multiplied by the observation time for two independent experiments ± SD calculated from N ≥ 10 movies for each condition. Boxes represent first and third quartiles, whiskers represent detection limits, and lines represent median (mean overlaid). f Unlabeled HSET was mixed with 10 nM Cy5-tubulin in BRB80 + 50 mM KCl and observed. Velocities and run lengths of moving Cy5-tubulin particles were determined by kymograph and plotted as histograms. Data are reported as the mean velocity and run length values of n particles from CDF fitting ± the 95% CI from bootstrapping from two independent experiments. g 100 nM Cy5-tubulin (magenta) and 1 nM EGFP-HSET (green) were observed near-simultaneously by high-speed TIRF in BRB80 + 50 mM KCl, and visualized by kymograph ( x -scale bar, distance, 5 µm; y -scale bar, time, 10 s)

    Journal: Nature Communications

    Article Title: Microtubule minus-end aster organization is driven by processive HSET-tubulin clusters

    doi: 10.1038/s41467-018-04991-2

    Figure Lengend Snippet: Soluble (non-MT) tubulin activates processive motility of HSET on single MTs. a Schematic. EGFP-HSET truncations were diluted in P12 buffer and monitored on GMPCPP-stabilized MTs by time-lapse TIRF. b Representative kymographs for time-lapse TIRF images for the indicated constructs at the following concentrations: EGFP-HSET and EGFP-HSETΔMotor, 50 pM. EGFP-HSETΔTail, 250 pM. Distance is on the x -axis (scale bar, 10 µm), and time is on the y -axis (scale bar, 10 s). c Mean-squared displacement (MSD) analysis of particle motion. The reported diffusion constant D is determined from a linear fit over the first 5 s, with the units nm 2 /s: EGFP-HSET: D = 6.3 × 10 4 , n = 206; EGFP-HSETΔMotor: D = 9.4 × 10 4 , n = 197; EGFP-HSETΔTail: D = 0.1 × 10 4 , n = 200. Data are presented as the calculated mean MSD ( y -axis) from two independent experiments over the indicated time intervals ( x -axis) for the indicated n particles ± SEM. d EGFP-HSET in BRB80 + 50 mM KCl was observed in the absence (left) or presence (right) of soluble tubulin and visualized by kymograph ( x -scale bar, distance, 10 µm; y -scale bar, time, 1 min). e Quantification of processive (≥5 s) event frequency as a function of [EGFP-HSET] in the presence (dark green) or absence (light green) of 2 µM tubulin. Data are presented as the number of processive events divided by the total observed MT length multiplied by the observation time for two independent experiments ± SD calculated from N ≥ 10 movies for each condition. Boxes represent first and third quartiles, whiskers represent detection limits, and lines represent median (mean overlaid). f Unlabeled HSET was mixed with 10 nM Cy5-tubulin in BRB80 + 50 mM KCl and observed. Velocities and run lengths of moving Cy5-tubulin particles were determined by kymograph and plotted as histograms. Data are reported as the mean velocity and run length values of n particles from CDF fitting ± the 95% CI from bootstrapping from two independent experiments. g 100 nM Cy5-tubulin (magenta) and 1 nM EGFP-HSET (green) were observed near-simultaneously by high-speed TIRF in BRB80 + 50 mM KCl, and visualized by kymograph ( x -scale bar, distance, 5 µm; y -scale bar, time, 10 s)

    Article Snippet: Diffusion coefficients were calculated using the MSD analyzer MATLAB plugin , where the first 5 s were used for MSD analysis.

    Techniques: Construct, Diffusion-based Assay