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tissue microarray based staining data  (Human Protein Atlas)

 
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    Human Protein Atlas tissue microarray based staining data
    Tissue Microarray Based Staining Data, supplied by Human Protein Atlas, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray-based+assay/data+microarray+tissue/pm41898689-164-18-22
    Average 86 stars, based on 1 article reviews
    tissue microarray based staining data - by Bioz Stars, 2026-09
    86/100 stars

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    Article Title: Resistance to anticancer vaccination effect is controlled by a cancer cell-autonomous phenotype that disrupts immunogenic phagocytic removal
    Article Snippet: In order to increase this coverage, we decided to analyse the publicly available tissue-microarray based immunohistochemistry datasets in the Human Protein Atlas database [ ].

    Article Title: Transcriptomics resources of human tissues and organs.
    Article Snippet: Resource Affiliation Description Link (URL) References Human Protein Atlas Science for Life Lab (Sweden) Tissue-based RNA data based on surgically removed tissues (RNA-Seq) http://www.proteinatlas.org/ (Uhlen et al, 2015) GTEx Broad Institute (USA) Tissue-based RNA data based on postmortem samples (RNA-Seq) http://gtexportal.org/home/ (Keen & Moore, 2015) FANTOM Riken Institute (Japan) Tissue-based RNA data based on CAGE http://fantom.gsc.riken.jp/ (Yu et al, 2015) RNA-Seq Atlas J. Gutenberg University (Germany) A reference database for gene expression profiling in normal tissue by next-generation sequencing http://medicalgenomics.org/ rna_seq_atlas (Krupp et al, 2012) Allen Brain Atlas Allen Institute (USA) An anatomically comprehensive atlas of the adult human brain transcriptome http://human.brain-map.org/ (Hawrylycz et al, 2012) Evolution of gene expression University of Lausanne (Switzerland) The evolution of gene expression levels in mammalian organs http://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE30352 (Brawand et al, 2011) AltIso MIT (USA) Alternative isoform regulation in human tissue transcriptomes. http://www.ncbi.nlm.nih.gov/ geo/query/acc.cgi?acc=GSE12946 (Wang et al, 2008) Expression Atlas EBI (UK) Repository for RNA expression data (both microarray and RNA-Seq) https://www.ebi.ac.uk/gxa (Petryszak et al, 2015) ArrayExpress EBI (UK) International functional genomics public data repositories http://www.ebi.ac.uk/arrayexpress/ (Rustici et al, 2013) Illumina Body Map Illumina (USA) RNA-Seq of 16 human individual tissues http://www.ebi.ac.uk/arrayexpress/ experiments/E-MTAB-513/ (Rustici et al, 2013) Gene Expression Omnibus NCBI (USA) Repository for RNA expression data (both microarray and RNA-Seq) http://www.ncbi.nlm.nih.gov/geo/ (Barrett et al, 2013) Table 2.

    Microarray:

    Article Title: CSF levels of apolipoprotein C1 and autotaxin found to associate with neuropathic pain and fibromyalgia
    Article Snippet: .. A bead microarray was customized and created using 100 antibodies from the Human Protein Atlas project ( www.proteinatlas.org ). ..

    Article Title: <p>CSF levels of apolipoprotein C1 and autotaxin found to associate with neuropathic pain and fibromyalgia</p>
    Article Snippet: .. A bead microarray was customized and created using 100 antibodies from the Human Protein Atlas project (www. proteinatlas.org). ..



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    Cell type specific genes demonstrated at mRNA level. (A) Heat map of genes with cell type specific expression. (B) Heat map of selected genes with endothelial or epithelial cell type specific expression. (C) Immunohistochemistry staining of protein C1orf116 across human tissues showing its epithelial cell type specific expression. The panel shows a magnified view (20×) from tissue microarrays.

    Journal: Nucleic Acids Research

    Article Title: A transcriptomic and proteomic map of primary human cell types

    doi: 10.1093/nar/gkaf1498

    Figure Lengend Snippet: Cell type specific genes demonstrated at mRNA level. (A) Heat map of genes with cell type specific expression. (B) Heat map of selected genes with endothelial or epithelial cell type specific expression. (C) Immunohistochemistry staining of protein C1orf116 across human tissues showing its epithelial cell type specific expression. The panel shows a magnified view (20×) from tissue microarrays.

    Article Snippet: The Human Protein Atlas (HPA) project provided a tissue-based map of the human proteome through transcriptomics and tissue microarray-based immunohistochemistry analysis [ , ].

    Techniques: Expressing, Immunohistochemistry, Staining