ltq fticr mass spectrometer  (Thermo Fisher)


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    Structured Review

    Thermo Fisher ltq fticr mass spectrometer
    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the <t>LTQ-FTICR</t> data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.
    Ltq Fticr Mass Spectrometer, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 88/100, based on 35 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ltq fticr mass spectrometer/product/Thermo Fisher
    Average 88 stars, based on 35 article reviews
    Price from $9.99 to $1999.99
    ltq fticr mass spectrometer - by Bioz Stars, 2020-05
    88/100 stars

    Images

    1) Product Images from "A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra"

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra

    Journal: Proteomics

    doi: 10.1002/pmic.200800282

    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.
    Figure Legend Snippet: Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.

    Techniques Used: Mass Spectrometry, Labeling

    ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.
    Figure Legend Snippet: ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.

    Techniques Used: Mass Spectrometry

    2) Product Images from "A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra"

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra

    Journal: Proteomics

    doi: 10.1002/pmic.200800282

    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.
    Figure Legend Snippet: Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.

    Techniques Used: Mass Spectrometry, Labeling

    ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.
    Figure Legend Snippet: ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.

    Techniques Used: Mass Spectrometry

    3) Product Images from "A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra"

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra

    Journal: Proteomics

    doi: 10.1002/pmic.200800282

    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.
    Figure Legend Snippet: Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.

    Techniques Used: Mass Spectrometry, Labeling

    ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.
    Figure Legend Snippet: ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.

    Techniques Used: Mass Spectrometry

    4) Product Images from "A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra"

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra

    Journal: Proteomics

    doi: 10.1002/pmic.200800282

    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.
    Figure Legend Snippet: Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.

    Techniques Used: Mass Spectrometry, Labeling

    ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.
    Figure Legend Snippet: ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.

    Techniques Used: Mass Spectrometry

    5) Product Images from "A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra"

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra

    Journal: Proteomics

    doi: 10.1002/pmic.200800282

    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.
    Figure Legend Snippet: Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.

    Techniques Used: Mass Spectrometry, Labeling

    ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.
    Figure Legend Snippet: ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.

    Techniques Used: Mass Spectrometry

    Related Articles

    Flow Cytometry:

    Article Title: In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates Novel Metabolic and Regulatory Functions of Peroxisomes 1In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates Novel Metabolic and Regulatory Functions of Peroxisomes 1 [W]In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates N
    Article Snippet: .. The bound peptides were then eluted onto a Waters BEH C18 nanoAcquity column (1.7 μ m, 100 μ m × 100 mm) and eluted over 120 min with a gradient of 5% B to 90% B in 103 min using a Waters nanoAcquity UPLC system (buffer A = 99.9% water/0.1% formic acid, buffer B = 99.9% acetonitrile/0.1% formic acid) into a ThermoFisher LTQ-FTICR mass spectrometer ( ) at a flow rate of 300 nL min−1 . .. Survey scans were taken in the Fourier transformation at 25,000 resolution at a mass-to-charge ratio of 400, and the top 10 ions in each survey scan were then subjected to automatic low-energy collision-induced dissociation in the LTQ-FTICR mass spectrometer.

    Mass Spectrometry:

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra
    Article Snippet: .. The hierarchical MS2 /MS3 database search algorithm was evaluated by searching two data sets for tryptic digests of α-Casein from an LCQ Deca XP mass spectrometer and a LTQ-FTICR mass spectrometer. ..

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra
    Article Snippet: .. In other words, both precursor and product ions of MS3 spectra were measured with low mass accuracy even on the LTQ-FTICR mass spectrometer. ..

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra
    Article Snippet: .. Receiver operating characteristic analysis showed that the hierarchical MS2 /MS3 database search improved sensitivitiesties and specificities for phosphopeptides, especially for the data collect on an LTQ-FTICR mass spectrometer. ..

    Article Title: In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates Novel Metabolic and Regulatory Functions of Peroxisomes 1In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates Novel Metabolic and Regulatory Functions of Peroxisomes 1 [W]In-Depth Proteome Analysis of Arabidopsis Leaf Peroxisomes Combined with in Vivo Subcellular Targeting Verification Indicates N
    Article Snippet: .. The bound peptides were then eluted onto a Waters BEH C18 nanoAcquity column (1.7 μ m, 100 μ m × 100 mm) and eluted over 120 min with a gradient of 5% B to 90% B in 103 min using a Waters nanoAcquity UPLC system (buffer A = 99.9% water/0.1% formic acid, buffer B = 99.9% acetonitrile/0.1% formic acid) into a ThermoFisher LTQ-FTICR mass spectrometer ( ) at a flow rate of 300 nL min−1 . .. Survey scans were taken in the Fourier transformation at 25,000 resolution at a mass-to-charge ratio of 400, and the top 10 ions in each survey scan were then subjected to automatic low-energy collision-induced dissociation in the LTQ-FTICR mass spectrometer.

    Article Title: Myosin VI in the nucleus of neurosecretory PC12 cells: Stimulation-dependent nuclear translocation and interaction with nuclear proteins *
    Article Snippet: .. The column outlet was coupled directly to the ion source of LTQ FTICR mass spectrometer (Thermo Electron Corp., Cat. No 13437) working in the regime of data-dependent MS to MS/MS switch. ..

    Article Title: Online Nanoflow RP-RP-MS Reveals Dynamics of Multi-component Ku Complex in Response to DNA Damage
    Article Snippet: .. Proteomics on a thermo finnigan LTQ-FTICR mass spectrometer. ..

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra
    Article Snippet: .. [ ] The resulted peptides were identified by use of data-dependent LC-MS3 on a LCQ Deca XP ion trap and a LTQ-FTICR mass spectrometer (Thermo Fisher, San Jose, CA, USA). .. 2.0 μL of enriched peptides with a total concentration of 1.0 μg/μL before enrichment was injected into the LC-MS system and eluted off the capillary HPLC column into the mass spectrometer with a linear gradient of 5% – 50% of mobile phase B over 28 minutes at a overall flow rate of ~250 nL/min.

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra
    Article Snippet: .. For high mass accuracy data collected on the LTQ-FTICR mass spectrometer, isotope distributions for the precursor ions of the MS2 spectra were deconvoluted to obtain the charges and monoisotopic m/z values of the precursor ions by use of ReAdW. ..

    Tandem Mass Spectroscopy:

    Article Title: Myosin VI in the nucleus of neurosecretory PC12 cells: Stimulation-dependent nuclear translocation and interaction with nuclear proteins *
    Article Snippet: .. The column outlet was coupled directly to the ion source of LTQ FTICR mass spectrometer (Thermo Electron Corp., Cat. No 13437) working in the regime of data-dependent MS to MS/MS switch. ..

    Similar Products

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  • 88
    Thermo Fisher ltq fticr mass spectrometer
    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the <t>LTQ-FTICR</t> data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.
    Ltq Fticr Mass Spectrometer, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 88/100, based on 36 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/ltq fticr mass spectrometer/product/Thermo Fisher
    Average 88 stars, based on 36 article reviews
    Price from $9.99 to $1999.99
    ltq fticr mass spectrometer - by Bioz Stars, 2020-05
    88/100 stars
      Buy from Supplier

    Image Search Results


    Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.

    Journal: Proteomics

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra

    doi: 10.1002/pmic.200800282

    Figure Lengend Snippet: Score distributions of TPs and FPs in the hierarchical MS 2 /MS 3 searches and the searches of MS 2 data only: (a) all the peptide matches returned for the LCQ data set, (b) all the peptide matches returned for the LTQ-FTICR data set, (c) phospopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set. The score distributions for TPs were split into two groups as labeled “1” and “2”.

    Article Snippet: For high mass accuracy data collected on the LTQ-FTICR mass spectrometer, isotope distributions for the precursor ions of the MS2 spectra were deconvoluted to obtain the charges and monoisotopic m/z values of the precursor ions by use of ReAdW.

    Techniques: Mass Spectrometry, Labeling

    ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.

    Journal: Proteomics

    Article Title: A Hierarchical MS2/MS3 Database Search Algorithm for Automated Analysis of Phosphopeptide Tandem Mass Spectra

    doi: 10.1002/pmic.200800282

    Figure Lengend Snippet: ROC analysis of search results from the hierarchical MS 2 /MS 3 searches in MassMatrix and two stage MS 2 /MS 3 searches in MassMatrix, Mascot and X!Tandem for a tryptic of αCasein: (a) all the peptide matches for the LCQ data set, (b) all the peptide matches for the LTQ-FTICR data set, (c) phosphopeptide matches for the LCQ data set, and (d) phosphopeptide matches for the LTQ-FTICR data set.

    Article Snippet: For high mass accuracy data collected on the LTQ-FTICR mass spectrometer, isotope distributions for the precursor ions of the MS2 spectra were deconvoluted to obtain the charges and monoisotopic m/z values of the precursor ions by use of ReAdW.

    Techniques: Mass Spectrometry

    Examples of high resolution MS/MS analysis confirming the identities of cross-linked peptides. A, LTQ-FTICR CID spectrum of precursor ion 641.0813 [M + 5H] 5+ confirming the cross-link between Q FTSSTSYNR and MADEAGSEADHEGTHST K R. B, LTQ-FTICR CID spectrum

    Journal: The Journal of Biological Chemistry

    Article Title: Identification of Respective Lysine Donor and Glutamine Acceptor Sites Involved in Factor XIIIa-catalyzed Fibrin ? Chain Cross-linking

    doi: 10.1074/jbc.M111.297119

    Figure Lengend Snippet: Examples of high resolution MS/MS analysis confirming the identities of cross-linked peptides. A, LTQ-FTICR CID spectrum of precursor ion 641.0813 [M + 5H] 5+ confirming the cross-link between Q FTSSTSYNR and MADEAGSEADHEGTHST K R. B, LTQ-FTICR CID spectrum

    Article Snippet: Peptide mixtures of digested fibrin under different conditions were analyzed by a reverse phase nano-HPLC coupled to a LTQ-FTICR hybrid mass spectrometer (LTQ-FT Ultra, ThermoFisher).

    Techniques: Mass Spectrometry