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Phylogenetic trees based on the IBV genome and individual genes. Phylogenetic trees were generated with the MEGA 7.0 software by using maximum likelihood method with 1000 bootstrap replicates. The isolates in this study were marked with solid red circles.

Journal: Poultry Science

Article Title: Pathogen identification and analysis of broiler bronchial obstruction syndrome using high-throughput sequencing technology

doi: 10.1016/j.psj.2026.107032

Figure Lengend Snippet: Phylogenetic trees based on the IBV genome and individual genes. Phylogenetic trees were generated with the MEGA 7.0 software by using maximum likelihood method with 1000 bootstrap replicates. The isolates in this study were marked with solid red circles.

Article Snippet: The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

Techniques: Generated, Software

Phylogenetic tree based on the IBV S1 gene. Phylogenetic tree was generated with the MEGA 7.0 software by using maximum likelihood method with 1000 bootstrap replicates. The isolates in this study were marked with solid red circles.

Journal: Poultry Science

Article Title: Pathogen identification and analysis of broiler bronchial obstruction syndrome using high-throughput sequencing technology

doi: 10.1016/j.psj.2026.107032

Figure Lengend Snippet: Phylogenetic tree based on the IBV S1 gene. Phylogenetic tree was generated with the MEGA 7.0 software by using maximum likelihood method with 1000 bootstrap replicates. The isolates in this study were marked with solid red circles.

Article Snippet: The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

Techniques: Generated, Software

Recombination analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

Journal: Poultry Science

Article Title: Pathogen identification and analysis of broiler bronchial obstruction syndrome using high-throughput sequencing technology

doi: 10.1016/j.psj.2026.107032

Figure Lengend Snippet: Recombination analysis of CK/CH/HBBD/BD6 and CK/CH/HBBD/BD3. The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

Article Snippet: The genomic characteristics of IBV and the whole-genome recombination analysis were conducted using the Simplot software for Bootscan analysis (window size: 200 bp, step size: 20 bp).

Techniques: Software