genome sequenced t denticola atcc 35405t strain  (ATCC)


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    Structured Review

    ATCC genome sequenced t denticola atcc 35405t strain
    Genome Sequenced T Denticola Atcc 35405t Strain, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome sequenced t denticola atcc 35405t strain/product/ATCC
    Average 92 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    genome sequenced t denticola atcc 35405t strain - by Bioz Stars, 2020-04
    92/100 stars

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    Sequencing:

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains
    Article Snippet: The others are single-copy CDSs, which correspond to the following three loci in the genome-sequenced T. denticola ATCC 35405T strain: pyrH (TDE2085; 696 bp), flaA (TDE1712; 1,050 bp), and recA (TDE0872; 1,245 bp) ( ). .. We were able to obtain full-length gene sequence data for flaA , recA , and pyrH from 36 oral phylogroup 1 and 2 strains by searching the publically accessible nucleotide sequence depositories.

    Polymerase Chain Reaction:

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains
    Article Snippet: The others are single-copy CDSs, which correspond to the following three loci in the genome-sequenced T. denticola ATCC 35405T strain: pyrH (TDE2085; 696 bp), flaA (TDE1712; 1,050 bp), and recA (TDE0872; 1,245 bp) ( ). .. Using these data, various sets of PCR primers were designed to amplify full-length flaA , recA , and pyrH gene sequences from phylogroup 1 and 2 oral treponeme strains (summarized in ).

    Homologous Recombination:

    Article Title: Multilocus Sequence Analysis of Phylogroup 1 and 2 Oral Treponeme Strains
    Article Snippet: The recA gene encodes the main DNA homologous recombination and repair protein in bacteria, recombinase A ( ). .. The others are single-copy CDSs, which correspond to the following three loci in the genome-sequenced T. denticola ATCC 35405T strain: pyrH (TDE2085; 696 bp), flaA (TDE1712; 1,050 bp), and recA (TDE0872; 1,245 bp) ( ).

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    ATCC t denticola strain atcc 35405
    Circular representation of the T. pedis T A4 genome and complete genome alignment with T. <t>denticola</t> . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola <t>ATCC</t> 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.
    T Denticola Strain Atcc 35405, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/t denticola strain atcc 35405/product/ATCC
    Average 99 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    t denticola strain atcc 35405 - by Bioz Stars, 2020-04
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    92
    ATCC genome sequenced t denticola atcc 35405t strain
    Circular representation of the T. pedis T A4 genome and complete genome alignment with T. <t>denticola</t> . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola <t>ATCC</t> 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.
    Genome Sequenced T Denticola Atcc 35405t Strain, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/genome sequenced t denticola atcc 35405t strain/product/ATCC
    Average 92 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    genome sequenced t denticola atcc 35405t strain - by Bioz Stars, 2020-04
    92/100 stars
      Buy from Supplier

    Image Search Results


    Circular representation of the T. pedis T A4 genome and complete genome alignment with T. denticola . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola ATCC 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.

    Journal: PLoS ONE

    Article Title: Genome-Wide Relatedness of Treponema pedis, from Gingiva and Necrotic Skin Lesions of Pigs, with the Human Oral Pathogen Treponema denticola

    doi: 10.1371/journal.pone.0071281

    Figure Lengend Snippet: Circular representation of the T. pedis T A4 genome and complete genome alignment with T. denticola . (A.) Circular representation of the T. pedis T A4 genome. The CDSs are shown in violet where the outer circle represents predictions on the plus strand and the second circle those on the minus strand. CDSs with a best BLASTP hit in T. denticola ATCC 35405 are colored red and shown in the third circle. The fourth circle represents genes with best BLASTP hits in T. brennaborense (black), F. nucleatum (green), F. alocis (blue) and T. succinifaciens (grey). G+C skew is drawn in the inner circle. (B.) Complete genome alignment between T. pedis T A4 and T. denticola ATCC 35405. Dots represent maximum unique matches (MUMs) between the genomes. MUMs oriented in the same direction are depicted as red dots and reverse complemented MUMs are depicted as blue dots.

    Article Snippet: The genome sequence of T. denticola strain ATCC 35405 was released in 2004 , providing a resource for identifying virulence factors.

    Techniques: