Journal: PLoS ONE

Article Title: Effects of Introduced and Indigenous Viruses on Native Plants: Exploring Their Disease Causing Potential at the Agro-Ecological Interface

doi: 10.1371/journal.pone.0091224

Figure Lengend Snippet: Introduced and indigenous viruses used: classifications, modes of transmission, host specificities and isolates.

Article Snippet: Bean yellow mosaic virus (BYMV) , FB1 , Vicia faba cv. Fiord (faba bean) , BYMV , DSMZ.

Techniques: Transmission Assay

Journal: PLoS ONE

Article Title: Effects of Introduced and Indigenous Viruses on Native Plants: Exploring Their Disease Causing Potential at the Agro-Ecological Interface

doi: 10.1371/journal.pone.0091224

Figure Lengend Snippet: Introduced and indigenous viruses used: culture hosts for each isolate and antibodies for detection.

Article Snippet: Bean yellow mosaic virus (BYMV) , FB1 , Vicia faba cv. Fiord (faba bean) , BYMV , DSMZ.

Techniques:

Journal: PLoS ONE

Article Title: Effects of Introduced and Indigenous Viruses on Native Plants: Exploring Their Disease Causing Potential at the Agro-Ecological Interface

doi: 10.1371/journal.pone.0091224

Figure Lengend Snippet: Introduced and indigenous viruses used: classifications, modes of transmission, host specificities and isolates.

Article Snippet: Bean yellow mosaic virus (BYMV) , FB1 , Vicia faba cv. Fiord (faba bean) , BYMV , DSMZ.

Techniques: Transmission Assay

Journal: PLoS ONE

Article Title: Effects of Introduced and Indigenous Viruses on Native Plants: Exploring Their Disease Causing Potential at the Agro-Ecological Interface

doi: 10.1371/journal.pone.0091224

Figure Lengend Snippet: Introduced and indigenous viruses used: culture hosts for each isolate and antibodies for detection.

Article Snippet: Bean yellow mosaic virus (BYMV) , FB1 , Vicia faba cv. Fiord (faba bean) , BYMV , DSMZ.

Techniques:

Journal: PLoS ONE

Article Title: Plant Virology and Next Generation Sequencing: Experiences with a Potyvirus

doi: 10.1371/journal.pone.0104580

Figure Lengend Snippet: The alignments were generated in MEGA 5.2.1 using ClustalW and tree branches were bootstrapped with 1000 replications. The trees were rooted with a sequence of Clover yellow vein virus (ClYVV), the closest relative to BYMV. New isolates from this study shown in grey, isolates obtained from Lupinus angustifolius plants with BPS are denoted by *, and isolates with genomes designated as “draft” are denoted by +. a) Complete coding regions of BYMV genomes, including draft sequences, with isolates retrieved from Genbank. b) The same sequences as in a) but with draft sequences removed from the analysis.

Article Snippet: Twenty two BYMV and one ClYVV sample were sent for NGS on an Illumina HiSeq 2000 ( ).

Techniques: Generated, Sequencing

Journal: PLoS ONE

Article Title: Plant Virology and Next Generation Sequencing: Experiences with a Potyvirus

doi: 10.1371/journal.pone.0104580

Figure Lengend Snippet: The alignments were generated in MEGA 5.2.1 using ClustalW and tree branches were bootstrapped with 1000 replications. The trees were rooted with a sequence of Clover yellow vein virus (ClYVV), the closest relative to BYMV. New isolates from this study shown in grey, isolates obtained from Lupinus angustifolius plants with BPS are denoted by *, and isolates with genomes designated as “draft” are denoted by +. a) Complete coding regions of BYMV genomes, including draft sequences, with isolates retrieved from Genbank. b) The same sequences as in a) but with draft sequences removed from the analysis.

Article Snippet: When one Clover yellow vein virus (ClYVV) (genus Potyvirus ) and 22 BYMV isolates were sequenced on the Illumina HiSeq2000, one new ClYVV and 23 new BYMV sequences were obtained.

Techniques: Generated, Sequencing