anti phospho her2 (Cell Signaling Technology Inc)


Structured Review

Anti Phospho Her2, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/anti phospho her2/product/Cell Signaling Technology Inc
Average 96 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "Collectin-11 promotes cancer cell proliferation and tumor growth"
Article Title: Collectin-11 promotes cancer cell proliferation and tumor growth
Journal: JCI Insight
doi: 10.1172/jci.insight.159452

Figure Legend Snippet: Based on our findings and literature interpretation, we propose that CL-11 in the tumor (locally synthesized and circulation derived) can contribute to melanoma tumor growth via 2 pathways: (a) CL-11–induced activation of mitogenic kinase signaling and stimulation of tumor cell proliferation, possibly through interaction with ErbB receptors (e.g., EGFR, HER2) on melanoma cells, and(b) CL-11–dependent promotion of immunosuppressive TME, characterized by a high proportion of myeloid cells and a low proportion of lymphocytes, lack of cytotoxic T cell infiltrating in the tumor core, increased angiogenesis, low levels of intratumor expression of cytokines/chemokines with antitumor properties (e.g., Ifng, Nos2, Il12, Ccl5, Cxcl9 ), and MΦ reprogramming to a M2 phenotype.
Techniques Used: Synthesized, Derivative Assay, Activation Assay, Expressing
phospho her2 erbb2 antibody (Cell Signaling Technology Inc)


Structured Review

Phospho Her2 Erbb2 Antibody, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/phospho her2 erbb2 antibody/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "A living biobank of patient-derived ductal carcinoma in situ mouse-intraductal xenografts identifies risk factors for invasive progression"
Article Title: A living biobank of patient-derived ductal carcinoma in situ mouse-intraductal xenografts identifies risk factors for invasive progression
Journal: Cancer Cell
doi: 10.1016/j.ccell.2023.04.002

Figure Legend Snippet: A living biobank of MIND-PDX models of DCIS retaining histological and molecular features of primary lesions (A) Schematic overview of the generation and characterization of 130 MIND-PDX models of DCIS. (B) Pie chart of the grade distribution of the primary DCIS lesions. (C) Pie chart of the DCIS take rate in MIND-PDX models. (D) Examples of H&E-stained sections of the different growth patterns observed in primary DCIS lesions (top row) or DCIS-MIND outgrowths (middle row). Bottom row: human-specific Ku80 staining showing that DCIS-MIND outgrowths have a human origin. (E) Distribution of growth patterns of primary DCIS lesions and the corresponding DCIS-MIND outgrowths. A black line indicates concordance between primary and PDX, whereas an orange line indicates a discordance between primary and PDX. (F) Growth pattern analyses between an early (3–6 months) and late (12 months) time points. (G) Examples of immunohistochemistry for ER, PR, HER2, and Ki67 expression in DCIS-MIND lesions (top row) vs. matched primary DCIS lesions (bottom row). (H) Distribution of molecular subtypes (luminal A: ER + , PR +/− , HER2 − , Ki67 < 20%; luminal B: ER + , PR +/− , HER2 – , Ki67 ≥ 20%; HER2 + : ER +/− , PR +/− , and HER2 + ; basal: ER − , PR − , HER2 − ) of primary DCIS lesions and the corresponding DCIS-MIND lesions. A black line indicates concordance between primary and PDX, whereas an orange line indicates a discordance between primary and PDX. See also
Techniques Used: Staining, Immunohistochemistry, Expressing

Figure Legend Snippet: DCIS-MIND models retain mutational and transcriptional features of the primary DCIS lesions (A) Oncoprint showing the mutational landscape of the primary DCIS lesions, including amplifications, single-nucleotide variants, and insertion-deletions (indels) for the top mutated genes in our breast cancer gene panel. Annotations for each model includes ER, PR, and HER2 status. (B) Oncoprint showing amplifications, single-nucleotide variants, and insertion-deletions (indels) in cancer genes in primary DCIS lesions and corresponding DCIS-MIND lesions for the top mutated genes. (C) Unsupervised clustering of DCIS-MIND lesions based on PAM50 genes, showing clustering of luminal, HER2 + , and basal-like DCIS lesions. Annotations include origin (primary or PDX) and molecular subtype based on PAM50 or IHC. (D) Unsupervised clustering of DCIS-MIND lesions based on 90 informative genes resulting in three DCIS subtypes proposed by Strand et al. See also
Techniques Used:

Figure Legend Snippet: Comparison of clinical biomarkers related to invasive progression of DCIS (A) Whole-mount analysis (top row), H&E staining (middle row), and human-specific Ku80 staining (bottom row) of DCIS-MIND lesions showing non-invasive growth (left panel) or invasive growth (right panel). Cells of human origin are marked with Ku80 (green), myoepithelial cells are marked with alpha-smooth muscle actin (αSMA) (magenta). Blue arrows/circles indicate invasive cells. (B) Pie chart of the percentage of DCIS-MIND lesions with non-invasive growth, micro-invasion, or invasive progression. (C) Odds ratio table showing risk scores (univariate and multivariate linear regression models) for association between common clinical parameters, DCIS subtypes as proposed by Strand et al., and multiple invasive recurrence classifiers for invasive progression of DCIS-MIND lesions, identifying HER2 overexpression and solid growth patterns as independent risk factors. Molecular subtype and growth pattern parameters are based on DCIS-MIND characteristics while the other parameters are based on patient characteristics. See also
Techniques Used: Staining, Over Expression

Figure Legend Snippet: HER2 overexpression is a driver for invasive progression of DCIS (A) Representative IHC images of p-ERK and p-AKT. (B) Plotted H scores for p-ERK and p-AKT expression in HER2 + DCIS and HER2 – DCIS controls. (C) Tumor-free survival curves of responsive HER2 + DCIS models treated with vehicle (C) or herceptin (T) with log rank test. ∗∗∗p < 0.001, ∗∗p < 0.01, ∗p < 0.05. (D) Tumor-free survival curves of non-responsive HER2 + DCIS models treated with vehicle (C) or herceptin (T) with log rank test. ∗∗∗p < 0.001, ∗∗p < 0.01, ∗p < 0.05. (E) Representative whole-mount images and Ku80-stained sections of DCIS-injected mammary glands from DCIS063 mice treated with vehicle (left panels) or herceptin (right panels). (F) Schematic representation of the experimental setup for lentiviral overexpression of HER2 in HER2 – DCIS cells. (G) Western blot showing expression of HER2 and phospho-HER2 in parental 293T cells and 293T cells transduced with the HER2-GFP lentivirus. (H) Representative whole-mount images of intraductally injected mammary glands, showing non-invasive replacement growth of non-transduced HER2 – DCIS cells (left panel) and invasive expansive growth of the same DCIS cells transduced with the HER2-GFP lentivirus (right panel). Inset shows lesion without αSMA marker indicating GFP expression (green). Cells of human origin are marked with Ku80 (gray), myoepithelial cells are marked with αSMA (magenta). Inset shows lesion without αSMA marker indicating HER2-GFP expression (green). See also
Techniques Used: Over Expression, Expressing, Staining, Injection, Western Blot, Transduction, Marker

Figure Legend Snippet:
Techniques Used: Labeling, Recombinant, Electron Microscopy, Plasmid Preparation, Blocking Assay, Software
her2 erbb2 rabbit mab (Cell Signaling Technology Inc)


Structured Review

Her2 Erbb2 Rabbit Mab, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/her2 erbb2 rabbit mab/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "A living biobank of patient-derived ductal carcinoma in situ mouse-intraductal xenografts identifies risk factors for invasive progression"
Article Title: A living biobank of patient-derived ductal carcinoma in situ mouse-intraductal xenografts identifies risk factors for invasive progression
Journal: Cancer Cell
doi: 10.1016/j.ccell.2023.04.002

Figure Legend Snippet: A living biobank of MIND-PDX models of DCIS retaining histological and molecular features of primary lesions (A) Schematic overview of the generation and characterization of 130 MIND-PDX models of DCIS. (B) Pie chart of the grade distribution of the primary DCIS lesions. (C) Pie chart of the DCIS take rate in MIND-PDX models. (D) Examples of H&E-stained sections of the different growth patterns observed in primary DCIS lesions (top row) or DCIS-MIND outgrowths (middle row). Bottom row: human-specific Ku80 staining showing that DCIS-MIND outgrowths have a human origin. (E) Distribution of growth patterns of primary DCIS lesions and the corresponding DCIS-MIND outgrowths. A black line indicates concordance between primary and PDX, whereas an orange line indicates a discordance between primary and PDX. (F) Growth pattern analyses between an early (3–6 months) and late (12 months) time points. (G) Examples of immunohistochemistry for ER, PR, HER2, and Ki67 expression in DCIS-MIND lesions (top row) vs. matched primary DCIS lesions (bottom row). (H) Distribution of molecular subtypes (luminal A: ER + , PR +/− , HER2 − , Ki67 < 20%; luminal B: ER + , PR +/− , HER2 – , Ki67 ≥ 20%; HER2 + : ER +/− , PR +/− , and HER2 + ; basal: ER − , PR − , HER2 − ) of primary DCIS lesions and the corresponding DCIS-MIND lesions. A black line indicates concordance between primary and PDX, whereas an orange line indicates a discordance between primary and PDX. See also
Techniques Used: Staining, Immunohistochemistry, Expressing

Figure Legend Snippet: DCIS-MIND models retain mutational and transcriptional features of the primary DCIS lesions (A) Oncoprint showing the mutational landscape of the primary DCIS lesions, including amplifications, single-nucleotide variants, and insertion-deletions (indels) for the top mutated genes in our breast cancer gene panel. Annotations for each model includes ER, PR, and HER2 status. (B) Oncoprint showing amplifications, single-nucleotide variants, and insertion-deletions (indels) in cancer genes in primary DCIS lesions and corresponding DCIS-MIND lesions for the top mutated genes. (C) Unsupervised clustering of DCIS-MIND lesions based on PAM50 genes, showing clustering of luminal, HER2 + , and basal-like DCIS lesions. Annotations include origin (primary or PDX) and molecular subtype based on PAM50 or IHC. (D) Unsupervised clustering of DCIS-MIND lesions based on 90 informative genes resulting in three DCIS subtypes proposed by Strand et al. See also
Techniques Used:

Figure Legend Snippet: Comparison of clinical biomarkers related to invasive progression of DCIS (A) Whole-mount analysis (top row), H&E staining (middle row), and human-specific Ku80 staining (bottom row) of DCIS-MIND lesions showing non-invasive growth (left panel) or invasive growth (right panel). Cells of human origin are marked with Ku80 (green), myoepithelial cells are marked with alpha-smooth muscle actin (αSMA) (magenta). Blue arrows/circles indicate invasive cells. (B) Pie chart of the percentage of DCIS-MIND lesions with non-invasive growth, micro-invasion, or invasive progression. (C) Odds ratio table showing risk scores (univariate and multivariate linear regression models) for association between common clinical parameters, DCIS subtypes as proposed by Strand et al., and multiple invasive recurrence classifiers for invasive progression of DCIS-MIND lesions, identifying HER2 overexpression and solid growth patterns as independent risk factors. Molecular subtype and growth pattern parameters are based on DCIS-MIND characteristics while the other parameters are based on patient characteristics. See also
Techniques Used: Staining, Over Expression

Figure Legend Snippet: HER2 overexpression is a driver for invasive progression of DCIS (A) Representative IHC images of p-ERK and p-AKT. (B) Plotted H scores for p-ERK and p-AKT expression in HER2 + DCIS and HER2 – DCIS controls. (C) Tumor-free survival curves of responsive HER2 + DCIS models treated with vehicle (C) or herceptin (T) with log rank test. ∗∗∗p < 0.001, ∗∗p < 0.01, ∗p < 0.05. (D) Tumor-free survival curves of non-responsive HER2 + DCIS models treated with vehicle (C) or herceptin (T) with log rank test. ∗∗∗p < 0.001, ∗∗p < 0.01, ∗p < 0.05. (E) Representative whole-mount images and Ku80-stained sections of DCIS-injected mammary glands from DCIS063 mice treated with vehicle (left panels) or herceptin (right panels). (F) Schematic representation of the experimental setup for lentiviral overexpression of HER2 in HER2 – DCIS cells. (G) Western blot showing expression of HER2 and phospho-HER2 in parental 293T cells and 293T cells transduced with the HER2-GFP lentivirus. (H) Representative whole-mount images of intraductally injected mammary glands, showing non-invasive replacement growth of non-transduced HER2 – DCIS cells (left panel) and invasive expansive growth of the same DCIS cells transduced with the HER2-GFP lentivirus (right panel). Inset shows lesion without αSMA marker indicating GFP expression (green). Cells of human origin are marked with Ku80 (gray), myoepithelial cells are marked with αSMA (magenta). Inset shows lesion without αSMA marker indicating HER2-GFP expression (green). See also
Techniques Used: Over Expression, Expressing, Staining, Injection, Western Blot, Transduction, Marker

Figure Legend Snippet:
Techniques Used: Labeling, Recombinant, Electron Microscopy, Plasmid Preparation, Blocking Assay, Software
anti her2 erbb2 antibody (Cell Signaling Technology Inc)


Structured Review

Anti Her2 Erbb2 Antibody, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/anti her2 erbb2 antibody/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "CRISPR-clear imaging of melanin-rich B16-derived solid tumors"
Article Title: CRISPR-clear imaging of melanin-rich B16-derived solid tumors
Journal: Communications Biology
doi: 10.1038/s42003-023-04614-7

Figure Legend Snippet: a Comparison of antibody labeling of intact melanin (+/–) tumors. HER2 is detected with an anti-HER2 antibody and stained with an Alexa-488 labeled secondary antibody (shown in white), tdTomato-expressing B16 cells (shown in purple), imaged at increasing depths. Images were acquired using a 25x objective. Scale bar 150 μm (yellow). b Overview of workflow for 3D imaging, localization and visualization of nanoparticles in melanin(–) tumors. The method consists of 2 modular steps: (1) multi-dye vessel-staining (highlighted in Fig. ) and injection of nanoparticles in tissue, and (2) clearing for high imaging quality using 3D confocal microscopy. For clarity, separate channels are shown for nanoparticles (Alexa 488), tdTomato-expressing melanin(–) B16 melanoma cells and vasculature (Alexa 647). Scale bar 300 μm. A 10x/0.45 objective was used for imaging. c 3D visualization of digital reconstruction of nanoparticles at 500 µm depth of melanin(–) tumors cleared with PACT . Purple is vasculature, cyan are reconstructed tdTomato-expressing melanin(–) B16 melanoma cells, and green represents nanoparticles. Scale bar 300 μm. White box insert on the left is a blow-up of the box on the right. Scale bar 20 μm for insert. A 10x/0.45 objective was used for imaging.
Techniques Used: Antibody Labeling, Staining, Labeling, Expressing, Imaging, Injection, Confocal Microscopy
phospho her2 erbb2 tyr1221 1222 (Cell Signaling Technology Inc)


Structured Review
Phospho Her2 Erbb2 Tyr1221 1222, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/phospho her2 erbb2 tyr1221 1222/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
her2 erbb2 (Cell Signaling Technology Inc)


Structured Review
Her2 Erbb2, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/her2 erbb2/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
anti-phospho-her2/erbb2 y122 (Cell Signaling Technology Inc)


Structured Review
Anti Phospho Her2/Erbb2 Y122, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/anti-phospho-her2/erbb2 y122/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
anti her2 erbb2 (Cell Signaling Technology Inc)


Structured Review

Anti Her2 Erbb2, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/anti her2 erbb2/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "Anticancer effect of zanubrutinib in HER2-positive breast cancer cell lines"
Article Title: Anticancer effect of zanubrutinib in HER2-positive breast cancer cell lines
Journal: Investigational New Drugs
doi: 10.1007/s10637-023-01346-7

Figure Legend Snippet: Anticancer effects of BTK inhibitors in breast cancer cell lines
Techniques Used:

Figure Legend Snippet: Effects of BTK inhibitors on signalling pathways in HER2-positive breast cancer cell lines. Compounds were used at a 10 µM concentration for 16 h of treatment. Cells were stimulated by heregulin (HRG, 0.1 µg/mL) 30 min prior to harvesting. β-Actin served as a control for equal loading. The representative results from at least two biological replicates are shown
Techniques Used: Concentration Assay

Figure Legend Snippet: Dose-dependent effect of zanubrutinib in HER2-positive BT474 and SKBR3 cell lines. Cells were treated with increasing concentrations of zanubrutinib for 16 h. Cells were stimulated by heregulin (HRG, 0.1 µg/mL) 30 min prior to harvesting. β-Actin served as a control for equal loading. The representative results from at least two biological replicates are shown
Techniques Used:

Figure Legend Snippet: Heregulin rescues HER2-positive cells from G1 arrest induced by BTK inhibitors. Cells were treated for 24 h with increasing concentrations of the selected compounds, with or without activation by heregulin (HRG, 0.1 µg/ml). Results are averages of biological triplicates, the error bars represent standard deviation
Techniques Used: Activation Assay, Standard Deviation

Figure Legend Snippet: (A) Ibrutinib and zanubrutinib inhibit colony formation in HER2 + SKBR3 cells, while the proliferation rate of HER2- MCF7 cells remains unaffected. Colonies were stained with crystal violet after 10 days of treatment. The numbers indicate the percentages of colonies formed (calculated from the absorbance values, numbers are averages of biological duplicates ± SD). (B) Immunoblot analysis of lysates of cells treated with 1 µM zanubrutinib and ibrutinib. β-Actin served as a control for equal loading. The representative images are shown
Techniques Used: Staining, Western Blot
anti phospho her2 (Cell Signaling Technology Inc)


Structured Review

Anti Phospho Her2, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/anti phospho her2/product/Cell Signaling Technology Inc
Average 96 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "Collectin-11 promotes cancer cell proliferation and tumor growth"
Article Title: Collectin-11 promotes cancer cell proliferation and tumor growth
Journal: JCI Insight
doi: 10.1172/jci.insight.159452

Figure Legend Snippet: Based on our findings and literature interpretation, we propose that CL-11 in the tumor (locally synthesized and circulation derived) can contribute to melanoma tumor growth via 2 pathways: (a) CL-11–induced activation of mitogenic kinase signaling and stimulation of tumor cell proliferation, possibly through interaction with ErbB receptors (e.g., EGFR, HER2) on melanoma cells, and(b) CL-11–dependent promotion of immunosuppressive TME, characterized by a high proportion of myeloid cells and a low proportion of lymphocytes, lack of cytotoxic T cell infiltrating in the tumor core, increased angiogenesis, low levels of intratumor expression of cytokines/chemokines with antitumor properties (e.g., Ifng, Nos2, Il12, Ccl5, Cxcl9 ), and MΦ reprogramming to a M2 phenotype.
Techniques Used: Synthesized, Derivative Assay, Activation Assay, Expressing
anti her2 (Cell Signaling Technology Inc)


Structured Review

Anti Her2, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 95/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/anti her2/product/Cell Signaling Technology Inc
Average 95 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "Collectin-11 promotes cancer cell proliferation and tumor growth"
Article Title: Collectin-11 promotes cancer cell proliferation and tumor growth
Journal: JCI Insight
doi: 10.1172/jci.insight.159452

Figure Legend Snippet: Based on our findings and literature interpretation, we propose that CL-11 in the tumor (locally synthesized and circulation derived) can contribute to melanoma tumor growth via 2 pathways: (a) CL-11–induced activation of mitogenic kinase signaling and stimulation of tumor cell proliferation, possibly through interaction with ErbB receptors (e.g., EGFR, HER2) on melanoma cells, and(b) CL-11–dependent promotion of immunosuppressive TME, characterized by a high proportion of myeloid cells and a low proportion of lymphocytes, lack of cytotoxic T cell infiltrating in the tumor core, increased angiogenesis, low levels of intratumor expression of cytokines/chemokines with antitumor properties (e.g., Ifng, Nos2, Il12, Ccl5, Cxcl9 ), and MΦ reprogramming to a M2 phenotype.
Techniques Used: Synthesized, Derivative Assay, Activation Assay, Expressing
anti her2 erbb2 (Cell Signaling Technology Inc)


Structured Review

Anti Her2 Erbb2, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/anti her2 erbb2/product/Cell Signaling Technology Inc
Average 86 stars, based on 1 article reviews
Price from $9.99 to $1999.99
Images
1) Product Images from "Coupling substrate-trapping with proximity-labeling to identify protein tyrosine phosphatase PTP1B signaling networks"
Article Title: Coupling substrate-trapping with proximity-labeling to identify protein tyrosine phosphatase PTP1B signaling networks
Journal: The Journal of Biological Chemistry
doi: 10.1016/j.jbc.2023.104582

Figure Legend Snippet: Application of PTP1B substrate-trapping proximity-labeling in cell-based models of HER2-positive breast cancer and Herceptin resistance. A , immunofluorescence analysis of BT474 HS or JIMT1 cells transiently expressing BirA ∗ -PTP1B. Scale bar represents 10 μm. B , immunoblot analysis of whole cell lysate (WCL) from BT474 HS or JIMT1 cells transiently expressing empty vector, BirA ∗ , BirA ∗ -PTP1B, or BirA ∗ -PTP1B D181A as indicated, in the presence of 50 μM biotin for 36 h. C and D , immunoblot ( C ) and silver stain ( D ) analysis of streptavidin-enriched proteins from BT474 HS or JIMT1 transiently expressing empty vector, BirA ∗ , BirA ∗ -PTP1B, or BirA ∗ -PTP1B D181A as indicated, in the presence of 50 μM biotin for 36 h. Panels ( C and D ) represent separate experiments. Data are representative of n ≥ 3 independent experiments (biological replicates).
Techniques Used: Labeling, Immunofluorescence, Expressing, Western Blot, Plasmid Preparation, Silver Staining

Figure Legend Snippet: Quantitative analysis of PTP1B substrate-trapping proximity-labeling protein complexes in HER2-positive breast cancer by mass spectrometry-based proteomics. A , volcano plots of streptavidin-enriched proteins from BT474 HS- PTPN1 -K/O#1 ( top ) or JIMT1 ( bottom ) cells transiently expressing sgRNA#1-resistant BirA ∗ -PTP1B D181A as compared to BirA ∗ -PTP1B in the presence of 50 μM biotin for 36 h. Data points represent proteins meeting filtered criteria among individual biological replicates, where enlarged data points represent proteins meeting filtered criteria across n ≥ 3 biological replicates with fold-change ≥2.8 and p -value ≤ 0.0002 (BT474 HS- PTPN1 -K/O#1 ; red ) or n ≥ 2 biological replicates with fold-change ≥2 and p -value ≤ 0.00002 (JIMT1; blue ). Tabulated . B , graphical presentation of proteins meeting filtered criteria among individual experiments (biological replicates) in BT474 HS- PTPN1 -K/O#1 ( top ) or JIMT1 ( bottom ). Venn diagram represents comparison of proteins meeting filtered criteria across n ≥ 3 (BT474 HS- PTPN1 -K/O#1 ; red ) or n ≥ 2 (JIMT1; blue ) biological replicates, to PTP1B protein interactions documented in the BioGRID database ( white ) . Tabulated . C , immunoblot validation of identified targets from streptavidin-enriched proteins of BT474 HS- PTPN1 -K/O#1 or JIMT1 cells transiently expressing empty vector, BirA ∗ , sgRNA#1-resistant BirA ∗ -PTP1B or BirA ∗ -PTP1B D181A as indicated, in the presence of 50 μM biotin for 36 h. D , graphical presentation of proteins meeting filtered criteria across n ≥ 3 (BT474 HS- PTPN1 -K/O#1 ) or n ≥ 2 (JIMT1) biological replicates which have tyrosine phosphorylation (pTyr) sites as identified in the PhosphoSite database ( white ), in BT474 cells as described by Bian et al. ( light gr ay ), in HER2-positive breast cancer patients as described by Krug et al. ( dark gr ay ), or in both studies ( black ) ( , , ). Tabulated . Data are representative of n ≥ 3 independent experiments (biological replicates).
Techniques Used: Labeling, Mass Spectrometry, Expressing, Western Blot, Plasmid Preparation

Figure Legend Snippet: A nalysis of PTP1B substrate-trapping protein complexes in HER2-positive breast cancer and Herceptin resistance. A and B , immunoblot analysis of identified targets in ( A ) whole cell lysates (WCL) or ( B ) tyrosine phosphorylation (pTyr)-enriched lysates from BT474 HS , JIMT1, or BT474 HS- PTPN1 -K/O#1 cells as indicated, under culture conditions used during substrate-trapping proximity-labeling studies. Asterisk denotes control IgG-enriched lysates. C , immunoblot analysis of identified targets in pTyr-enriched and WCL of serum-starved JIMT1 cells treated with or without MSI-1436 for 48 h as indicated, then stimulated with serum-containing media prior to lysis. Data are representative of n = 3 independent experiments (biological replicates).
Techniques Used: Western Blot, Labeling, Lysis