st2957  (ATCC)


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    ATCC st2957
    St2957, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    b dyk 9557 blood  (ATCC)


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    ATCC b dyk 9557 blood
    Details of bacterial isolates used in this study.
    B Dyk 9557 Blood, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "In vitro activity of novel apramycin-dextran nanoparticles and free apramycin against selected Dutch and Pakistani Klebsiella pneumonia isolates"

    Article Title: In vitro activity of novel apramycin-dextran nanoparticles and free apramycin against selected Dutch and Pakistani Klebsiella pneumonia isolates

    Journal: Heliyon

    doi: 10.1016/j.heliyon.2023.e22821


    Figure Legend Snippet: Details of bacterial isolates used in this study.

    Techniques Used: Isolation


    Figure Legend Snippet: Antibiotic sensitivities for 18 Klebsiella pneumoniae isolates (Netherlands and Pakistan) expressing different aminoglycoside antibiotic sensitivity profiles. All isolates were tested in duplicate. If MIC values differed, both results are shown. (S) = Sensitive. (R) = Resistant.

    Techniques Used: Expressing

    st2957  (ATCC)


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    ATCC st2957
    St2957, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    p bivia ccug 9557  (ATCC)


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    ATCC p bivia ccug 9557
    P Bivia Ccug 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    strains 9557  (ATCC)


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    ATCC strains 9557
    Strains 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    bfr ca 9557  (ATCC)


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    ATCC bfr ca 9557
    Bfr Ca 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    b schinkii bt  (ATCC)


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    ATCC b schinkii bt
    B Schinkii Bt, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    candida lambica jcm 9557  (ATCC)


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    ATCC candida lambica jcm 9557
    Candida Lambica Jcm 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    bivia ccug 9557  (ATCC)


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    ATCC bivia ccug 9557
    Bivia Ccug 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    r aurantiacus ncb 9557  (ATCC)


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    ATCC r aurantiacus ncb 9557
    Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.
    R Aurantiacus Ncb 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "Microcosm Enrichment of Biphenyl-Degrading Microbial Communities from Soils and Sediments"

    Article Title: Microcosm Enrichment of Biphenyl-Degrading Microbial Communities from Soils and Sediments

    Journal:

    doi:

    Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.
    Figure Legend Snippet: Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.

    Techniques Used: Amplification, Agarose Gel Electrophoresis, Marker, Molecular Weight

    r aurantiacus ncb 9557  (ATCC)


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    ATCC r aurantiacus ncb 9557
    Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.
    R Aurantiacus Ncb 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "Microcosm Enrichment of Biphenyl-Degrading Microbial Communities from Soils and Sediments"

    Article Title: Microcosm Enrichment of Biphenyl-Degrading Microbial Communities from Soils and Sediments

    Journal:

    doi:

    Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.
    Figure Legend Snippet: Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.

    Techniques Used: Amplification, Agarose Gel Electrophoresis, Marker, Molecular Weight

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  • st2957  (ATCC)
    93
    ATCC st2957
    St2957, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC b dyk 9557 blood
    Details of bacterial isolates used in this study.
    B Dyk 9557 Blood, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC p bivia ccug 9557
    Details of bacterial isolates used in this study.
    P Bivia Ccug 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    86
    ATCC strains 9557
    Details of bacterial isolates used in this study.
    Strains 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC bfr ca 9557
    Details of bacterial isolates used in this study.
    Bfr Ca 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC b schinkii bt
    Details of bacterial isolates used in this study.
    B Schinkii Bt, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC candida lambica jcm 9557
    Details of bacterial isolates used in this study.
    Candida Lambica Jcm 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    ATCC bivia ccug 9557
    Details of bacterial isolates used in this study.
    Bivia Ccug 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    93
    ATCC r aurantiacus ncb 9557
    Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.
    R Aurantiacus Ncb 9557, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Journal: Heliyon

    Article Title: In vitro activity of novel apramycin-dextran nanoparticles and free apramycin against selected Dutch and Pakistani Klebsiella pneumonia isolates

    doi: 10.1016/j.heliyon.2023.e22821

    Figure Lengend Snippet: Details of bacterial isolates used in this study.

    Article Snippet: A collection of eighteen K. pneumoniae was used (comprising the isolates ATCC 13883, B-DYK 9557 (blood), B-DYK 12747 (blood), ESBL-635 (rectum), ESBL-1059 (rectum), R-DYK 3427 (urine), R-DYK 4861(perineum), R-DYK 7926 (rectum) from the Netherlands, and U-546, U-675, U-716, T-467, T-521, T-876, B-137, B-432, B418, B-881 from Pakistan).

    Techniques: Isolation

    Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.

    Journal:

    Article Title: Microcosm Enrichment of Biphenyl-Degrading Microbial Communities from Soils and Sediments

    doi:

    Figure Lengend Snippet: Fingerprint analysis of Rhodococcus cluster 1 core strains and Rhodococcus type strains based on 16S-23S ISR polymorphism. (A) PCR amplified 16S-23S rRNA ISR of cluster 1 core strains (Rhodococcus isolates) and related strains separated in a 1.5% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (B) RFLP analysis of TaqI-digested PCR-amplified ISR of cluster 1 core strains and related strains in a 3.0% agarose gel. Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after TaqI digestion for cluster 1 core strains (Rhodococcus isolates) and their closest relative (R. opacus), showing identical RFLP fingerprints. Lane Mw, 1-kb DNA ladder molecular weight marker; lane 1, R. opacus DSM 427; lane 2, LOX-158b; lane 3, H-131; lane 4, SP-184; lane 5, GT-159; lane 6, ST-215; lane 7, BIE-17; lane 8, GW-86a.

    Article Snippet: Lane Mw, 1-kb DNA ladder molecular size marker; lane 1, R. aurantiacus NCB 9557; lane 2, R. coprophilus DSM 43339; lane 3, R. corallinus DSM 43248; lane 4, R. erythropolis DSM 311; lane 5, R. equi DSM 777; lane 6, R. rhodochrous ATCC 2976; lane 7, R. rubropertinctus DSM 43179; lane 8, R. ruber DSM 43232; lane 9, R. opacus DSM 427; lane 10, LOX-158b; lane 11, H-131; lane 12, SP-184; lane 13, GT-159; lane 14, ST-215; lane 15, BIE-17; lane 16, GW-86a; lane 17, T. wratislaviensis DSM 44107. (C) SSCP analysis of PCR- amplified 16S-23S rRNA ISR after Taq I digestion for cluster 1 core strains ( Rhodococcus isolates) and their closest relative ( R. opacus ), showing identical RFLP fingerprints.

    Techniques: Amplification, Agarose Gel Electrophoresis, Marker, Molecular Weight