Journal: PLoS ONE

Article Title: A Comprehensive Evaluation of Colonic Mucosal Isolates of Sutterella wadsworthensis from Inflammatory Bowel Disease

doi: 10.1371/journal.pone.0027076

Figure Lengend Snippet: Culture media used in the study.

Article Snippet: Twenty-eight other bacterial strains were used in this study, obtained from international culture collections as well as from clinical and environmental sources: Campylobacter jejuni (NCTC 11351), Campylobacter upsaliensis (NCTC 11540), Campylobacter fetus (NCTC 10842), Campylobacter lari (NCTC 11352), Campylobacter coli (clinical isolate), Campylobacter concisus (clinical isolate), Helicobacter pylori (ATCC 700392), Helicobacter hepaticus (ATCC 51449), Helicobacter cholecystitis (ATCC 700242), Helicobacter canis (ATCC 51402), Helicobacter canadensis (ATCC 700968), Escherichia coli (NCIMB 12201), Pseudomonas fluorescences (clinical isolate), Pseudomonas aeruginosa (ATCC 27853), Shigella sonnei (25931 clinical isolate), Proteus mirabilis (NCTC 3177), Proteus vulgaris (NCTC 4157), Salmonella enteritidis (NCTC 12694), Salmonella typhimurium (NCIMB 13284), Staphylococus aureus (NCIMB 12702), Bacillus cereus (ATCC 10876), Enterococcus faecalis (NCIMB 13280), Enterobacter aerogenes (NCIMB 10102), Listeria monocytogenes (clinical isolate), Fusobacterium nucleotum (clinical isolate), Klebsiella pneumonia (NCIMB 13281), Acinetobacter calcoaceticus (clinical isolate), Yersinia fredericksenii (NCIMB 2124), and Aeromonas caviae (clinical isolate).

Techniques:

Journal: PLoS ONE

Article Title: Enterohepatic Helicobacter in Ulcerative Colitis: Potential Pathogenic Entities?

doi: 10.1371/journal.pone.0017184

Figure Lengend Snippet: Classification of named Helicobacter spp. as Gastric or Enterohepatic.

Article Snippet: The bacterial strains used in this study included: Helicobacter bilis (ATCC 51630), H. canadensis (ATCC 700968), H. canis (ATCC 51402), H. cholecystus (ATCC 700242), H. cinaedi (CCUG 18818), H. felis (ATCC 49179), H. hepaticus (ATCC 51449), H. pullorum (NCTC 12824), H. pylori (ATCC 700392), Pseudomonas fluorescens (clinical isolate), Listeria monocytogenes (clinical isolate), Aeromonas caviae (clinical isolate), Aeromonas sobria (clinical isolate), Campylobacter jejuni (clinical isolate), Proteus mirabilis (NCTC 3177), Enterobacter aerogenes (NCIMB 10102), Yersinia enterocolitica (NCIMB 2124), Bifidobacterium longum (NCIMB 8809), Bifidobacterium infantis (DSM 20088), Eubacterium rectale (NCIMB 14373), Roseburia intestinalis (DSM 14610), Bacteroides vulgatus (DSM 1447), Bacteroides thetaiotaomicron (NCTC 10582), Eubacterium hallii (DSM 17630), Enterococcus faecalis (NCIMB 13280), Pseudomonas aeruginosa (NCIMB 8626), Enterobacter cloacae (NCIMB 8556), Proteus vulgaris (NCTC 4175), Salmonella enteritidis (NCTC 12694), Salmonella poona (NCTC 4840), Salmonella typhimurium (NCIMB 13284), Escherichia coli (NCIMB 12210), Shigella sonnei (ATCC 25931), Staphylococcus epidermidis (NCIMB 8853), Bacillus subtilis (NCIB 8054), Bacillus cereus (ATCC 10876), Klebsiella pneumoniae (NCIMB 13281), Staphylococcus aureus (NCIMB 12702), Streptococcus gordonii (ATCC 35105), Faecalibacterium prausnitzii strain A2-165 (DSM 17677), Megasphaera elsdenii (ATCC 25940), Bifidobacterium adolescentis isolate L2-32, Lactococcus lactis strain MG1363, Enterococcus faecalis strain JH2-2, Ruminococcus albus strain SY3, Ruminococcus flavefaciens strain 17, Eubacterium cylindroides strain T2-87, Coprococcus spp L2-50, Methanobrevibacter smithii ATCC 35061, Acinetobacter baumanii , Lactobacillus acidophilus (ATCC 43561) and Streptococcus bovis strain Z6 .

Techniques:

Journal: PLoS ONE

Article Title: Enterohepatic Helicobacter in Ulcerative Colitis: Potential Pathogenic Entities?

doi: 10.1371/journal.pone.0017184

Figure Lengend Snippet: Helicobacteraceae species identified by sequencing.

Article Snippet: The bacterial strains used in this study included: Helicobacter bilis (ATCC 51630), H. canadensis (ATCC 700968), H. canis (ATCC 51402), H. cholecystus (ATCC 700242), H. cinaedi (CCUG 18818), H. felis (ATCC 49179), H. hepaticus (ATCC 51449), H. pullorum (NCTC 12824), H. pylori (ATCC 700392), Pseudomonas fluorescens (clinical isolate), Listeria monocytogenes (clinical isolate), Aeromonas caviae (clinical isolate), Aeromonas sobria (clinical isolate), Campylobacter jejuni (clinical isolate), Proteus mirabilis (NCTC 3177), Enterobacter aerogenes (NCIMB 10102), Yersinia enterocolitica (NCIMB 2124), Bifidobacterium longum (NCIMB 8809), Bifidobacterium infantis (DSM 20088), Eubacterium rectale (NCIMB 14373), Roseburia intestinalis (DSM 14610), Bacteroides vulgatus (DSM 1447), Bacteroides thetaiotaomicron (NCTC 10582), Eubacterium hallii (DSM 17630), Enterococcus faecalis (NCIMB 13280), Pseudomonas aeruginosa (NCIMB 8626), Enterobacter cloacae (NCIMB 8556), Proteus vulgaris (NCTC 4175), Salmonella enteritidis (NCTC 12694), Salmonella poona (NCTC 4840), Salmonella typhimurium (NCIMB 13284), Escherichia coli (NCIMB 12210), Shigella sonnei (ATCC 25931), Staphylococcus epidermidis (NCIMB 8853), Bacillus subtilis (NCIB 8054), Bacillus cereus (ATCC 10876), Klebsiella pneumoniae (NCIMB 13281), Staphylococcus aureus (NCIMB 12702), Streptococcus gordonii (ATCC 35105), Faecalibacterium prausnitzii strain A2-165 (DSM 17677), Megasphaera elsdenii (ATCC 25940), Bifidobacterium adolescentis isolate L2-32, Lactococcus lactis strain MG1363, Enterococcus faecalis strain JH2-2, Ruminococcus albus strain SY3, Ruminococcus flavefaciens strain 17, Eubacterium cylindroides strain T2-87, Coprococcus spp L2-50, Methanobrevibacter smithii ATCC 35061, Acinetobacter baumanii , Lactobacillus acidophilus (ATCC 43561) and Streptococcus bovis strain Z6 .

Techniques: Sequencing

Journal: Saudi Pharmaceutical Journal : SPJ

Article Title: Diagnosis of Genus Helicobacter through a hemi-nested PCR assay of 16S rRNA

doi: 10.1016/j.jsps.2016.04.015

Figure Lengend Snippet: The location and optimal annealing temperature of the primers in 34 type strains of Helicobacter spp. a

Article Snippet: Helicobacter cholecystus , H. strain Hkb-1/ATCC 700242 , AY686606 , 28/261/1019 , 57.5/57.9.

Techniques:

Journal: Saudi Pharmaceutical Journal : SPJ

Article Title: Diagnosis of Genus Helicobacter through a hemi-nested PCR assay of 16S rRNA

doi: 10.1016/j.jsps.2016.04.015

Figure Lengend Snippet: The location and optimal annealing temperature of the primers in 34 type strains of Helicobacter spp. a

Article Snippet: Helicobacter cholecystus , H. strain Hkb-1/ATCC 700242 , AY686606 , 28/261/1019 , 57.5/57.9.

Techniques:

Journal:

Article Title: Emergence of Diverse Helicobacter Species in the Pathogenesis of Gastric and Enterohepatic Diseases

doi: 10.1128/CMR.14.1.59-97.2001

Figure Lengend Snippet: Enterohepatic Helicobacter taxa

Article Snippet: Nonetheless, the potential importance of these emerging pathogens cannot be overlooked. table ft1 table-wrap mode="anchored" t5 TABLE 4 caption a7 Taxon Natural host Strain GenBank 16S rRNA accession no. Reference H. bilis Mouse, dog, human ATCC 51630 T U18766 161 H. canis Dog, human ATCC 5140 T L13464 375 H. cinaedi Human, hamster ATCC 35683 T M88150 397 H. cholecystus Hamster ATCC 700242 T U46129 162 H. fennelliae Human ATCC 35684 T M88154 397 H. hepaticus Mouse FRED1 L39122 23 H. muridarum Mouse, rat ATCC 49282 T M80205 248 H. pamntenis Bird, swine ATCC 51478 T M88147 76 H. pullorum Chicken, human ATCC 51801 T L36141 374 “ H. canadensis ” Human NLEP 16143 AF262037 140 H. rodentium Mouse ATCC 700285 T U96296 356 H. trogontum Rat ATCC 700114 T U65103 275 “ H. typhlonicus ” Mouse MU96-1 T AF061104 164 “ H. mesocricetorum ” Hamster MU97-1514 T AF072471 362 “ Helicobacter sp. flexispira” taxon 5 Sheep, dog, human, mouse ATCC 43966 M88137 74 “ H. mainz ” Human ATCC 51800 X81028 210 “ H. westmeadii ” Human NA a U44756 398 Helicobacter sp. cottontop Cottontop tamarin NA AF107494 345 Open in a separate window a NA, not available.

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