opacus atcc 51881 t  (ATCC)

Journal: BMC Genomics

Article Title: Characterisation of the Paenarthrobacter nicotinovorans ATCC 49919 genome and identification of several strains harbouring a highly syntenic nic -genes cluster

doi: 10.1186/s12864-023-09644-3

Figure Lengend Snippet: Phylogenetic tree and pairwise comparisons based on both dDDH (d 4 ) and ANI values of 64 genomes of Paenarthrobacter strains and of other Arthrobacter , Nocardioides, and Rhodococcus strains which possess the nic -genes. The tree was inferred with FastME 2.1.6.1 from GBDP distances calculated from genome sequences. The branch lengths were scaled in terms of GBDP distance formula d 5 . Values in blue represent GBDP pseudo-bootstrap support values > 60% from 100 replications, with an average branch support of 67.3%. The tree was rooted at the midpoint. The same tree clustering was used for both columns and rows in the heatmap. Cut-off values for species clustering was 70% for dDDH (d 4 ) and 96% for ANI. Paenarthrobacter strains mislabelled as nicotinovorans are marked with a red asterisk. Strains previously reported to harbour nic -genes are marked with a black asterisk. Strains first reported here to possess the nic -genes are marked with a blue asterisk

Article Snippet: Rhodococcus opacus , ATCC 51881 , GCF_012396235.1 , multiple contigs.

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Journal: BMC Genomics

Article Title: Characterisation of the Paenarthrobacter nicotinovorans ATCC 49919 genome and identification of several strains harbouring a highly syntenic nic -genes cluster

doi: 10.1186/s12864-023-09644-3

Figure Lengend Snippet: Genomes of strains harbouring at least 5 different nic -genes and their localization

Article Snippet: Rhodococcus opacus , ATCC 51881 , GCF_012396235.1 , multiple contigs.

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Journal: Microorganisms

Article Title: Myxobacterial Predation: A Standardised Lawn Predation Assay Highlights Strains with Unusually Efficient Predatory Activity

doi: 10.3390/microorganisms11020398

Figure Lengend Snippet: Myxobacteria strains used. DSMZ refers to strains obtained from the German Collection of Microorganisms and Cell Cultures. Myxococcus llanfairPGensis is an abbreviation of Myxococcus llanfairpwllgwyngyllgogerychwyrndrobwllllantysiliogogogochensis .

Article Snippet: , , Corallococcus exiguus DSM 14696 , DSMZ , JAAAPK000000000.

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Journal: Microorganisms

Article Title: Myxobacterial Predation: A Standardised Lawn Predation Assay Highlights Strains with Unusually Efficient Predatory Activity

doi: 10.3390/microorganisms11020398

Figure Lengend Snippet: Myxobacteria displacement, displacement ratio and swarm rate on seven phytopathogenic prey organisms. Displacement ( left ) is the diameter (mm) of the advancing swarm edge on day eight on a lawn of prey. Displacement ratio ( middle ) is calculated using Equation (1) and compensates for differences in strain-specific intrinsic swarm expansion with/without nutrients. Swarm rate ( right ) is measured as the rate (mm/day) of displacement on a lawn of prey minus the rate of displacement on non-nutrient TPM agar. Myxobacteria are ordered according to ANI similarity. From left to right, strains are: CA027, CA018, AB024B, CA023, AB022, CA010, CA006, DSM 2260, AB056, DSM 16526, CA005, DK1622, DSM 14697, CA053A, CA060A, CA032A, DSM 14698, AB055B, AB053B, CA051A, DSM 16525, DSM 14675, DSM 2259, DSM 14696, AB047A, AB047B, So ce56, AB050C.

Article Snippet: , , Corallococcus exiguus DSM 14696 , DSMZ , JAAAPK000000000.

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