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Illumina Inc 50 bp single end sequences
50 Bp Single End Sequences, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/50 bp single end sequences/product/Illumina Inc
Average 93 stars, based on 1 article reviews
Price from $9.99 to $1999.99
50 bp single end sequences - by Bioz Stars, 2020-05
93/100 stars

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Article Title: Iodine Supplemented Diet Positively Affect Immune Response and Dairy Product Quality in Fresian Cow
Article Snippet: The raw 50-bp single-end sequences (Sanger/Illumina 1.9 encoding) were quality controlled using FastQC (v.0.11.4; Babraham Institute, Cambridge, UK), and the low-quality bases (quality scores < 30) and adaptor contamination (if present) were removed by Trimmomatic v.0.36.

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    Illumina Inc hiseq 4000 system
    Sequencing data collection and analysis workflow. Two weeks prior to mate-pairing with A v y / a males, 8- to 10-wk-old wild-type a / a dams were placed on one of two experimental diet groups: (1) Control (modified, phytoestrogen-free 7% corn oil AIN-93G), or (2) Control + 50 μ g BPA / kg diet. Dietary exposure was continued through gestation and lactation until weaning at postnatal day 21. Genomic DNA was isolated from matched wild-type a / a offspring blood samples at 2, 4, and 10 months of age. DNA was isolated from a subset of Control ( n = 6 per age group) and BPA-exposed ( n = 6 per age group) mice, then processed in preparation for HsMeDIP-seq. All processed samples were amplified and sequenced on an Illumina <t>HiSeq</t> 4000 sequencer using single-end, 50 nt reads. BPA-related differentially hydroxymethylated regions (DHMRs) were identified and annotated using a bioinformatics pipeline. Annotated DHMRs were then visualized in the genome browser. The target gene region—Gnas—was then validated using RT-qPCR on available RNA from the blood samples.
    Hiseq 4000 System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 167 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/hiseq 4000 system/product/Illumina Inc
    Average 99 stars, based on 167 article reviews
    Price from $9.99 to $1999.99
    hiseq 4000 system - by Bioz Stars, 2020-05
    99/100 stars
      Buy from Supplier

    93
    Illumina Inc 50 bp single end sequencing
    Mechanisms of IAP activation in the Uhrf1 cKO cerebral cortices. ( A – D ) Confocal images of coronal sections of E14 ( A , B ) and E16 ( C , D ) control and cKO cortices immunostained for 5hmC. ( E ) Graph depicting repeat element classes in hmeDIP of E16 VZ tissue. The X -axis and Y -axis values are log 2 fold enrichment for controls and cKOs from <t>50-bp</t> single-end DNA sequencing. P -value
    50 Bp Single End Sequencing, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/50 bp single end sequencing/product/Illumina Inc
    Average 93 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    50 bp single end sequencing - by Bioz Stars, 2020-05
    93/100 stars
      Buy from Supplier

    94
    Illumina Inc illumina genome analyzer
    Efficacy of individual TR enrichment steps. Total RNA and RNA samples from each of the three sequential TR enrichment steps (anti-TMG IP, exonuclease-treatment, and TERT-binding) were analyzed by <t>Illumina</t> next-generation (Next-Gen) sequencing. Read coverage
    Illumina Genome Analyzer, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 94/100, based on 392 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/illumina genome analyzer/product/Illumina Inc
    Average 94 stars, based on 392 article reviews
    Price from $9.99 to $1999.99
    illumina genome analyzer - by Bioz Stars, 2020-05
    94/100 stars
      Buy from Supplier

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    Sequencing data collection and analysis workflow. Two weeks prior to mate-pairing with A v y / a males, 8- to 10-wk-old wild-type a / a dams were placed on one of two experimental diet groups: (1) Control (modified, phytoestrogen-free 7% corn oil AIN-93G), or (2) Control + 50 μ g BPA / kg diet. Dietary exposure was continued through gestation and lactation until weaning at postnatal day 21. Genomic DNA was isolated from matched wild-type a / a offspring blood samples at 2, 4, and 10 months of age. DNA was isolated from a subset of Control ( n = 6 per age group) and BPA-exposed ( n = 6 per age group) mice, then processed in preparation for HsMeDIP-seq. All processed samples were amplified and sequenced on an Illumina HiSeq 4000 sequencer using single-end, 50 nt reads. BPA-related differentially hydroxymethylated regions (DHMRs) were identified and annotated using a bioinformatics pipeline. Annotated DHMRs were then visualized in the genome browser. The target gene region—Gnas—was then validated using RT-qPCR on available RNA from the blood samples.

    Journal: Environmental Health Perspectives

    Article Title: Longitudinal Effects of Developmental Bisphenol A Exposure on Epigenome-Wide DNA Hydroxymethylation at Imprinted Loci in Mouse Blood

    doi: 10.1289/EHP3441

    Figure Lengend Snippet: Sequencing data collection and analysis workflow. Two weeks prior to mate-pairing with A v y / a males, 8- to 10-wk-old wild-type a / a dams were placed on one of two experimental diet groups: (1) Control (modified, phytoestrogen-free 7% corn oil AIN-93G), or (2) Control + 50 μ g BPA / kg diet. Dietary exposure was continued through gestation and lactation until weaning at postnatal day 21. Genomic DNA was isolated from matched wild-type a / a offspring blood samples at 2, 4, and 10 months of age. DNA was isolated from a subset of Control ( n = 6 per age group) and BPA-exposed ( n = 6 per age group) mice, then processed in preparation for HsMeDIP-seq. All processed samples were amplified and sequenced on an Illumina HiSeq 4000 sequencer using single-end, 50 nt reads. BPA-related differentially hydroxymethylated regions (DHMRs) were identified and annotated using a bioinformatics pipeline. Annotated DHMRs were then visualized in the genome browser. The target gene region—Gnas—was then validated using RT-qPCR on available RNA from the blood samples.

    Article Snippet: Single-end, 50 -bp reads were obtained for each library by sequencing on the HiSeq 4000 system (Illumina).

    Techniques: Sequencing, Modification, Isolation, Mouse Assay, Amplification, Quantitative RT-PCR

    Mechanisms of IAP activation in the Uhrf1 cKO cerebral cortices. ( A – D ) Confocal images of coronal sections of E14 ( A , B ) and E16 ( C , D ) control and cKO cortices immunostained for 5hmC. ( E ) Graph depicting repeat element classes in hmeDIP of E16 VZ tissue. The X -axis and Y -axis values are log 2 fold enrichment for controls and cKOs from 50-bp single-end DNA sequencing. P -value

    Journal: Genes & Development

    Article Title: Loss of Uhrf1 in neural stem cells leads to activation of retroviral elements and delayed neurodegeneration

    doi: 10.1101/gad.284992.116

    Figure Lengend Snippet: Mechanisms of IAP activation in the Uhrf1 cKO cerebral cortices. ( A – D ) Confocal images of coronal sections of E14 ( A , B ) and E16 ( C , D ) control and cKO cortices immunostained for 5hmC. ( E ) Graph depicting repeat element classes in hmeDIP of E16 VZ tissue. The X -axis and Y -axis values are log 2 fold enrichment for controls and cKOs from 50-bp single-end DNA sequencing. P -value

    Article Snippet: Quality control was carried out with a Bioanalyzer (Agilent), and 50-bp single-end sequencing was performed with a HiSeq sequencer (Illumina) at LAFUGA.

    Techniques: Activation Assay, DNA Sequencing

    Efficacy of individual TR enrichment steps. Total RNA and RNA samples from each of the three sequential TR enrichment steps (anti-TMG IP, exonuclease-treatment, and TERT-binding) were analyzed by Illumina next-generation (Next-Gen) sequencing. Read coverage

    Journal: RNA

    Article Title: Identification of purple sea urchin telomerase RNA using a next-generation sequencing based approach

    doi: 10.1261/rna.039131.113

    Figure Lengend Snippet: Efficacy of individual TR enrichment steps. Total RNA and RNA samples from each of the three sequential TR enrichment steps (anti-TMG IP, exonuclease-treatment, and TERT-binding) were analyzed by Illumina next-generation (Next-Gen) sequencing. Read coverage

    Article Snippet: A cDNA library was constructed from extracted TERT-bound RNA and a single-end 50-bp sequencing run on an Illumina Genome Analyzer performed by Cofactor Genomics.

    Techniques: Binding Assay, Sequencing