Journal: FEMS Microbiology Ecology

Article Title: Identification of phenol- and p -cresol-producing intestinal bacteria by using media supplemented with tyrosine and its metabolites

doi: 10.1093/femsec/fiy125

Figure Lengend Snippet: Bacterial strains used in this study, and culture conditions

Article Snippet: 24 , Bifidobacterium longum subsp. infantis , YIT 4018 T = ATCC 15697 T , modified PYG broth.

Techniques: Modification

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Bacterial growth while utilizing cranberry xyloglucans. Growth curves of B. longum subsp. longum UCD401, L. plantarum ATCC BAA-793, L. johnsonii ATCC 33200, and B. longum subsp. infantis ATCC 15697 and JCM 1260 grown on mMRS medium containing 2% (wt/vol) xyloglucans. The curves are drawn from an average of three independent experiments.

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques:

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Analysis of bacterial growth kinetics calculated with Wolfram Mathematica 10.3

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques:

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Bacterial fermentative end products of cranberry xyloglucan utilization. Shown are lactate (a), acetate (b), and formate (c) production; acetate/lactate ratios (d); and formate/lactate ratios (e). Bl, B. longum subsp. longum UCD401; Lp, Lactobacillus plantarum ATCC BAA-793. Averages of independent biological triplicates are shown, and bars represent the standard deviation of the mean. Organic acid production is expressed in millimolar absolute concentrations. Asterisks represent significant differences determined by two-way ANOVA and Sidak's multiple-comparison test (P < 0.05).

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques: Standard Deviation

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Bacterial growth on additional fractions of cranberry xyloglucans. Growth curves represent B. longum subsp. infantis ATCC 15697, JCM 1260, JCM 1272, and JCM 7007; B. longum subsp. longum JCM 11347, ATCC 15708, and UCD401; Lactobacillus plantarum ATCC BAA-793; and Lactobacillus johnsonii ATCC 33200 grown on mMRS medium containing 2% (wt/vol) xyloglucan fraction A2 (a) or 2% (wt/vol) xyloglucan fraction A6 (b). The curves are drawn from the average of at least three independent experiments, with the exception of strains JCM 1260, JCM 7007, JCM 11347, and JCM 15708 which are based on duplicates in panel a.

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques:

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Kinetic analysis of bacterial growth on A2 and A6 fraction xyloglucans calculated with Wolfram Mathematica 10.3

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques:

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Bifidobacterial fermentative end products of cranberry fraction A6 utilization. (a to c) Lactate (a), acetate (b), and formate (c) production while B. longum subsp. infantis JCM 1260 and B. longum subsp. longum UCD401 utilize xyloglucan fraction A6. (d) Acetate:lactate ratio after fermentation. Averages of independent biological triplicates are shown, and bars represent the standard deviation of the mean. Asterisks represent significant differences evaluated by two-way ANOVA and Sidak's multiple-comparison test (P < 0.05).

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques: Standard Deviation

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Gene expression of B. longum subsp. longum UCD401 while utilizing cranberry fraction A6 as a sole carbon source. Genes in the arabinose cluster of B. longum subsp. longum UCD401 predicted to participate in xyloglucan metabolism are depicted on the x axis. Expression of four GH family genes (those for α-l-arabinofuranosidase, C-terminal [BL_0405], arabinan endo-1,5-α-l-arabinosidase [BL_0404, BL_0403], β-xylosidase [BL_0402]) (a) and those for a carbohydrate ABC transporter substrate-binding protein (BL_0398) and carbohydrate ABC transporter membrane proteins (BL_0397, BL_0396) (b) is shown as fold change relative to the control (glucose). Averages of independent biological triplicates are shown, and bars represent the standard deviation of the mean. Asterisks (* and **) represent significant differences compared to the control (glucose), evaluated by paired t test (P values of <0.05 and <0.005, respectively).

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques: Expressing, Binding Assay, Standard Deviation

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Growth kinetics of strains during syntrophic interaction

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques:

Journal: Applied and Environmental Microbiology

Article Title: A Human Gut Commensal Ferments Cranberry Carbohydrates To Produce Formate

doi: 10.1128/AEM.01097-17

Figure Lengend Snippet: Bacterial syntrophic interactions modeled with cranberry xyloglucans. Growth curves of B. longum subsp. infantis ATCC 15697 on mMRS medium containing xyloglucans (green) and supernatants from B. longum subsp. longum UCD401 (orange), L. plantarum ATCC BAA-793 (blue), and L. johnsonii ATCC 33200 (yellow) after xyloglucan fermentation. The curves are drawn from an average of three independent experiments.

Article Snippet: ATCC 15697 , B. longum subsp. infantis , Human infant feces.

Techniques:

Journal: BMC Complementary and Alternative Medicine

Article Title: Relationship between total phenolic contents and biological properties of propolis from 20 different regions in South Korea

doi: 10.1186/s12906-016-1043-y

Figure Lengend Snippet: List of human intestinal bacteria tested for growth inhibitory activity

Article Snippet: B. infantis ATCC 25962 b , 2 , P12 (14.7), P19 (14.7), CF d (0.031).

Techniques:

Journal: BMC Complementary and Alternative Medicine

Article Title: Relationship between total phenolic contents and biological properties of propolis from 20 different regions in South Korea

doi: 10.1186/s12906-016-1043-y

Figure Lengend Snippet: Minimal inhibitory concentrations (MICs) of Korean propolis ethanol extracts and a commercial antibiotic ciprofloxacin toward four harmful and two nonpathogenic intestinal bacteria

Article Snippet: B. infantis ATCC 25962 b , 2 , P12 (14.7), P19 (14.7), CF d (0.031).

Techniques:

Journal: BMC Complementary and Alternative Medicine

Article Title: Relationship between total phenolic contents and biological properties of propolis from 20 different regions in South Korea

doi: 10.1186/s12906-016-1043-y

Figure Lengend Snippet: List of human intestinal bacteria tested for growth inhibitory activity

Article Snippet: The MIC of EEPs from P12 and P19 was 14.7 mg/mL toward B. infantis ATCC 25962 and 14.7 and 7.4 mg/mL toward C. butyricum ATCC 25779, respectively (ciprofloxacin, 0.031 mg/mL).

Techniques:

Journal: BMC Complementary and Alternative Medicine

Article Title: Relationship between total phenolic contents and biological properties of propolis from 20 different regions in South Korea

doi: 10.1186/s12906-016-1043-y

Figure Lengend Snippet: Minimal inhibitory concentrations (MICs) of Korean propolis ethanol extracts and a commercial antibiotic ciprofloxacin toward four harmful and two nonpathogenic intestinal bacteria

Article Snippet: The MIC of EEPs from P12 and P19 was 14.7 mg/mL toward B. infantis ATCC 25962 and 14.7 and 7.4 mg/mL toward C. butyricum ATCC 25779, respectively (ciprofloxacin, 0.031 mg/mL).

Techniques: